RNA–Protein interactions for RNA: ENST00000342665.4

SOX12-201, Transcript of SRY-box 12, humanhuman

APPRIS P1 BASIC

Gene SOX12, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12-201ENST00000342665 ANAPC11Q9NYG5 84 aa12.78□□□□□ -0.36
SOX12-201ENST00000342665 ATMQ13315 3056 aa12.76□□□□□ -0.37
SOX12-201ENST00000342665 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
SOX12-201ENST00000342665 CYP4F30PQ9H0H9 118 aa12.76□□□□□ -0.37
SOX12-201ENST00000342665 DSCR10P59022 87 aa12.75□□□□□ -0.37
SOX12-201ENST00000342665 OCR1Q9BZK8 76 aa12.74□□□□□ -0.37
SOX12-201ENST00000342665 ATP11AUNQ6ZP68 121 aa12.71□□□□□ -0.38
SOX12-201ENST00000342665 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
SOX12-201ENST00000342665 SPRR1AP35321 89 aa12.66□□□□□ -0.38
SOX12-201ENST00000342665 LINC00336Q6ZUF6 198 aa12.66□□□□□ -0.38
SOX12-201ENST00000342665 SPANXA2-OT1Q8N9U9 137 aa12.66□□□□□ -0.38
SOX12-201ENST00000342665 EYSQ5T1H1 3165 aa12.66□□□□□ -0.38
SOX12-201ENST00000342665 LINC00304Q8N9R0 145 aa12.65□□□□□ -0.38
SOX12-201ENST00000342665 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
SOX12-201ENST00000342665 TACC2O95359 2948 aa12.64□□□□□ -0.39
SOX12-201ENST00000342665 COL12A1Q99715 3063 aa12.64□□□□□ -0.39
SOX12-201ENST00000342665 IGLV8-61A0A075B6I0 122 aa12.62□□□□□ -0.39
SOX12-201ENST00000342665 CFAP47Q6ZTR5 3102 aa12.6□□□□□ -0.39
SOX12-201ENST00000342665 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
SOX12-201ENST00000342665 ZZEF1O43149 2961 aa12.57□□□□□ -0.4
SOX12-201ENST00000342665 UQCR11O14957 56 aa12.57□□□□□ -0.4
SOX12-201ENST00000342665 KRTAP26-1Q6PEX3 210 aa12.57□□□□□ -0.4
SOX12-201ENST00000342665 LRBAP50851 2863 aa12.56□□□□□ -0.4
SOX12-201ENST00000342665 NSD1Q96L73 2696 aaPredicted RBP12.56□□□□□ -0.4
SOX12-201ENST00000342665 TNP2Q05952 138 aa12.52□□□□□ -0.41
SOX12-201ENST00000342665 REV3LO60673 3130 aa12.52□□□□□ -0.41
SOX12-201ENST00000342665 SMR3BP02814 79 aaPredicted RBP12.52□□□□□ -0.41
SOX12-201ENST00000342665 CD164Q04900 197 aa12.5□□□□□ -0.41
SOX12-201ENST00000342665 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
SOX12-201ENST00000342665 SPRR1BP22528 89 aa12.46□□□□□ -0.42
SOX12-201ENST00000342665 SPTBN5Q9NRC6 3674 aaKnown RBP12.44□□□□□ -0.42
SOX12-201ENST00000342665 C9orf92A6NGG3 77 aa12.44□□□□□ -0.42
SOX12-201ENST00000342665 CYSTM1Q9H1C7 97 aa12.43□□□□□ -0.42
SOX12-201ENST00000342665 KRTAP1-5Q9BYS1 174 aa12.42□□□□□ -0.42
SOX12-201ENST00000342665 STAB2Q8WWQ8 2551 aa12.41□□□□□ -0.42
SOX12-201ENST00000342665 MIR22HGQ0VDD5 57 aa12.41□□□□□ -0.42
SOX12-201ENST00000342665 PLAC8Q9NZF1 115 aa12.41□□□□□ -0.42
SOX12-201ENST00000342665 ASH1LQ9NR48 2969 aaKnown RBP12.39□□□□□ -0.43
SOX12-201ENST00000342665 IGLV7-46A0A075B6I9 117 aa12.38□□□□□ -0.43
SOX12-201ENST00000342665 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
SOX12-201ENST00000342665 Q1T7F1 81 aa12.38□□□□□ -0.43
SOX12-201ENST00000342665 UTP20O75691 2785 aaKnown RBP12.37□□□□□ -0.43
SOX12-201ENST00000342665 BAHCC1Q9P281 2608 aa12.37□□□□□ -0.43
SOX12-201ENST00000342665 PRR26Q8N8Z3 221 aa12.36□□□□□ -0.43
SOX12-201ENST00000342665 LINC00472Q9H8W2 130 aa12.35□□□□□ -0.43
SOX12-201ENST00000342665 MYO15AQ9UKN7 3530 aa12.35□□□□□ -0.43
SOX12-201ENST00000342665 LOC400499M0QZD8 3231 aa12.34□□□□□ -0.43
SOX12-201ENST00000342665 FAM229BQ4G0N7 80 aa12.32□□□□□ -0.44
SOX12-201ENST00000342665 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
SOX12-201ENST00000342665 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
SOX12-201ENST00000342665 Q8N1X5 172 aa12.28□□□□□ -0.44
SOX12-201ENST00000342665 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.45
SOX12-201ENST00000342665 CDC42SE1Q9NRR8 79 aa12.26□□□□□ -0.45
SOX12-201ENST00000342665 NIPBLQ6KC79 2804 aaeCLIP12.26□□□□□ -0.459e-7■■■□□ 16.7
SOX12-201ENST00000342665 HRES1P13985 223 aa12.23□□□□□ -0.45
SOX12-201ENST00000342665 Q5XG85 94 aa12.23□□□□□ -0.45
SOX12-201ENST00000342665 FP248Q71RG6 208 aaPredicted RBP12.22□□□□□ -0.45
SOX12-201ENST00000342665 HIVEP1P15822 2718 aa12.22□□□□□ -0.45
SOX12-201ENST00000342665 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.45
SOX12-201ENST00000342665 APCP25054 2843 aa12.2□□□□□ -0.46
SOX12-201ENST00000342665 KTN1-AS1Q86SY8 53 aa12.2□□□□□ -0.46
SOX12-201ENST00000342665 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
SOX12-201ENST00000342665 J3QL48 77 aa12.18□□□□□ -0.46
SOX12-201ENST00000342665 Q8N9P0 234 aaPredicted RBP12.18□□□□□ -0.46
SOX12-201ENST00000342665 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
SOX12-201ENST00000342665 Q75L30 129 aa12.11□□□□□ -0.47
SOX12-201ENST00000342665 LINC01558Q9Y6Z2 57 aa12.1□□□□□ -0.47
SOX12-201ENST00000342665 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
SOX12-201ENST00000342665 OXTP01178 125 aa12.06□□□□□ -0.48
SOX12-201ENST00000342665 PANO1I0J062 215 aa12.06□□□□□ -0.48
SOX12-201ENST00000342665 LCA10Q71F78 164 aa12.06□□□□□ -0.48
SOX12-201ENST00000342665 LINC00483Q53H64 154 aa12.06□□□□□ -0.48
SOX12-201ENST00000342665 Q5W150 140 aa12.05□□□□□ -0.48
SOX12-201ENST00000342665 RBM12B-AS1Q9P1G2 102 aa12.05□□□□□ -0.48
SOX12-201ENST00000342665 ZCCHC13Q8WW36 166 aaKnown RBP12.05□□□□□ -0.48
SOX12-201ENST00000342665 COX6B2Q6YFQ2 88 aa12.03□□□□□ -0.48
SOX12-201ENST00000342665 FLG2Q5D862 2391 aaPredicted RBP12.03□□□□□ -0.48
SOX12-201ENST00000342665 HRNRQ86YZ3 2850 aaPredicted RBP12.02□□□□□ -0.49
SOX12-201ENST00000342665 DCHS2Q6V1P9 2916 aa12.02□□□□□ -0.49
SOX12-201ENST00000342665 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
SOX12-201ENST00000342665 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
SOX12-201ENST00000342665 SPINT4Q6UDR6 99 aa12□□□□□ -0.49
SOX12-201ENST00000342665 CRIPTQ9P021 101 aa12□□□□□ -0.49
SOX12-201ENST00000342665 NF1P21359 2839 aa11.99□□□□□ -0.49
SOX12-201ENST00000342665 Q6ZR54 194 aa11.97□□□□□ -0.49
SOX12-201ENST00000342665 Q5VV11 94 aa11.96□□□□□ -0.49
SOX12-201ENST00000342665 KRTAP10-1P60331 282 aa11.96□□□□□ -0.5
SOX12-201ENST00000342665 KRTAP10-2P60368 255 aa11.96□□□□□ -0.5
SOX12-201ENST00000342665 A0A1B0GU33 70 aa11.93□□□□□ -0.5
SOX12-201ENST00000342665 A0A0D9SG42 100 aa11.92□□□□□ -0.5
SOX12-201ENST00000342665 KRTAP7-1Q8IUC3 87 aa11.91□□□□□ -0.5
SOX12-201ENST00000342665 FBN2P35556 2912 aa11.91□□□□□ -0.5
SOX12-201ENST00000342665 WDFY3Q8IZQ1 3526 aa11.91□□□□□ -0.5
SOX12-201ENST00000342665 CRYBG3Q68DQ2 2970 aa11.89□□□□□ -0.51
SOX12-201ENST00000342665 TENM4Q6N022 2769 aa11.89□□□□□ -0.51
SOX12-201ENST00000342665 KRTAP11-1Q8IUC1 163 aa11.87□□□□□ -0.51
SOX12-201ENST00000342665 Q6ZSA8 131 aa11.86□□□□□ -0.51
SOX12-201ENST00000342665 Q6ZRN7 208 aaPredicted RBP11.84□□□□□ -0.51
SOX12-201ENST00000342665 SPINK7P58062 85 aa11.84□□□□□ -0.51
SOX12-201ENST00000342665 LINC01554Q52M75 96 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms