RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SPEGQ15772 3267 aa5.13□□□□□ -1.59
UBE4B-202ENST00000343090 FRYLO94915 3013 aa5.12□□□□□ -1.59
UBE4B-202ENST00000343090 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
UBE4B-202ENST00000343090 CR1P17927 2039 aa5.12□□□□□ -1.59
UBE4B-202ENST00000343090 APLNQ9ULZ1 77 aa5.12□□□□□ -1.59
UBE4B-202ENST00000343090 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
UBE4B-202ENST00000343090 GCN1Q92616 2671 aaKnown RBP5.12□□□□□ -1.59
UBE4B-202ENST00000343090 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
UBE4B-202ENST00000343090 KALRNO60229 2985 aa5.11□□□□□ -1.59
UBE4B-202ENST00000343090 COL6A3P12111 3177 aa5.1□□□□□ -1.59
UBE4B-202ENST00000343090 CNBPP62633 177 aaKnown RBP5.1□□□□□ -1.59
UBE4B-202ENST00000343090 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
UBE4B-202ENST00000343090 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
UBE4B-202ENST00000343090 UQCR11O14957 56 aa5.1□□□□□ -1.59
UBE4B-202ENST00000343090 CRIPTQ9P021 101 aa5.1□□□□□ -1.59
UBE4B-202ENST00000343090 SMR3BP02814 79 aaPredicted RBP5.09□□□□□ -1.59
UBE4B-202ENST00000343090 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
UBE4B-202ENST00000343090 SSBP3-AS1Q7Z2R9 100 aa5.09□□□□□ -1.59
UBE4B-202ENST00000343090 TEX15Q9BXT5 2789 aa5.09□□□□□ -1.6
UBE4B-202ENST00000343090 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
UBE4B-202ENST00000343090 LINC00304Q8N9R0 145 aa5.08□□□□□ -1.6
UBE4B-202ENST00000343090 NBEAL2Q6ZNJ1 2754 aa5.08□□□□□ -1.6
UBE4B-202ENST00000343090 IGLV7-43P04211 117 aa5.08□□□□□ -1.6
UBE4B-202ENST00000343090 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
UBE4B-202ENST00000343090 TEP1Q99973 2627 aaKnown RBP5.08□□□□□ -1.6
UBE4B-202ENST00000343090 IGLV7-46A0A075B6I9 117 aa5.06□□□□□ -1.6
UBE4B-202ENST00000343090 SPTBN5Q9NRC6 3674 aaKnown RBP5.06□□□□□ -1.6
UBE4B-202ENST00000343090 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
UBE4B-202ENST00000343090 ATMQ13315 3056 aa5.06□□□□□ -1.6
UBE4B-202ENST00000343090 PRR26Q8N8Z3 221 aa5.05□□□□□ -1.6
UBE4B-202ENST00000343090 LINC01558Q9Y6Z2 57 aa5.05□□□□□ -1.6
UBE4B-202ENST00000343090 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
UBE4B-202ENST00000343090 SPINK7P58062 85 aa5.04□□□□□ -1.6
UBE4B-202ENST00000343090 UNC79Q9P2D8 2635 aa5.04□□□□□ -1.6
UBE4B-202ENST00000343090 LRBAP50851 2863 aa5.04□□□□□ -1.6
UBE4B-202ENST00000343090 IGSF10Q6WRI0 2623 aa5.04□□□□□ -1.6
UBE4B-202ENST00000343090 EYSQ5T1H1 3165 aa5.03□□□□□ -1.6
UBE4B-202ENST00000343090 A8MU10 97 aa5.02□□□□□ -1.61
UBE4B-202ENST00000343090 TNP2Q05952 138 aa5.01□□□□□ -1.61
UBE4B-202ENST00000343090 Q8N1X5 172 aa5.01□□□□□ -1.61
UBE4B-202ENST00000343090 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
UBE4B-202ENST00000343090 NOTCH1P46531 2555 aa5□□□□□ -1.61
UBE4B-202ENST00000343090 SETXQ7Z333 2677 aaKnown RBP4.99□□□□□ -1.61
UBE4B-202ENST00000343090 DMXL2Q8TDJ6 3036 aa4.99□□□□□ -1.61
UBE4B-202ENST00000343090 TACC2O95359 2948 aa4.99□□□□□ -1.61
UBE4B-202ENST00000343090 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
UBE4B-202ENST00000343090 HRES1P13985 223 aa4.98□□□□□ -1.61
UBE4B-202ENST00000343090 CFAP47Q6ZTR5 3102 aa4.98□□□□□ -1.61
UBE4B-202ENST00000343090 MYO15AQ9UKN7 3530 aa4.98□□□□□ -1.61
UBE4B-202ENST00000343090 UBR5O95071 2799 aaPredicted RBP4.98□□□□□ -1.61
UBE4B-202ENST00000343090 A6NN06 94 aa4.97□□□□□ -1.61
UBE4B-202ENST00000343090 SPRR1AP35321 89 aa4.97□□□□□ -1.61
UBE4B-202ENST00000343090 KRTAP1-5Q9BYS1 174 aa4.97□□□□□ -1.61
UBE4B-202ENST00000343090 COL6A5A8TX70 2615 aa4.97□□□□□ -1.61
UBE4B-202ENST00000343090 REV3LO60673 3130 aa4.97□□□□□ -1.61
UBE4B-202ENST00000343090 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.61
UBE4B-202ENST00000343090 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
UBE4B-202ENST00000343090 FLNCQ14315 2725 aa4.96□□□□□ -1.62
UBE4B-202ENST00000343090 MMP24-AS1A0A0U1RRL7 71 aa4.95□□□□□ -1.62
UBE4B-202ENST00000343090 USP34Q70CQ2 3546 aa4.95□□□□□ -1.62
UBE4B-202ENST00000343090 STAB1Q9NY15 2570 aa4.95□□□□□ -1.62
UBE4B-202ENST00000343090 ITPR1Q14643 2758 aa4.95□□□□□ -1.62
UBE4B-202ENST00000343090 NBEAL1Q6ZS30 2694 aa4.94□□□□□ -1.62
UBE4B-202ENST00000343090 LCE6AA0A183 80 aa4.93□□□□□ -1.62
UBE4B-202ENST00000343090 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
UBE4B-202ENST00000343090 ZZEF1O43149 2961 aa4.92□□□□□ -1.62
UBE4B-202ENST00000343090 ASH1LQ9NR48 2969 aaKnown RBP4.92□□□□□ -1.62
UBE4B-202ENST00000343090 A0A0D9SG42 100 aa4.91□□□□□ -1.62
UBE4B-202ENST00000343090 Q6ZSA8 131 aa4.91□□□□□ -1.62
UBE4B-202ENST00000343090 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
UBE4B-202ENST00000343090 PLAC8Q9NZF1 115 aa4.89□□□□□ -1.63
UBE4B-202ENST00000343090 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
UBE4B-202ENST00000343090 LOC400499M0QZD8 3231 aa4.88□□□□□ -1.63
UBE4B-202ENST00000343090 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
UBE4B-202ENST00000343090 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
UBE4B-202ENST00000343090 M0R2T5 61 aa4.88□□□□□ -1.63
UBE4B-202ENST00000343090 DMXL1Q9Y485 3027 aa4.87□□□□□ -1.63
UBE4B-202ENST00000343090 SPRR1BP22528 89 aa4.87□□□□□ -1.63
UBE4B-202ENST00000343090 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
UBE4B-202ENST00000343090 PANO1I0J062 215 aa4.86□□□□□ -1.63
UBE4B-202ENST00000343090 UTP20O75691 2785 aaKnown RBP4.86□□□□□ -1.63
UBE4B-202ENST00000343090 TNRC18O15417 2968 aaPredicted RBP4.84□□□□□ -1.63
UBE4B-202ENST00000343090 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
UBE4B-202ENST00000343090 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
UBE4B-202ENST00000343090 Q5W150 140 aa4.83□□□□□ -1.64
UBE4B-202ENST00000343090 NSD1Q96L73 2696 aaPredicted RBP4.82□□□□□ -1.64
UBE4B-202ENST00000343090 ITPR2Q14571 2701 aa4.82□□□□□ -1.64
UBE4B-202ENST00000343090 ASB16-AS1Q495Z4 193 aa4.82□□□□□ -1.64
UBE4B-202ENST00000343090 KRTAP10-2P60368 255 aa4.8□□□□□ -1.64
UBE4B-202ENST00000343090 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
UBE4B-202ENST00000343090 WDFY3Q8IZQ1 3526 aa4.8□□□□□ -1.64
UBE4B-202ENST00000343090 Q6ZR54 194 aa4.8□□□□□ -1.64
UBE4B-202ENST00000343090 ZANQ9Y493 2812 aa4.8□□□□□ -1.64
UBE4B-202ENST00000343090 A0A1B0GU33 70 aa4.79□□□□□ -1.64
UBE4B-202ENST00000343090 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
UBE4B-202ENST00000343090 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
UBE4B-202ENST00000343090 CELSR2Q9HCU4 2923 aa4.77□□□□□ -1.65
UBE4B-202ENST00000343090 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
UBE4B-202ENST00000343090 STAB2Q8WWQ8 2551 aa4.77□□□□□ -1.65
UBE4B-202ENST00000343090 HRNRQ86YZ3 2850 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms