RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 SETXQ7Z333 2677 aaKnown RBP9.87□□□□□ -0.83
HDAC5-202ENST00000336057 LINC00304Q8N9R0 145 aa9.85□□□□□ -0.83
HDAC5-202ENST00000336057 NOTCH1P46531 2555 aa9.84□□□□□ -0.83
HDAC5-202ENST00000336057 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
HDAC5-202ENST00000336057 BOD1L1Q8NFC6 3051 aa9.83□□□□□ -0.84
HDAC5-202ENST00000336057 FRYLO94915 3013 aa9.83□□□□□ -0.84
HDAC5-202ENST00000336057 KRTAP26-1Q6PEX3 210 aa9.82□□□□□ -0.84
HDAC5-202ENST00000336057 COL6A5A8TX70 2615 aa9.81□□□□□ -0.84
HDAC5-202ENST00000336057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
HDAC5-202ENST00000336057 FLNCQ14315 2725 aa9.81□□□□□ -0.84
HDAC5-202ENST00000336057 ATMQ13315 3056 aa9.81□□□□□ -0.84
HDAC5-202ENST00000336057 Q1T7F1 81 aa9.8□□□□□ -0.84
HDAC5-202ENST00000336057 UBR5O95071 2799 aaPredicted RBP9.79□□□□□ -0.84
HDAC5-202ENST00000336057 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
HDAC5-202ENST00000336057 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
HDAC5-202ENST00000336057 Q5XG85 94 aa9.75□□□□□ -0.85
HDAC5-202ENST00000336057 CD164Q04900 197 aa9.74□□□□□ -0.85
HDAC5-202ENST00000336057 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
HDAC5-202ENST00000336057 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
HDAC5-202ENST00000336057 LRBAP50851 2863 aa9.73□□□□□ -0.85
HDAC5-202ENST00000336057 NBEAL1Q6ZS30 2694 aa9.73□□□□□ -0.85
HDAC5-202ENST00000336057 MMP24-AS1A0A0U1RRL7 71 aa9.73□□□□□ -0.85
HDAC5-202ENST00000336057 SMR3BP02814 79 aaPredicted RBP9.72□□□□□ -0.85
HDAC5-202ENST00000336057 SPRR1BP22528 89 aa9.72□□□□□ -0.85
HDAC5-202ENST00000336057 TNP2Q05952 138 aa9.72□□□□□ -0.85
HDAC5-202ENST00000336057 PRR26Q8N8Z3 221 aa9.71□□□□□ -0.85
HDAC5-202ENST00000336057 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
HDAC5-202ENST00000336057 CDC42SE1Q9NRR8 79 aa9.7□□□□□ -0.86
HDAC5-202ENST00000336057 ITPR1Q14643 2758 aa9.7□□□□□ -0.86
HDAC5-202ENST00000336057 COL6A3P12111 3177 aa9.7□□□□□ -0.86
HDAC5-202ENST00000336057 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
HDAC5-202ENST00000336057 KTN1-AS1Q86SY8 53 aa9.69□□□□□ -0.86
HDAC5-202ENST00000336057 COL12A1Q99715 3063 aa9.68□□□□□ -0.86
HDAC5-202ENST00000336057 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
HDAC5-202ENST00000336057 LINC00472Q9H8W2 130 aa9.68□□□□□ -0.86
HDAC5-202ENST00000336057 DMXL2Q8TDJ6 3036 aa9.68□□□□□ -0.86
HDAC5-202ENST00000336057 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
HDAC5-202ENST00000336057 SPEGQ15772 3267 aa9.64□□□□□ -0.87
HDAC5-202ENST00000336057 Q8N1X5 172 aa9.64□□□□□ -0.87
HDAC5-202ENST00000336057 TACC2O95359 2948 aa9.64□□□□□ -0.87
HDAC5-202ENST00000336057 OXTP01178 125 aa9.62□□□□□ -0.87
HDAC5-202ENST00000336057 Q8N9P0 234 aaPredicted RBP9.61□□□□□ -0.87
HDAC5-202ENST00000336057 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
HDAC5-202ENST00000336057 HRES1P13985 223 aa9.61□□□□□ -0.87
HDAC5-202ENST00000336057 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
HDAC5-202ENST00000336057 Q75L30 129 aa9.59□□□□□ -0.87
HDAC5-202ENST00000336057 REV3LO60673 3130 aa9.56□□□□□ -0.88
HDAC5-202ENST00000336057 LCA10Q71F78 164 aa9.56□□□□□ -0.88
HDAC5-202ENST00000336057 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
HDAC5-202ENST00000336057 UTP20O75691 2785 aaKnown RBP9.54□□□□□ -0.88
HDAC5-202ENST00000336057 ITPR2Q14571 2701 aa9.54□□□□□ -0.88
HDAC5-202ENST00000336057 ZZEF1O43149 2961 aa9.51□□□□□ -0.89
HDAC5-202ENST00000336057 NSD1Q96L73 2696 aaPredicted RBP9.5□□□□□ -0.89
HDAC5-202ENST00000336057 SPINT4Q6UDR6 99 aa9.49□□□□□ -0.89
HDAC5-202ENST00000336057 Q5VV11 94 aa9.48□□□□□ -0.89
HDAC5-202ENST00000336057 ASH1LQ9NR48 2969 aaKnown RBP9.48□□□□□ -0.89
HDAC5-202ENST00000336057 CFAP47Q6ZTR5 3102 aa9.48□□□□□ -0.89
HDAC5-202ENST00000336057 EYSQ5T1H1 3165 aa9.47□□□□□ -0.89
HDAC5-202ENST00000336057 Q5W150 140 aa9.46□□□□□ -0.9
HDAC5-202ENST00000336057 TNRC18O15417 2968 aaPredicted RBP9.44□□□□□ -0.9
HDAC5-202ENST00000336057 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
HDAC5-202ENST00000336057 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
HDAC5-202ENST00000336057 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
HDAC5-202ENST00000336057 ZANQ9Y493 2812 aa9.43□□□□□ -0.9
HDAC5-202ENST00000336057 CRIPTQ9P021 101 aa9.43□□□□□ -0.9
HDAC5-202ENST00000336057 PANO1I0J062 215 aa9.42□□□□□ -0.9
HDAC5-202ENST00000336057 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
HDAC5-202ENST00000336057 STAB2Q8WWQ8 2551 aa9.42□□□□□ -0.9
HDAC5-202ENST00000336057 J3QL48 77 aa9.4□□□□□ -0.9
HDAC5-202ENST00000336057 DMXL1Q9Y485 3027 aa9.4□□□□□ -0.9
HDAC5-202ENST00000336057 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
HDAC5-202ENST00000336057 USP34Q70CQ2 3546 aa9.38□□□□□ -0.91
HDAC5-202ENST00000336057 A0A0D9SG42 100 aa9.38□□□□□ -0.91
HDAC5-202ENST00000336057 HRNRQ86YZ3 2850 aaPredicted RBP9.37□□□□□ -0.91
HDAC5-202ENST00000336057 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
HDAC5-202ENST00000336057 A0A1B0GU33 70 aa9.37□□□□□ -0.91
HDAC5-202ENST00000336057 APCP25054 2843 aa9.36□□□□□ -0.91
HDAC5-202ENST00000336057 Q6ZR54 194 aa9.35□□□□□ -0.91
HDAC5-202ENST00000336057 SPINK7P58062 85 aa9.35□□□□□ -0.91
HDAC5-202ENST00000336057 KRTAP7-1Q8IUC3 87 aa9.34□□□□□ -0.91
HDAC5-202ENST00000336057 NIPBLQ6KC79 2804 aaeCLIP9.34□□□□□ -0.91
HDAC5-202ENST00000336057 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
HDAC5-202ENST00000336057 CELSR2Q9HCU4 2923 aa9.32□□□□□ -0.92
HDAC5-202ENST00000336057 HIVEP1P15822 2718 aa9.31□□□□□ -0.92
HDAC5-202ENST00000336057 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
HDAC5-202ENST00000336057 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
HDAC5-202ENST00000336057 KRTAP10-1P60331 282 aa9.29□□□□□ -0.92
HDAC5-202ENST00000336057 MYO15AQ9UKN7 3530 aa9.29□□□□□ -0.92
HDAC5-202ENST00000336057 DMAC1Q96GE9 116 aa9.28□□□□□ -0.92
HDAC5-202ENST00000336057 KMT2BQ9UMN6 2715 aaPredicted RBP9.27□□□□□ -0.92
HDAC5-202ENST00000336057 LCE6AA0A183 80 aa9.25□□□□□ -0.93
HDAC5-202ENST00000336057 LINC01554Q52M75 96 aa9.24□□□□□ -0.93
HDAC5-202ENST00000336057 Q6ZSA8 131 aa9.22□□□□□ -0.93
HDAC5-202ENST00000336057 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
HDAC5-202ENST00000336057 A0A087X002 238 aa9.21□□□□□ -0.93
HDAC5-202ENST00000336057 NOTCH2NLQ7Z3S9 236 aa9.21□□□□□ -0.93
HDAC5-202ENST00000336057 PRAC1Q96KF2 57 aa9.21□□□□□ -0.93
HDAC5-202ENST00000336057 DCHS2Q6V1P9 2916 aa9.19□□□□□ -0.94
HDAC5-202ENST00000336057 NF1P21359 2839 aa9.18□□□□□ -0.94
HDAC5-202ENST00000336057 FBN2P35556 2912 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms