RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ATP5EP56381 51 aaPredicted RBP12.64□□□□□ -0.39
SPG7-202ENST00000341316 Q8NBF4 154 aa12.64□□□□□ -0.39
SPG7-202ENST00000341316 A0A1B0GW54 56 aa12.64□□□□□ -0.39
SPG7-202ENST00000341316 SMIM29Q86T20 159 aa12.64□□□□□ -0.39
SPG7-202ENST00000341316 NBDYA0A0U1RRE5 68 aa12.63□□□□□ -0.39
SPG7-202ENST00000341316 C14orf177Q52M58 125 aa12.63□□□□□ -0.39
SPG7-202ENST00000341316 SMIM26A0A096LP01 95 aa12.62□□□□□ -0.39
SPG7-202ENST00000341316 FP248Q71RG6 208 aaPredicted RBP12.62□□□□□ -0.39
SPG7-202ENST00000341316 PHF5AQ7RTV0 110 aaKnown RBP12.62□□□□□ -0.39
SPG7-202ENST00000341316 VPS13DQ5THJ4 4388 aa12.61□□□□□ -0.39
SPG7-202ENST00000341316 NUPR2A6NF83 97 aa12.6□□□□□ -0.39
SPG7-202ENST00000341316 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
SPG7-202ENST00000341316 HIGD2AQ9BW72 106 aa12.6□□□□□ -0.39
SPG7-202ENST00000341316 MEGF8Q7Z7M0 2845 aa12.6□□□□□ -0.39
SPG7-202ENST00000341316 FAM30AQ9NZY2 134 aa12.6□□□□□ -0.39
SPG7-202ENST00000341316 SPRR4Q96PI1 79 aa12.59□□□□□ -0.39
SPG7-202ENST00000341316 C9orf163Q8N9P6 203 aa12.59□□□□□ -0.39
SPG7-202ENST00000341316 A0A0G2JQZ4 141 aa12.58□□□□□ -0.4
SPG7-202ENST00000341316 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
SPG7-202ENST00000341316 LINC00474Q9P2X8 69 aa12.57□□□□□ -0.4
SPG7-202ENST00000341316 DSCR10P59022 87 aa12.56□□□□□ -0.4
SPG7-202ENST00000341316 PANO1I0J062 215 aa12.55□□□□□ -0.4
SPG7-202ENST00000341316 LINC00476Q8WZB0 136 aa12.55□□□□□ -0.4
SPG7-202ENST00000341316 KMT2AQ03164 3969 aa12.54□□□□□ -0.4
SPG7-202ENST00000341316 K7EQZ3 153 aa12.53□□□□□ -0.4
SPG7-202ENST00000341316 DNAH2Q9P225 4427 aa12.5□□□□□ -0.41
SPG7-202ENST00000341316 FAM229BQ4G0N7 80 aa12.5□□□□□ -0.41
SPG7-202ENST00000341316 IGFL1Q6UW32 110 aa12.5□□□□□ -0.41
SPG7-202ENST00000341316 LCE6AA0A183 80 aa12.49□□□□□ -0.41
SPG7-202ENST00000341316 LINC00336Q6ZUF6 198 aa12.48□□□□□ -0.41
SPG7-202ENST00000341316 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
SPG7-202ENST00000341316 H0Y9J4 135 aa12.44□□□□□ -0.42
SPG7-202ENST00000341316 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.44□□□□□ -0.42
SPG7-202ENST00000341316 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
SPG7-202ENST00000341316 UBE2AP49459 152 aa12.42□□□□□ -0.42
SPG7-202ENST00000341316 HCG22E2RYF7 251 aa12.42□□□□□ -0.42
SPG7-202ENST00000341316 DEFB116Q30KQ4 102 aa12.42□□□□□ -0.42
SPG7-202ENST00000341316 PKIGQ9Y2B9 76 aa12.4□□□□□ -0.42
SPG7-202ENST00000341316 A0A087WTM6 91 aa12.4□□□□□ -0.42
SPG7-202ENST00000341316 MPLKIPQ8TAP9 179 aa12.4□□□□□ -0.42
SPG7-202ENST00000341316 ZCCHC13Q8WW36 166 aaKnown RBP12.4□□□□□ -0.42
SPG7-202ENST00000341316 TGP01266 2768 aa12.4□□□□□ -0.43
SPG7-202ENST00000341316 SPACA4Q8TDM5 124 aa12.39□□□□□ -0.43
SPG7-202ENST00000341316 SPRR1BP22528 89 aa12.39□□□□□ -0.43
SPG7-202ENST00000341316 A0A087WSZ3 146 aa12.37□□□□□ -0.43
SPG7-202ENST00000341316 KRTAP13-1Q8IUC0 172 aa12.37□□□□□ -0.43
SPG7-202ENST00000341316 PRO0628Q9UI54 55 aa12.37□□□□□ -0.43
SPG7-202ENST00000341316 DNAH17Q9UFH2 4485 aa12.35□□□□□ -0.43
SPG7-202ENST00000341316 Q6ZR54 194 aa12.34□□□□□ -0.43
SPG7-202ENST00000341316 WFDC13Q8IUB5 93 aa12.34□□□□□ -0.43
SPG7-202ENST00000341316 hDV103S1A0JD37 113 aa12.32□□□□□ -0.44
SPG7-202ENST00000341316 FBN3Q75N90 2809 aa12.32□□□□□ -0.44
SPG7-202ENST00000341316 RPL37AP61513 92 aaKnown RBP12.31□□□□□ -0.44
SPG7-202ENST00000341316 RTL8CO15255 209 aa12.3□□□□□ -0.44
SPG7-202ENST00000341316 DNAH8Q96JB1 4490 aa12.29□□□□□ -0.44
SPG7-202ENST00000341316 C1orf64Q8NEQ6 169 aa12.28□□□□□ -0.44
SPG7-202ENST00000341316 FRAS1Q86XX4 4008 aa12.28□□□□□ -0.44
SPG7-202ENST00000341316 BRK1Q8WUW1 75 aa12.25□□□□□ -0.45
SPG7-202ENST00000341316 PRR4Q16378 134 aa12.25□□□□□ -0.45
SPG7-202ENST00000341316 KRTAP29-1A8MX34 341 aaPredicted RBP12.22□□□□□ -0.45
SPG7-202ENST00000341316 MP68P56378 58 aa12.21□□□□□ -0.46
SPG7-202ENST00000341316 PSORS1C2Q9UIG4 136 aa12.21□□□□□ -0.46
SPG7-202ENST00000341316 CYP4F30PQ9H0H9 118 aa12.2□□□□□ -0.46
SPG7-202ENST00000341316 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
SPG7-202ENST00000341316 PRR15Q8IV56 129 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 IGLV9-49A0A0B4J1Y8 123 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 C1orf134Q5TEV5 83 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 LINC00472Q9H8W2 130 aa12.18□□□□□ -0.46
SPG7-202ENST00000341316 IGLV5-52A0A0A0MRZ9 124 aa12.17□□□□□ -0.46
SPG7-202ENST00000341316 TRAV22A0A0B4J277 110 aa12.17□□□□□ -0.46
SPG7-202ENST00000341316 NDUFB1O75438 58 aa12.17□□□□□ -0.46
SPG7-202ENST00000341316 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.46
SPG7-202ENST00000341316 A8MWP4 228 aa12.15□□□□□ -0.46
SPG7-202ENST00000341316 LY6G6CO95867 125 aa12.15□□□□□ -0.46
SPG7-202ENST00000341316 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
SPG7-202ENST00000341316 H0Y9P7 68 aa12.13□□□□□ -0.47
SPG7-202ENST00000341316 Q1T7F1 81 aa12.13□□□□□ -0.47
SPG7-202ENST00000341316 DNAH11Q96DT5 4516 aa12.12□□□□□ -0.47
SPG7-202ENST00000341316 ANAPC11Q9NYG5 84 aa12.12□□□□□ -0.47
SPG7-202ENST00000341316 HYDINQ4G0P3 5121 aa12.12□□□□□ -0.47
SPG7-202ENST00000341316 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
SPG7-202ENST00000341316 ZNF861PO60384 105 aa12.08□□□□□ -0.48
SPG7-202ENST00000341316 H3BPC8 53 aa12.06□□□□□ -0.48
SPG7-202ENST00000341316 ZNF706Q9Y5V0 76 aaPredicted RBP12.06□□□□□ -0.48
SPG7-202ENST00000341316 Q96NJ1 140 aa12.05□□□□□ -0.48
SPG7-202ENST00000341316 MMP24-AS1A0A0U1RRL7 71 aa12.04□□□□□ -0.48
SPG7-202ENST00000341316 MOBPQ13875 183 aa12.04□□□□□ -0.48
SPG7-202ENST00000341316 PSPHP1O15172 72 aa12.04□□□□□ -0.48
SPG7-202ENST00000341316 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
SPG7-202ENST00000341316 ALMS1Q8TCU4 4167 aa12.03□□□□□ -0.48
SPG7-202ENST00000341316 SPANXA2-OT1Q8N9U9 137 aa12.02□□□□□ -0.49
SPG7-202ENST00000341316 FAT2Q9NYQ8 4349 aa11.99□□□□□ -0.49
SPG7-202ENST00000341316 IGLV7-43P04211 117 aa11.98□□□□□ -0.49
SPG7-202ENST00000341316 PKD1P98161 4303 aa11.97□□□□□ -0.49
SPG7-202ENST00000341316 CIRBP-AS1Q8TBR5 109 aa11.95□□□□□ -0.5
SPG7-202ENST00000341316 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
SPG7-202ENST00000341316 A8MUN3 132 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms