RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
H3F3C-201ENST00000340398 ANKRD39Q53RE8 183 aa8.6□□□□□ -1.03
H3F3C-201ENST00000340398 SMIM11BQ8TCY0 68 aa8.59□□□□□ -1.03
H3F3C-201ENST00000340398 TCL1BO95988 128 aa8.58□□□□□ -1.04
H3F3C-201ENST00000340398 IFITM1P13164 125 aa8.58□□□□□ -1.04
H3F3C-201ENST00000340398 KRTDAPP60985 99 aa8.58□□□□□ -1.04
H3F3C-201ENST00000340398 HIST3H2BBQ8N257 126 aa8.57□□□□□ -1.04
H3F3C-201ENST00000340398 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
H3F3C-201ENST00000340398 ATOH7Q8N100 152 aa8.56□□□□□ -1.04
H3F3C-201ENST00000340398 A4D1N5 150 aa8.55□□□□□ -1.04
H3F3C-201ENST00000340398 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
H3F3C-201ENST00000340398 Q6Q795 121 aa8.53□□□□□ -1.04
H3F3C-201ENST00000340398 Q6ZVH6 145 aa8.53□□□□□ -1.04
H3F3C-201ENST00000340398 NHP2Q9NX24 153 aaKnown RBP8.53□□□□□ -1.04
H3F3C-201ENST00000340398 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
H3F3C-201ENST00000340398 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
H3F3C-201ENST00000340398 F8WEM9 126 aa8.5□□□□□ -1.05
H3F3C-201ENST00000340398 LINC00575Q6W349 94 aa8.5□□□□□ -1.05
H3F3C-201ENST00000340398 OBSCN-AS1Q96MR7 158 aa8.5□□□□□ -1.05
H3F3C-201ENST00000340398 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
H3F3C-201ENST00000340398 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
H3F3C-201ENST00000340398 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
H3F3C-201ENST00000340398 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
H3F3C-201ENST00000340398 Q6ZQY7 126 aa8.48□□□□□ -1.05
H3F3C-201ENST00000340398 C20orf202A1L168 122 aa8.47□□□□□ -1.05
H3F3C-201ENST00000340398 VAMP3Q15836 100 aa8.47□□□□□ -1.05
H3F3C-201ENST00000340398 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
H3F3C-201ENST00000340398 hADV29S1A0JD25 119 aa8.46□□□□□ -1.06
H3F3C-201ENST00000340398 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
H3F3C-201ENST00000340398 Q6JHZ5 121 aa8.45□□□□□ -1.06
H3F3C-201ENST00000340398 Q75L30 129 aa8.45□□□□□ -1.06
H3F3C-201ENST00000340398 CLEC2BQ92478 149 aa8.44□□□□□ -1.06
H3F3C-201ENST00000340398 TSTD3H0UI37 97 aa8.43□□□□□ -1.06
H3F3C-201ENST00000340398 Q96NJ1 140 aa8.41□□□□□ -1.06
H3F3C-201ENST00000340398 H3BUT2 72 aa8.39□□□□□ -1.07
H3F3C-201ENST00000340398 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
H3F3C-201ENST00000340398 LST1O00453 97 aa8.38□□□□□ -1.07
H3F3C-201ENST00000340398 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.37□□□□□ -1.07
H3F3C-201ENST00000340398 SNHG12Q9BXW3 62 aa8.37□□□□□ -1.07
H3F3C-201ENST00000340398 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
H3F3C-201ENST00000340398 SCGB1D1O95968 90 aa8.35□□□□□ -1.07
H3F3C-201ENST00000340398 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
H3F3C-201ENST00000340398 C20orf166-AS1Q96NR2 134 aa8.32□□□□□ -1.08
H3F3C-201ENST00000340398 A8MUU9 505 aa8.31□□□□□ -1.08
H3F3C-201ENST00000340398 CFC1P0CG37 223 aa8.3□□□□□ -1.08
H3F3C-201ENST00000340398 PPDPFLQ8WWR9 84 aa8.3□□□□□ -1.08
H3F3C-201ENST00000340398 USH2AO75445 5202 aa8.3□□□□□ -1.08
H3F3C-201ENST00000340398 BVES-AS1Q5T3Y7 98 aa8.29□□□□□ -1.08
H3F3C-201ENST00000340398 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
H3F3C-201ENST00000340398 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
H3F3C-201ENST00000340398 TRBV20-1A0A075B6N2 111 aa8.27□□□□□ -1.09
H3F3C-201ENST00000340398 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
H3F3C-201ENST00000340398 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
H3F3C-201ENST00000340398 DSCR10P59022 87 aa8.26□□□□□ -1.09
H3F3C-201ENST00000340398 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
H3F3C-201ENST00000340398 HIST1H4GQ99525 98 aa8.26□□□□□ -1.09
H3F3C-201ENST00000340398 A0A087WSZ3 146 aa8.25□□□□□ -1.09
H3F3C-201ENST00000340398 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
H3F3C-201ENST00000340398 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
H3F3C-201ENST00000340398 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
H3F3C-201ENST00000340398 NDUFV3P56181 108 aaKnown RBP8.24□□□□□ -1.09
H3F3C-201ENST00000340398 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
H3F3C-201ENST00000340398 MT2AP02795 61 aa8.22□□□□□ -1.09
H3F3C-201ENST00000340398 M0R143 59 aa8.21□□□□□ -1.1
H3F3C-201ENST00000340398 UQCR10Q9UDW1 63 aa8.21□□□□□ -1.1
H3F3C-201ENST00000340398 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
H3F3C-201ENST00000340398 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
H3F3C-201ENST00000340398 H3BMG7 143 aa8.18□□□□□ -1.1
H3F3C-201ENST00000340398 COX8AP10176 69 aa8.18□□□□□ -1.1
H3F3C-201ENST00000340398 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
H3F3C-201ENST00000340398 MT1FP04733 61 aa8.17□□□□□ -1.1
H3F3C-201ENST00000340398 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
H3F3C-201ENST00000340398 A0A1W2PNM2 257 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 H0YGX0 51 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 SNCGO76070 127 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 LINC00313P59037 77 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 RAB37Q96AX2 223 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
H3F3C-201ENST00000340398 FCGBPQ9Y6R7 5405 aaPredicted RBP8.16□□□□□ -1.1
H3F3C-201ENST00000340398 FABP2P12104 132 aa8.15□□□□□ -1.1
H3F3C-201ENST00000340398 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
H3F3C-201ENST00000340398 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
H3F3C-201ENST00000340398 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
H3F3C-201ENST00000340398 DLEU1O43261 78 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 IGKV4-1P06312 121 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 HRES1P13985 223 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 COL5A1-AS1Q5SY13 56 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 MPLKIPQ8TAP9 179 aa8.12□□□□□ -1.11
H3F3C-201ENST00000340398 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
H3F3C-201ENST00000340398 A0A0B4J2C4 111 aa8.1□□□□□ -1.11
H3F3C-201ENST00000340398 A0A1B0GV72 72 aa8.08□□□□□ -1.12
H3F3C-201ENST00000340398 A0A1B0GV90 55 aa8.08□□□□□ -1.12
H3F3C-201ENST00000340398 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
H3F3C-201ENST00000340398 A0A1B0GX51 115 aa8.06□□□□□ -1.12
H3F3C-201ENST00000340398 ANKRD29Q8N6D5 301 aa8.06□□□□□ -1.12
H3F3C-201ENST00000340398 HIGD1BQ9P298 99 aa8.06□□□□□ -1.12
H3F3C-201ENST00000340398 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
H3F3C-201ENST00000340398 PRO1854Q9UHT4 67 aa8.05□□□□□ -1.12
H3F3C-201ENST00000340398 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms