RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
LRCH3-201ENST00000334859 UBE2AP49459 152 aa11.07□□□□□ -0.64
LRCH3-201ENST00000334859 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
LRCH3-201ENST00000334859 DSCR10P59022 87 aa11.06□□□□□ -0.64
LRCH3-201ENST00000334859 K7EQZ3 153 aa11.06□□□□□ -0.64
LRCH3-201ENST00000334859 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
LRCH3-201ENST00000334859 NDUFC1O43677 76 aa11.05□□□□□ -0.64
LRCH3-201ENST00000334859 SVIPQ8NHG7 77 aa11.04□□□□□ -0.64
LRCH3-201ENST00000334859 PKIGQ9Y2B9 76 aa11.04□□□□□ -0.64
LRCH3-201ENST00000334859 A0A087WSZ3 146 aa11.03□□□□□ -0.64
LRCH3-201ENST00000334859 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
LRCH3-201ENST00000334859 IGLV8-61A0A075B6I0 122 aa11.02□□□□□ -0.64
LRCH3-201ENST00000334859 DEFB116Q30KQ4 102 aa11.01□□□□□ -0.65
LRCH3-201ENST00000334859 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
LRCH3-201ENST00000334859 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
LRCH3-201ENST00000334859 H0Y9J4 135 aa11.01□□□□□ -0.65
LRCH3-201ENST00000334859 PANO1I0J062 215 aa11.01□□□□□ -0.65
LRCH3-201ENST00000334859 SERP1Q9Y6X1 66 aa10.98□□□□□ -0.65
LRCH3-201ENST00000334859 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
LRCH3-201ENST00000334859 HCG22E2RYF7 251 aa10.95□□□□□ -0.66
LRCH3-201ENST00000334859 SPRR1BP22528 89 aa10.95□□□□□ -0.66
LRCH3-201ENST00000334859 ATP5EP56381 51 aaPredicted RBP10.93□□□□□ -0.66
LRCH3-201ENST00000334859 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
LRCH3-201ENST00000334859 STARD9Q9P2P6 4700 aa10.92□□□□□ -0.66
LRCH3-201ENST00000334859 PRKDCP78527 4128 aaKnown RBP10.91□□□□□ -0.66
LRCH3-201ENST00000334859 SPACA4Q8TDM5 124 aa10.91□□□□□ -0.66
LRCH3-201ENST00000334859 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
LRCH3-201ENST00000334859 WFDC13Q8IUB5 93 aa10.89□□□□□ -0.67
LRCH3-201ENST00000334859 Q5XG85 94 aa10.89□□□□□ -0.67
LRCH3-201ENST00000334859 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
LRCH3-201ENST00000334859 MEGF8Q7Z7M0 2845 aa10.89□□□□□ -0.67
LRCH3-201ENST00000334859 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
LRCH3-201ENST00000334859 A0A087WTM6 91 aa10.88□□□□□ -0.67
LRCH3-201ENST00000334859 LCE6AA0A183 80 aa10.88□□□□□ -0.67
LRCH3-201ENST00000334859 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
LRCH3-201ENST00000334859 RTL8CO15255 209 aa10.83□□□□□ -0.68
LRCH3-201ENST00000334859 IGLV9-49A0A0B4J1Y8 123 aa10.83□□□□□ -0.68
LRCH3-201ENST00000334859 C5orf47Q569G3 176 aa10.82□□□□□ -0.68
LRCH3-201ENST00000334859 LINC00472Q9H8W2 130 aa10.81□□□□□ -0.68
LRCH3-201ENST00000334859 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
LRCH3-201ENST00000334859 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
LRCH3-201ENST00000334859 A8MWP4 228 aa10.79□□□□□ -0.68
LRCH3-201ENST00000334859 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
LRCH3-201ENST00000334859 SMIM26A0A096LP01 95 aa10.79□□□□□ -0.68
LRCH3-201ENST00000334859 CASC2Q6XLA1 102 aa10.78□□□□□ -0.68
LRCH3-201ENST00000334859 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
LRCH3-201ENST00000334859 TGP01266 2768 aa10.77□□□□□ -0.69
LRCH3-201ENST00000334859 KRTAP29-1A8MX34 341 aaPredicted RBP10.77□□□□□ -0.69
LRCH3-201ENST00000334859 Q6ZR54 194 aa10.77□□□□□ -0.69
LRCH3-201ENST00000334859 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
LRCH3-201ENST00000334859 KMT2AQ03164 3969 aa10.76□□□□□ -0.69
LRCH3-201ENST00000334859 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
LRCH3-201ENST00000334859 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
LRCH3-201ENST00000334859 IGLV5-52A0A0A0MRZ9 124 aa10.74□□□□□ -0.69
LRCH3-201ENST00000334859 MP68P56378 58 aa10.74□□□□□ -0.69
LRCH3-201ENST00000334859 ZNF706Q9Y5V0 76 aaPredicted RBP10.73□□□□□ -0.69
LRCH3-201ENST00000334859 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
LRCH3-201ENST00000334859 LINC00483Q53H64 154 aa10.73□□□□□ -0.69
LRCH3-201ENST00000334859 FAM229BQ4G0N7 80 aa10.72□□□□□ -0.69
LRCH3-201ENST00000334859 PLAC8Q9NZF1 115 aa10.72□□□□□ -0.69
LRCH3-201ENST00000334859 C1orf134Q5TEV5 83 aa10.7□□□□□ -0.7
LRCH3-201ENST00000334859 NDUFB1O75438 58 aa10.69□□□□□ -0.7
LRCH3-201ENST00000334859 LINC00208Q96KT6 92 aa10.69□□□□□ -0.7
LRCH3-201ENST00000334859 MOBPQ13875 183 aa10.69□□□□□ -0.7
LRCH3-201ENST00000334859 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
LRCH3-201ENST00000334859 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
LRCH3-201ENST00000334859 WWC2-AS2Q96NR7 200 aa10.68□□□□□ -0.7
LRCH3-201ENST00000334859 H0Y9P7 68 aa10.67□□□□□ -0.7
LRCH3-201ENST00000334859 ZNF861PO60384 105 aa10.67□□□□□ -0.7
LRCH3-201ENST00000334859 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
LRCH3-201ENST00000334859 PRR4Q16378 134 aa10.67□□□□□ -0.7
LRCH3-201ENST00000334859 Q96NJ1 140 aa10.66□□□□□ -0.7
LRCH3-201ENST00000334859 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
LRCH3-201ENST00000334859 LY6G6CO95867 125 aa10.65□□□□□ -0.7
LRCH3-201ENST00000334859 DNHD1Q96M86 4753 aa10.64□□□□□ -0.71
LRCH3-201ENST00000334859 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
LRCH3-201ENST00000334859 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
LRCH3-201ENST00000334859 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
LRCH3-201ENST00000334859 hDV103S1A0JD37 113 aa10.63□□□□□ -0.71
LRCH3-201ENST00000334859 C1orf64Q8NEQ6 169 aa10.63□□□□□ -0.71
LRCH3-201ENST00000334859 H3BPC8 53 aa10.58□□□□□ -0.72
LRCH3-201ENST00000334859 IGHV6-1A0A0B4J1U7 121 aa10.57□□□□□ -0.72
LRCH3-201ENST00000334859 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
LRCH3-201ENST00000334859 CDK2AP2O75956 126 aa10.56□□□□□ -0.72
LRCH3-201ENST00000334859 IGLV7-43P04211 117 aa10.56□□□□□ -0.72
LRCH3-201ENST00000334859 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
LRCH3-201ENST00000334859 A0A1B0GVX0 72 aa10.54□□□□□ -0.72
LRCH3-201ENST00000334859 LINC00336Q6ZUF6 198 aa10.53□□□□□ -0.72
LRCH3-201ENST00000334859 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
LRCH3-201ENST00000334859 ASB16-AS1Q495Z4 193 aa10.51□□□□□ -0.73
LRCH3-201ENST00000334859 NDUFS5O43920 106 aa10.51□□□□□ -0.73
LRCH3-201ENST00000334859 KRTAP10-2P60368 255 aa10.5□□□□□ -0.73
LRCH3-201ENST00000334859 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
LRCH3-201ENST00000334859 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
LRCH3-201ENST00000334859 SPANXA2-OT1Q8N9U9 137 aa10.49□□□□□ -0.73
LRCH3-201ENST00000334859 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
LRCH3-201ENST00000334859 A0A087X002 238 aa10.44□□□□□ -0.74
LRCH3-201ENST00000334859 NOTCH2NLQ7Z3S9 236 aa10.44□□□□□ -0.74
LRCH3-201ENST00000334859 MRPL34Q9BQ48 92 aaKnown RBP10.44□□□□□ -0.74
LRCH3-201ENST00000334859 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms