RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MEGF8Q7Z7M0 2845 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
CASC4-202ENST00000345795 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
CASC4-202ENST00000345795 TMEM254Q8TBM7 123 aa8.35□□□□□ -1.07
CASC4-202ENST00000345795 J3KT08 172 aa8.35□□□□□ -1.07
CASC4-202ENST00000345795 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
CASC4-202ENST00000345795 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
CASC4-202ENST00000345795 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
CASC4-202ENST00000345795 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
CASC4-202ENST00000345795 MP68P56378 58 aa8.32□□□□□ -1.08
CASC4-202ENST00000345795 SVIPQ8NHG7 77 aa8.32□□□□□ -1.08
CASC4-202ENST00000345795 TLX1NBP0CAT3 122 aa8.32□□□□□ -1.08
CASC4-202ENST00000345795 CXCL6P80162 114 aa8.31□□□□□ -1.08
CASC4-202ENST00000345795 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
CASC4-202ENST00000345795 F8WDY8 70 aa8.3□□□□□ -1.08
CASC4-202ENST00000345795 LINC01600Q96MT4 127 aa8.29□□□□□ -1.08
CASC4-202ENST00000345795 BCE1O60756 84 aa8.28□□□□□ -1.08
CASC4-202ENST00000345795 HCG22E2RYF7 251 aa8.28□□□□□ -1.08
CASC4-202ENST00000345795 LYSTQ99698 3801 aa8.27□□□□□ -1.08
CASC4-202ENST00000345795 SPACA4Q8TDM5 124 aa8.27□□□□□ -1.09
CASC4-202ENST00000345795 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
CASC4-202ENST00000345795 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
CASC4-202ENST00000345795 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
CASC4-202ENST00000345795 CRYGAP11844 174 aa8.26□□□□□ -1.09
CASC4-202ENST00000345795 TMEM258P61165 79 aa8.26□□□□□ -1.09
CASC4-202ENST00000345795 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
CASC4-202ENST00000345795 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
CASC4-202ENST00000345795 IGLV5-48A0A075B6I7 105 aa8.22□□□□□ -1.09
CASC4-202ENST00000345795 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.09
CASC4-202ENST00000345795 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.1
CASC4-202ENST00000345795 DSCR10P59022 87 aa8.2□□□□□ -1.1
CASC4-202ENST00000345795 DNAH10Q8IVF4 4471 aa8.2□□□□□ -1.1
CASC4-202ENST00000345795 H0Y9P7 68 aa8.2□□□□□ -1.1
CASC4-202ENST00000345795 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
CASC4-202ENST00000345795 KRTAP4-16G5E9R7 235 aaPredicted RBP8.19□□□□□ -1.1
CASC4-202ENST00000345795 SPRR1AP35321 89 aa8.19□□□□□ -1.1
CASC4-202ENST00000345795 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
CASC4-202ENST00000345795 DNHD1Q96M86 4753 aa8.19□□□□□ -1.1
CASC4-202ENST00000345795 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
CASC4-202ENST00000345795 PSPHP1O15172 72 aa8.18□□□□□ -1.1
CASC4-202ENST00000345795 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
CASC4-202ENST00000345795 HUWE1Q7Z6Z7 4374 aaKnown RBP8.16□□□□□ -1.1
CASC4-202ENST00000345795 H7BZZ5 65 aa8.15□□□□□ -1.1
CASC4-202ENST00000345795 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
CASC4-202ENST00000345795 hDV103S1A0JD37 113 aa8.15□□□□□ -1.1
CASC4-202ENST00000345795 ZNF861PO60384 105 aa8.15□□□□□ -1.11
CASC4-202ENST00000345795 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
CASC4-202ENST00000345795 C1orf64Q8NEQ6 169 aa8.13□□□□□ -1.11
CASC4-202ENST00000345795 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
CASC4-202ENST00000345795 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
CASC4-202ENST00000345795 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
CASC4-202ENST00000345795 IGLV7-43P04211 117 aa8.09□□□□□ -1.12
CASC4-202ENST00000345795 IGKV2D-30A0A075B6S6 120 aa8.08□□□□□ -1.12
CASC4-202ENST00000345795 IGKV2-30P06310 120 aa8.08□□□□□ -1.12
CASC4-202ENST00000345795 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
CASC4-202ENST00000345795 SPINK1P00995 79 aa8.07□□□□□ -1.12
CASC4-202ENST00000345795 A8MWP4 228 aa8.07□□□□□ -1.12
CASC4-202ENST00000345795 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
CASC4-202ENST00000345795 OXTP01178 125 aa8.06□□□□□ -1.12
CASC4-202ENST00000345795 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
CASC4-202ENST00000345795 TYMSOSQ8TAI1 123 aa8.03□□□□□ -1.12
CASC4-202ENST00000345795 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
CASC4-202ENST00000345795 NDUFC1O43677 76 aa8.02□□□□□ -1.12
CASC4-202ENST00000345795 A0A087X002 238 aa8.02□□□□□ -1.13
CASC4-202ENST00000345795 C9orf92A6NGG3 77 aa8.02□□□□□ -1.13
CASC4-202ENST00000345795 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
CASC4-202ENST00000345795 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
CASC4-202ENST00000345795 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
CASC4-202ENST00000345795 PRKDCP78527 4128 aaKnown RBP8.02□□□□□ -1.13
CASC4-202ENST00000345795 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
CASC4-202ENST00000345795 PLECQ15149 4684 aaKnown RBP8.01□□□□□ -1.13
CASC4-202ENST00000345795 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
CASC4-202ENST00000345795 Q6ZR54 194 aa8□□□□□ -1.13
CASC4-202ENST00000345795 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
CASC4-202ENST00000345795 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
CASC4-202ENST00000345795 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
CASC4-202ENST00000345795 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.13
CASC4-202ENST00000345795 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
CASC4-202ENST00000345795 Q96NJ1 140 aa7.95□□□□□ -1.14
CASC4-202ENST00000345795 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
CASC4-202ENST00000345795 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CASC4-202ENST00000345795 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
CASC4-202ENST00000345795 LINC00313P59037 77 aa7.93□□□□□ -1.14
CASC4-202ENST00000345795 DNAH9Q9NYC9 4486 aa7.93□□□□□ -1.14
CASC4-202ENST00000345795 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
CASC4-202ENST00000345795 IGLV8-61A0A075B6I0 122 aa7.91□□□□□ -1.14
CASC4-202ENST00000345795 STARD9Q9P2P6 4700 aa7.91□□□□□ -1.14
CASC4-202ENST00000345795 DNAH7Q8WXX0 4024 aa7.9□□□□□ -1.14
CASC4-202ENST00000345795 KMT2AQ03164 3969 aa7.9□□□□□ -1.15
CASC4-202ENST00000345795 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CASC4-202ENST00000345795 A0A1B0GW54 56 aa7.89□□□□□ -1.15
CASC4-202ENST00000345795 A8MUN3 132 aa7.89□□□□□ -1.15
CASC4-202ENST00000345795 A6NED7 52 aa7.88□□□□□ -1.15
CASC4-202ENST00000345795 LINC00336Q6ZUF6 198 aa7.87□□□□□ -1.15
CASC4-202ENST00000345795 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
CASC4-202ENST00000345795 SPRR1BP22528 89 aa7.83□□□□□ -1.16
CASC4-202ENST00000345795 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
CASC4-202ENST00000345795 ATP5EP56381 51 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms