RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PLA2G2DQ9UNK4 145 aa15.58■□□□□ 0.08
SOX1-201ENST00000330949 IGLV1-50A0A075B6I6 118 aa15.58■□□□□ 0.08
SOX1-201ENST00000330949 FBN1P35555 2871 aaKnown RBP15.57■□□□□ 0.08
SOX1-201ENST00000330949 F8P00451 2351 aa15.57■□□□□ 0.08
SOX1-201ENST00000330949 DEFB116Q30KQ4 102 aa15.57■□□□□ 0.08
SOX1-201ENST00000330949 RBM12B-AS1Q9P1G2 102 aa15.56■□□□□ 0.08
SOX1-201ENST00000330949 IGKV2D-24A0A075B6R9 120 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 Q75L30 129 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 H0Y9P7 68 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 LINC00476Q8WZB0 136 aa15.55■□□□□ 0.08
SOX1-201ENST00000330949 NDUFS5O43920 106 aa15.54■□□□□ 0.08
SOX1-201ENST00000330949 OXLD1Q5BKU9 147 aa15.53■□□□□ 0.08
SOX1-201ENST00000330949 IGLV5-37A0A075B6J1 123 aa15.51■□□□□ 0.07
SOX1-201ENST00000330949 KRTAP29-1A8MX34 341 aaPredicted RBP15.5■□□□□ 0.07
SOX1-201ENST00000330949 TLX1NBP0CAT3 122 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 LCA10Q71F78 164 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 A6NED7 52 aa15.5■□□□□ 0.07
SOX1-201ENST00000330949 LOC101927531A0A1B0GV80 90 aa15.49■□□□□ 0.07
SOX1-201ENST00000330949 IGFL1Q6UW32 110 aa15.47■□□□□ 0.07
SOX1-201ENST00000330949 PHF5AQ7RTV0 110 aaKnown RBP15.47■□□□□ 0.07
SOX1-201ENST00000330949 H3BNG1 76 aa15.45■□□□□ 0.06
SOX1-201ENST00000330949 C9orf163Q8N9P6 203 aa15.45■□□□□ 0.06
SOX1-201ENST00000330949 FAM168BA1KXE4 195 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 CASC2Q6XLA1 102 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 A6NN06 94 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 A0A087WSZ3 146 aa15.44■□□□□ 0.06
SOX1-201ENST00000330949 CDC42SE1Q9NRR8 79 aa15.42■□□□□ 0.06
SOX1-201ENST00000330949 A0A0G2JQZ4 141 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 A0A1W2PNN7 141 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 COA5Q86WW8 74 aa15.41■□□□□ 0.06
SOX1-201ENST00000330949 RPL37AP61513 92 aaKnown RBP15.39■□□□□ 0.06
SOX1-201ENST00000330949 LINC01556Q5JQF7 62 aa15.37■□□□□ 0.05
SOX1-201ENST00000330949 IGLV8-61A0A075B6I0 122 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 IGLV7-46A0A075B6I9 117 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 REG3GQ6UW15 175 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 KRTAP7-1Q8IUC3 87 aa15.35■□□□□ 0.05
SOX1-201ENST00000330949 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
SOX1-201ENST00000330949 KRTAP10-11P60412 298 aa15.34■□□□□ 0.05
SOX1-201ENST00000330949 CNBPP62633 177 aaKnown RBP15.33■□□□□ 0.04
SOX1-201ENST00000330949 COL6A5A8TX70 2615 aa15.32■□□□□ 0.04
SOX1-201ENST00000330949 C7orf65Q6ZTY9 151 aa15.31■□□□□ 0.04
SOX1-201ENST00000330949 A8MWP4 228 aa15.3■□□□□ 0.04
SOX1-201ENST00000330949 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.03
SOX1-201ENST00000330949 LINC01558Q9Y6Z2 57 aa15.26■□□□□ 0.03
SOX1-201ENST00000330949 MOBPQ13875 183 aa15.22■□□□□ 0.03
SOX1-201ENST00000330949 DEFB131BA0A096LNP1 70 aa15.21■□□□□ 0.03
SOX1-201ENST00000330949 PLAC8Q9NZF1 115 aa15.21■□□□□ 0.02
SOX1-201ENST00000330949 LINC00472Q9H8W2 130 aa15.19■□□□□ 0.02
SOX1-201ENST00000330949 SPAG11AQ6PDA7 123 aa15.19■□□□□ 0.02
SOX1-201ENST00000330949 DNAH10OSP0CZ25 163 aa15.16■□□□□ 0.02
SOX1-201ENST00000330949 PRLHP81277 87 aa15.16■□□□□ 0.02
SOX1-201ENST00000330949 C11orf45Q8TAV5 145 aa15.15■□□□□ 0.02
SOX1-201ENST00000330949 CSMD3Q7Z407 3707 aa15.15■□□□□ 0.02
SOX1-201ENST00000330949 PCOTHQ58A44 107 aa15.14■□□□□ 0.01
SOX1-201ENST00000330949 CASC10Q5T4H9 136 aa15.13■□□□□ 0.01
SOX1-201ENST00000330949 MMP24-AS1A0A0U1RRL7 71 aa15.13■□□□□ 0.01
SOX1-201ENST00000330949 H0Y9J4 135 aa15.12■□□□□ 0.01
SOX1-201ENST00000330949 LYSTQ99698 3801 aa15.12■□□□□ 0.01
SOX1-201ENST00000330949 TP53AIP1Q9HCN2 124 aa15.09■□□□□ 0.01
SOX1-201ENST00000330949 MGAM2Q2M2H8 2515 aa15.07■□□□□ 0
SOX1-201ENST00000330949 SPINK7P58062 85 aa15.07■□□□□ 0
SOX1-201ENST00000330949 KRTAP24-1Q3LI83 254 aa15.05■□□□□ -0
SOX1-201ENST00000330949 DNAH3Q8TD57 4116 aa15.03■□□□□ -0
SOX1-201ENST00000330949 SPRR1BP22528 89 aa15.02□□□□□ -0.01
SOX1-201ENST00000330949 C4orf48Q5BLP8 95 aa15.01□□□□□ -0.01
SOX1-201ENST00000330949 TENM2Q9NT68 2774 aa15.01□□□□□ -0.01
SOX1-201ENST00000330949 Q6ZR54 194 aa15□□□□□ -0.01
SOX1-201ENST00000330949 DNAH10Q8IVF4 4471 aa14.98□□□□□ -0.01
SOX1-201ENST00000330949 HRES1P13985 223 aa14.98□□□□□ -0.01
SOX1-201ENST00000330949 SRRM2Q9UQ35 2752 aaKnown RBP14.97□□□□□ -0.01
SOX1-201ENST00000330949 STAB2Q8WWQ8 2551 aa14.97□□□□□ -0.01
SOX1-201ENST00000330949 IGKV2-24A0A0C4DH68 120 aa14.97□□□□□ -0.01
SOX1-201ENST00000330949 ASB16-AS1Q495Z4 193 aa14.96□□□□□ -0.01
SOX1-201ENST00000330949 C8orf87E5RJ46 101 aa14.93□□□□□ -0.02
SOX1-201ENST00000330949 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
SOX1-201ENST00000330949 DNAH1Q9P2D7 4330 aa14.92□□□□□ -0.02
SOX1-201ENST00000330949 A0A096LNI7 61 aa14.91□□□□□ -0.02
SOX1-201ENST00000330949 COL7A1Q02388 2944 aa14.89□□□□□ -0.03
SOX1-201ENST00000330949 LINC00313P59037 77 aa14.88□□□□□ -0.03
SOX1-201ENST00000330949 C8orf17Q9NRJ1 99 aa14.86□□□□□ -0.03
SOX1-201ENST00000330949 Q96NJ1 140 aa14.81□□□□□ -0.04
SOX1-201ENST00000330949 DNAH9Q9NYC9 4486 aa14.79□□□□□ -0.04
SOX1-201ENST00000330949 PRAC1Q96KF2 57 aa14.75□□□□□ -0.05
SOX1-201ENST00000330949 KRTAP11-1Q8IUC1 163 aa14.75□□□□□ -0.05
SOX1-201ENST00000330949 PRR26Q8N8Z3 221 aa14.74□□□□□ -0.05
SOX1-201ENST00000330949 DNAH7Q8WXX0 4024 aa14.74□□□□□ -0.05
SOX1-201ENST00000330949 PLA2G1BP04054 148 aaKnown RBP14.74□□□□□ -0.05
SOX1-201ENST00000330949 MRPL34Q9BQ48 92 aaKnown RBP14.73□□□□□ -0.05
SOX1-201ENST00000330949 A0A1B0GVX0 72 aa14.73□□□□□ -0.05
SOX1-201ENST00000330949 IGHV6-1A0A0B4J1U7 121 aa14.72□□□□□ -0.05
SOX1-201ENST00000330949 KRTAP1-5Q9BYS1 174 aa14.7□□□□□ -0.06
SOX1-201ENST00000330949 K7EIL1 84 aa14.69□□□□□ -0.06
SOX1-201ENST00000330949 CDK2AP2O75956 126 aa14.68□□□□□ -0.06
SOX1-201ENST00000330949 LINC01554Q52M75 96 aa14.67□□□□□ -0.06
SOX1-201ENST00000330949 MDFIQ99750 246 aa14.66□□□□□ -0.06
SOX1-201ENST00000330949 CHTF8P0CG12 524 aa14.65□□□□□ -0.06
SOX1-201ENST00000330949 ACYP2P14621 99 aa14.65□□□□□ -0.06
SOX1-201ENST00000330949 ADM2Q7Z4H4 148 aa14.62□□□□□ -0.07
SOX1-201ENST00000330949 A0A087X002 238 aa14.62□□□□□ -0.07
SOX1-201ENST00000330949 IGLV9-49A0A0B4J1Y8 123 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms