RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CSDC2Q9Y534 153 aaKnown RBP3.39□□□□□ -1.87
CD47-201ENST00000355354 PSCAO43653 123 aa3.39□□□□□ -1.87
CD47-201ENST00000355354 Q5W150 140 aa3.39□□□□□ -1.87
CD47-201ENST00000355354 LINC00575Q6W349 94 aa3.39□□□□□ -1.87
CD47-201ENST00000355354 LINC00528Q8N1L1 170 aa3.39□□□□□ -1.87
CD47-201ENST00000355354 TRAV13-2A0A0B4J235 113 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 TRBV7-4A0A0J9YYF1 115 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 F8WDY8 70 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 ZNF561-AS1K7EIQ3 104 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 F8WEM9 126 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 TNP2Q05952 138 aa3.38□□□□□ -1.87
CD47-201ENST00000355354 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
CD47-201ENST00000355354 Q8N1X5 172 aa3.37□□□□□ -1.87
CD47-201ENST00000355354 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
CD47-201ENST00000355354 Q6JHZ5 121 aa3.37□□□□□ -1.87
CD47-201ENST00000355354 IGKV4-1P06312 121 aa3.36□□□□□ -1.87
CD47-201ENST00000355354 INAFM2P0DMQ5 153 aa3.36□□□□□ -1.87
CD47-201ENST00000355354 SPAG11BQ08648 103 aa3.36□□□□□ -1.87
CD47-201ENST00000355354 PRO0255Q9UI72 69 aa3.36□□□□□ -1.87
CD47-201ENST00000355354 PHF5AQ7RTV0 110 aaKnown RBP3.36□□□□□ -1.87
CD47-201ENST00000355354 OCR1Q9BZK8 76 aa3.36□□□□□ -1.87
CD47-201ENST00000355354 M0R378 163 aa3.35□□□□□ -1.87
CD47-201ENST00000355354 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
CD47-201ENST00000355354 NKAPP1Q8N9T2 125 aa3.35□□□□□ -1.87
CD47-201ENST00000355354 H3BT86 120 aa3.34□□□□□ -1.87
CD47-201ENST00000355354 C1orf43Q9BWL3 253 aa3.34□□□□□ -1.87
CD47-201ENST00000355354 LINC00167Q96N53 147 aa3.34□□□□□ -1.87
CD47-201ENST00000355354 H0YGX0 51 aa3.34□□□□□ -1.87
CD47-201ENST00000355354 MT1HL1P0DM35 61 aa3.34□□□□□ -1.87
CD47-201ENST00000355354 MPLKIPQ8TAP9 179 aa3.33□□□□□ -1.88
CD47-201ENST00000355354 KRTAP10-2P60368 255 aa3.33□□□□□ -1.88
CD47-201ENST00000355354 COX7CP15954 63 aa3.33□□□□□ -1.88
CD47-201ENST00000355354 MOBPQ13875 183 aa3.32□□□□□ -1.88
CD47-201ENST00000355354 ACYP1P07311 99 aa3.32□□□□□ -1.88
CD47-201ENST00000355354 SCGB1A1P11684 91 aa3.32□□□□□ -1.88
CD47-201ENST00000355354 PDE6GP18545 87 aa3.32□□□□□ -1.88
CD47-201ENST00000355354 A0A1B0GUV1 79 aa3.31□□□□□ -1.88
CD47-201ENST00000355354 C9orf153Q5TBE3 101 aa3.31□□□□□ -1.88
CD47-201ENST00000355354 TIMM17BO60830 172 aa3.31□□□□□ -1.88
CD47-201ENST00000355354 CCKP06307 115 aa3.31□□□□□ -1.88
CD47-201ENST00000355354 C11orf45Q8TAV5 145 aa3.31□□□□□ -1.88
CD47-201ENST00000355354 KRTAP29-1A8MX34 341 aaPredicted RBP3.31□□□□□ -1.88
CD47-201ENST00000355354 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 Q8IZM0 81 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 SVIPQ8NHG7 77 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 TRACP01848 142 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 LINC00643Q86TS7 51 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 CRYGAP11844 174 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 H3BNG1 76 aa3.3□□□□□ -1.88
CD47-201ENST00000355354 ZNF73O43830 326 aaPredicted RBP3.3□□□□□ -1.88
CD47-201ENST00000355354 PSPHP1O15172 72 aa3.29□□□□□ -1.88
CD47-201ENST00000355354 FAM240AA0A1B0GVK7 77 aa3.29□□□□□ -1.88
CD47-201ENST00000355354 LCE2AQ5TA79 106 aaPredicted RBP3.29□□□□□ -1.88
CD47-201ENST00000355354 COX17Q14061 63 aa3.28□□□□□ -1.88
CD47-201ENST00000355354 Q96NJ1 140 aa3.28□□□□□ -1.88
CD47-201ENST00000355354 CAMK2N2Q96S95 79 aa3.28□□□□□ -1.88
CD47-201ENST00000355354 IGKV2D-24A0A075B6R9 120 aa3.28□□□□□ -1.88
CD47-201ENST00000355354 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
CD47-201ENST00000355354 JMJD7-PLA2G4BH0Y9G9 81 aa3.28□□□□□ -1.89
CD47-201ENST00000355354 WFDC13Q8IUB5 93 aa3.28□□□□□ -1.89
CD47-201ENST00000355354 LAMTOR3Q9UHA4 124 aa3.28□□□□□ -1.89
CD47-201ENST00000355354 IGFL1Q6UW32 110 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 LCA10Q71F78 164 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 ORMDL1Q9P0S3 153 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 KLKP1Q107X0 134 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
CD47-201ENST00000355354 ZCCHC13Q8WW36 166 aaKnown RBP3.27□□□□□ -1.89
CD47-201ENST00000355354 UBL5Q9BZL1 73 aa3.27□□□□□ -1.89
CD47-201ENST00000355354 A0A087WSZ3 146 aa3.26□□□□□ -1.89
CD47-201ENST00000355354 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
CD47-201ENST00000355354 ETDCA0A1B0GVM5 59 aa3.26□□□□□ -1.89
CD47-201ENST00000355354 ELOF1P60002 83 aaKnown RBP3.26□□□□□ -1.89
CD47-201ENST00000355354 Q8N9P0 234 aaPredicted RBP3.26□□□□□ -1.89
CD47-201ENST00000355354 DEFB131BA0A096LNP1 70 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 SPRR1AP35321 89 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 CNBPP62633 177 aaKnown RBP3.25□□□□□ -1.89
CD47-201ENST00000355354 DIRC1Q969H9 104 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 RETNLBQ9BQ08 111 aa3.25□□□□□ -1.89
CD47-201ENST00000355354 A8MUN3 132 aa3.24□□□□□ -1.89
CD47-201ENST00000355354 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
CD47-201ENST00000355354 UBE2BP63146 152 aa3.24□□□□□ -1.89
CD47-201ENST00000355354 TMEM256-PLSCR3K7ERE1 68 aa3.24□□□□□ -1.89
CD47-201ENST00000355354 ATP5EP2Q5VTU8 51 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 SERP2Q8N6R1 65 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 IGLV1-50A0A075B6I6 118 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 UQCRQO14949 82 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 LY6G6CO95867 125 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 CRIPTQ9P021 101 aa3.23□□□□□ -1.89
CD47-201ENST00000355354 IGLV5-48A0A075B6I7 105 aa3.22□□□□□ -1.89
CD47-201ENST00000355354 NBDYA0A0U1RRE5 68 aa3.22□□□□□ -1.89
CD47-201ENST00000355354 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
CD47-201ENST00000355354 COX7BP24311 80 aa3.22□□□□□ -1.89
CD47-201ENST00000355354 NDUFB1O75438 58 aa3.21□□□□□ -1.89
CD47-201ENST00000355354 TMEM254Q8TBM7 123 aa3.21□□□□□ -1.9
CD47-201ENST00000355354 UBE2AP49459 152 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms