RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 PRLHP81277 87 aa12.56□□□□□ -0.4
CDCA4-201ENST00000336219 IGFL1Q6UW32 110 aa12.56□□□□□ -0.4
CDCA4-201ENST00000336219 LYSTQ99698 3801 aa12.56□□□□□ -0.4
CDCA4-201ENST00000336219 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
CDCA4-201ENST00000336219 WFDC13Q8IUB5 93 aa12.55□□□□□ -0.4
CDCA4-201ENST00000336219 A0A096LNI7 61 aa12.53□□□□□ -0.4
CDCA4-201ENST00000336219 RPL37AP61513 92 aaKnown RBP12.53□□□□□ -0.4
CDCA4-201ENST00000336219 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
CDCA4-201ENST00000336219 A0A087WSZ3 146 aa12.51□□□□□ -0.41
CDCA4-201ENST00000336219 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
CDCA4-201ENST00000336219 SRRM2Q9UQ35 2752 aaKnown RBP12.51□□□□□ -0.41
CDCA4-201ENST00000336219 C16orf90A8MZG2 172 aa12.51□□□□□ -0.41
CDCA4-201ENST00000336219 CNBPP62633 177 aaKnown RBP12.49□□□□□ -0.41
CDCA4-201ENST00000336219 CSMD3Q7Z407 3707 aa12.49□□□□□ -0.41
CDCA4-201ENST00000336219 COL6A5A8TX70 2615 aa12.47□□□□□ -0.41
CDCA4-201ENST00000336219 DNAH9Q9NYC9 4486 aa12.45□□□□□ -0.42
CDCA4-201ENST00000336219 PSPHP1O15172 72 aa12.43□□□□□ -0.42
CDCA4-201ENST00000336219 IGLV8-61A0A075B6I0 122 aa12.42□□□□□ -0.42
CDCA4-201ENST00000336219 KRTAP11-1Q8IUC1 163 aa12.41□□□□□ -0.42
CDCA4-201ENST00000336219 LINC00208Q96KT6 92 aa12.4□□□□□ -0.42
CDCA4-201ENST00000336219 UBE2AP49459 152 aa12.39□□□□□ -0.43
CDCA4-201ENST00000336219 Q1T7F1 81 aa12.39□□□□□ -0.43
CDCA4-201ENST00000336219 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
CDCA4-201ENST00000336219 CYP4F30PQ9H0H9 118 aa12.38□□□□□ -0.43
CDCA4-201ENST00000336219 C1orf195Q5TG92 126 aa12.37□□□□□ -0.43
CDCA4-201ENST00000336219 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
CDCA4-201ENST00000336219 TRAV22A0A0B4J277 110 aa12.36□□□□□ -0.43
CDCA4-201ENST00000336219 STAB2Q8WWQ8 2551 aa12.36□□□□□ -0.43
CDCA4-201ENST00000336219 MP68P56378 58 aa12.36□□□□□ -0.43
CDCA4-201ENST00000336219 PHF5AQ7RTV0 110 aaKnown RBP12.36□□□□□ -0.43
CDCA4-201ENST00000336219 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
CDCA4-201ENST00000336219 KRTAP29-1A8MX34 341 aaPredicted RBP12.35□□□□□ -0.43
CDCA4-201ENST00000336219 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
CDCA4-201ENST00000336219 COL7A1Q02388 2944 aa12.35□□□□□ -0.43
CDCA4-201ENST00000336219 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
CDCA4-201ENST00000336219 CASC2Q6XLA1 102 aa12.32□□□□□ -0.44
CDCA4-201ENST00000336219 H0Y9J4 135 aa12.31□□□□□ -0.44
CDCA4-201ENST00000336219 H0Y9P7 68 aa12.31□□□□□ -0.44
CDCA4-201ENST00000336219 NDUFB1O75438 58 aa12.3□□□□□ -0.44
CDCA4-201ENST00000336219 SPRR1BP22528 89 aa12.3□□□□□ -0.44
CDCA4-201ENST00000336219 PRR15Q8IV56 129 aa12.29□□□□□ -0.44
CDCA4-201ENST00000336219 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
CDCA4-201ENST00000336219 A8MUN3 132 aa12.28□□□□□ -0.44
CDCA4-201ENST00000336219 C9orf163Q8N9P6 203 aa12.28□□□□□ -0.44
CDCA4-201ENST00000336219 LINC00472Q9H8W2 130 aa12.25□□□□□ -0.45
CDCA4-201ENST00000336219 A8MU10 97 aa12.25□□□□□ -0.45
CDCA4-201ENST00000336219 DNAH7Q8WXX0 4024 aa12.24□□□□□ -0.45
CDCA4-201ENST00000336219 A8MWP4 228 aa12.24□□□□□ -0.45
CDCA4-201ENST00000336219 DYNC2H1Q8NCM8 4307 aaKnown RBP12.22□□□□□ -0.45
CDCA4-201ENST00000336219 NBDYA0A0U1RRE5 68 aa12.19□□□□□ -0.46
CDCA4-201ENST00000336219 PANO1I0J062 215 aa12.19□□□□□ -0.46
CDCA4-201ENST00000336219 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
CDCA4-201ENST00000336219 Q5VV11 94 aa12.17□□□□□ -0.46
CDCA4-201ENST00000336219 V9GYY9 64 aa12.17□□□□□ -0.46
CDCA4-201ENST00000336219 Q6ZRN7 208 aaPredicted RBP12.16□□□□□ -0.46
CDCA4-201ENST00000336219 KRTAP13-1Q8IUC0 172 aa12.16□□□□□ -0.46
CDCA4-201ENST00000336219 MMP24-AS1A0A0U1RRL7 71 aa12.15□□□□□ -0.46
CDCA4-201ENST00000336219 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
CDCA4-201ENST00000336219 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
CDCA4-201ENST00000336219 MDFIQ99750 246 aa12.12□□□□□ -0.47
CDCA4-201ENST00000336219 H3BPC8 53 aa12.12□□□□□ -0.47
CDCA4-201ENST00000336219 PLECQ15149 4684 aaKnown RBP12.11□□□□□ -0.47
CDCA4-201ENST00000336219 IGLV9-49A0A0B4J1Y8 123 aa12.1□□□□□ -0.47
CDCA4-201ENST00000336219 PCOTHQ58A44 107 aa12.1□□□□□ -0.47
CDCA4-201ENST00000336219 NUPR2A6NF83 97 aa12.08□□□□□ -0.48
CDCA4-201ENST00000336219 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
CDCA4-201ENST00000336219 SPACA4Q8TDM5 124 aa12.08□□□□□ -0.48
CDCA4-201ENST00000336219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.08□□□□□ -0.48
CDCA4-201ENST00000336219 CHKB-CPT1BH3BT56 60 aa12.07□□□□□ -0.48
CDCA4-201ENST00000336219 Q96NJ1 140 aa12.06□□□□□ -0.48
CDCA4-201ENST00000336219 COA5Q86WW8 74 aa12.05□□□□□ -0.48
CDCA4-201ENST00000336219 PMAIP1Q13794 54 aa12.05□□□□□ -0.48
CDCA4-201ENST00000336219 FRAS1Q86XX4 4008 aa12.02□□□□□ -0.49
CDCA4-201ENST00000336219 CD164Q04900 197 aa12.01□□□□□ -0.49
CDCA4-201ENST00000336219 IGLV7-46A0A075B6I9 117 aa12.01□□□□□ -0.49
CDCA4-201ENST00000336219 LIMD2Q9BT23 127 aa12.01□□□□□ -0.49
CDCA4-201ENST00000336219 SEC61GP60059 68 aa11.99□□□□□ -0.49
CDCA4-201ENST00000336219 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
CDCA4-201ENST00000336219 MOBPQ13875 183 aa11.98□□□□□ -0.49
CDCA4-201ENST00000336219 A0A087WTM6 91 aa11.98□□□□□ -0.49
CDCA4-201ENST00000336219 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
CDCA4-201ENST00000336219 NDUFS5O43920 106 aa11.97□□□□□ -0.49
CDCA4-201ENST00000336219 C8orf17Q9NRJ1 99 aa11.97□□□□□ -0.49
CDCA4-201ENST00000336219 ANAPC11Q9NYG5 84 aa11.96□□□□□ -0.5
CDCA4-201ENST00000336219 ASB16-AS1Q495Z4 193 aa11.95□□□□□ -0.5
CDCA4-201ENST00000336219 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
CDCA4-201ENST00000336219 DNAH8Q96JB1 4490 aa11.94□□□□□ -0.5
CDCA4-201ENST00000336219 A0A087X002 238 aa11.92□□□□□ -0.5
CDCA4-201ENST00000336219 LCA10Q71F78 164 aa11.92□□□□□ -0.5
CDCA4-201ENST00000336219 NOTCH2NLQ7Z3S9 236 aa11.92□□□□□ -0.5
CDCA4-201ENST00000336219 STARD9Q9P2P6 4700 aa11.92□□□□□ -0.5
CDCA4-201ENST00000336219 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
CDCA4-201ENST00000336219 ZNF706Q9Y5V0 76 aaPredicted RBP11.92□□□□□ -0.5
CDCA4-201ENST00000336219 SPTSSBQ8NFR3 76 aa11.91□□□□□ -0.5
CDCA4-201ENST00000336219 WWC2-AS2Q96NR7 200 aa11.91□□□□□ -0.5
CDCA4-201ENST00000336219 RTL8CO15255 209 aa11.91□□□□□ -0.5
CDCA4-201ENST00000336219 IGLV5-52A0A0A0MRZ9 124 aa11.9□□□□□ -0.5
CDCA4-201ENST00000336219 SPAG11AQ6PDA7 123 aa11.9□□□□□ -0.5
CDCA4-201ENST00000336219 A6NED7 52 aa11.89□□□□□ -0.51
CDCA4-201ENST00000336219 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms