RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 TYMSOSQ8TAI1 123 aa9.9□□□□□ -0.82
SLIT3-201ENST00000332966 HRES1P13985 223 aa9.89□□□□□ -0.83
SLIT3-201ENST00000332966 SPRR1BP22528 89 aa9.89□□□□□ -0.83
SLIT3-201ENST00000332966 PSORS1C2Q9UIG4 136 aa9.88□□□□□ -0.83
SLIT3-201ENST00000332966 KALRNO60229 2985 aa9.88□□□□□ -0.83
SLIT3-201ENST00000332966 K7EIL1 84 aa9.87□□□□□ -0.83
SLIT3-201ENST00000332966 MAP1AP78559 2803 aaPredicted RBP9.87□□□□□ -0.83
SLIT3-201ENST00000332966 LINC01554Q52M75 96 aa9.86□□□□□ -0.83
SLIT3-201ENST00000332966 SPINT4Q6UDR6 99 aa9.85□□□□□ -0.83
SLIT3-201ENST00000332966 SPINK7P58062 85 aa9.84□□□□□ -0.83
SLIT3-201ENST00000332966 A0A087WTM6 91 aa9.84□□□□□ -0.83
SLIT3-201ENST00000332966 KRTAP4-16G5E9R7 235 aaPredicted RBP9.83□□□□□ -0.84
SLIT3-201ENST00000332966 LCE6AA0A183 80 aa9.83□□□□□ -0.84
SLIT3-201ENST00000332966 UNC79Q9P2D8 2635 aa9.82□□□□□ -0.84
SLIT3-201ENST00000332966 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
SLIT3-201ENST00000332966 HECTD1Q9ULT8 2610 aa9.81□□□□□ -0.84
SLIT3-201ENST00000332966 KRTAP29-1A8MX34 341 aaPredicted RBP9.81□□□□□ -0.84
SLIT3-201ENST00000332966 FRYLO94915 3013 aa9.81□□□□□ -0.84
SLIT3-201ENST00000332966 PRAC1Q96KF2 57 aa9.8□□□□□ -0.84
SLIT3-201ENST00000332966 SZT2Q5T011 3432 aa9.78□□□□□ -0.84
SLIT3-201ENST00000332966 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
SLIT3-201ENST00000332966 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.84
SLIT3-201ENST00000332966 MGAM2Q2M2H8 2515 aa9.77□□□□□ -0.84
SLIT3-201ENST00000332966 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
SLIT3-201ENST00000332966 ADGRG4Q8IZF6 3080 aa9.74□□□□□ -0.85
SLIT3-201ENST00000332966 CFAP46Q8IYW2 2715 aa9.72□□□□□ -0.85
SLIT3-201ENST00000332966 Q8N1X5 172 aa9.71□□□□□ -0.85
SLIT3-201ENST00000332966 Q6ZR54 194 aa9.7□□□□□ -0.86
SLIT3-201ENST00000332966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.68□□□□□ -0.86
SLIT3-201ENST00000332966 CRIPTQ9P021 101 aa9.66□□□□□ -0.86
SLIT3-201ENST00000332966 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.86
SLIT3-201ENST00000332966 H3BS24 57 aa9.65□□□□□ -0.87
SLIT3-201ENST00000332966 Q5W150 140 aa9.65□□□□□ -0.87
SLIT3-201ENST00000332966 TACC2O95359 2948 aa9.64□□□□□ -0.87
SLIT3-201ENST00000332966 TEX15Q9BXT5 2789 aa9.63□□□□□ -0.87
SLIT3-201ENST00000332966 ASB16-AS1Q495Z4 193 aa9.63□□□□□ -0.87
SLIT3-201ENST00000332966 A6NN06 94 aa9.63□□□□□ -0.87
SLIT3-201ENST00000332966 BOD1L1Q8NFC6 3051 aa9.63□□□□□ -0.87
SLIT3-201ENST00000332966 FLNBO75369 2602 aaKnown RBP9.63□□□□□ -0.87
SLIT3-201ENST00000332966 LRBAP50851 2863 aa9.62□□□□□ -0.87
SLIT3-201ENST00000332966 CSAG1Q6PB30 78 aa9.62□□□□□ -0.87
SLIT3-201ENST00000332966 MAST4O15021 2626 aa9.62□□□□□ -0.87
SLIT3-201ENST00000332966 A0A1B0GU33 70 aa9.61□□□□□ -0.87
SLIT3-201ENST00000332966 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
SLIT3-201ENST00000332966 ITPR1Q14643 2758 aa9.59□□□□□ -0.87
SLIT3-201ENST00000332966 SPEGQ15772 3267 aa9.58□□□□□ -0.88
SLIT3-201ENST00000332966 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
SLIT3-201ENST00000332966 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
SLIT3-201ENST00000332966 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
SLIT3-201ENST00000332966 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
SLIT3-201ENST00000332966 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
SLIT3-201ENST00000332966 COL6A3P12111 3177 aa9.55□□□□□ -0.88
SLIT3-201ENST00000332966 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
SLIT3-201ENST00000332966 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SLIT3-201ENST00000332966 LINC00483Q53H64 154 aa9.53□□□□□ -0.88
SLIT3-201ENST00000332966 ATMQ13315 3056 aa9.52□□□□□ -0.88
SLIT3-201ENST00000332966 A8MU10 97 aa9.52□□□□□ -0.89
SLIT3-201ENST00000332966 KRTAP7-1Q8IUC3 87 aa9.48□□□□□ -0.89
SLIT3-201ENST00000332966 NBEAL1Q6ZS30 2694 aa9.48□□□□□ -0.89
SLIT3-201ENST00000332966 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
SLIT3-201ENST00000332966 NOTCH1P46531 2555 aa9.47□□□□□ -0.89
SLIT3-201ENST00000332966 A0A0D9SG42 100 aa9.47□□□□□ -0.89
SLIT3-201ENST00000332966 EYSQ5T1H1 3165 aa9.43□□□□□ -0.9
SLIT3-201ENST00000332966 IGSF10Q6WRI0 2623 aa9.43□□□□□ -0.9
SLIT3-201ENST00000332966 REV3LO60673 3130 aa9.41□□□□□ -0.9
SLIT3-201ENST00000332966 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
SLIT3-201ENST00000332966 TNRC18O15417 2968 aaPredicted RBP9.4□□□□□ -0.9
SLIT3-201ENST00000332966 FLNCQ14315 2725 aa9.4□□□□□ -0.91
SLIT3-201ENST00000332966 A0A087X002 238 aa9.38□□□□□ -0.91
SLIT3-201ENST00000332966 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
SLIT3-201ENST00000332966 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
SLIT3-201ENST00000332966 TEP1Q99973 2627 aaKnown RBP9.38□□□□□ -0.91
SLIT3-201ENST00000332966 CFAP47Q6ZTR5 3102 aa9.37□□□□□ -0.91
SLIT3-201ENST00000332966 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
SLIT3-201ENST00000332966 DMXL2Q8TDJ6 3036 aa9.36□□□□□ -0.91
SLIT3-201ENST00000332966 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
SLIT3-201ENST00000332966 SPTBN5Q9NRC6 3674 aaKnown RBP9.35□□□□□ -0.91
SLIT3-201ENST00000332966 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
SLIT3-201ENST00000332966 PANO1I0J062 215 aa9.35□□□□□ -0.91
SLIT3-201ENST00000332966 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
SLIT3-201ENST00000332966 USP34Q70CQ2 3546 aa9.29□□□□□ -0.92
SLIT3-201ENST00000332966 HRNRQ86YZ3 2850 aaPredicted RBP9.29□□□□□ -0.92
SLIT3-201ENST00000332966 SMR3BP02814 79 aaPredicted RBP9.28□□□□□ -0.92
SLIT3-201ENST00000332966 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.92
SLIT3-201ENST00000332966 STAB1Q9NY15 2570 aa9.27□□□□□ -0.93
SLIT3-201ENST00000332966 H1FX-AS1Q4G0G2 97 aa9.26□□□□□ -0.93
SLIT3-201ENST00000332966 UTP20O75691 2785 aaKnown RBP9.26□□□□□ -0.93
SLIT3-201ENST00000332966 APCP25054 2843 aa9.25□□□□□ -0.93
SLIT3-201ENST00000332966 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
SLIT3-201ENST00000332966 LOC400499M0QZD8 3231 aa9.24□□□□□ -0.93
SLIT3-201ENST00000332966 ROMO1P60602 79 aa9.23□□□□□ -0.93
SLIT3-201ENST00000332966 ZANQ9Y493 2812 aa9.22□□□□□ -0.93
SLIT3-201ENST00000332966 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
SLIT3-201ENST00000332966 MYO15AQ9UKN7 3530 aa9.18□□□□□ -0.94
SLIT3-201ENST00000332966 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
SLIT3-201ENST00000332966 DMXL1Q9Y485 3027 aa9.14□□□□□ -0.95
SLIT3-201ENST00000332966 LUZP6Q538Z0 58 aa9.14□□□□□ -0.95
SLIT3-201ENST00000332966 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
SLIT3-201ENST00000332966 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
SLIT3-201ENST00000332966 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms