RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 K7EQZ3 153 aa9.7□□□□□ -0.86
BRCC3-201ENST00000330045 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
BRCC3-201ENST00000330045 KRTAP1-5Q9BYS1 174 aa9.69□□□□□ -0.86
BRCC3-201ENST00000330045 PRLHP81277 87 aa9.68□□□□□ -0.86
BRCC3-201ENST00000330045 A0A0G2JQZ4 141 aa9.68□□□□□ -0.86
BRCC3-201ENST00000330045 CNBPP62633 177 aaKnown RBP9.68□□□□□ -0.86
BRCC3-201ENST00000330045 IGFL1Q6UW32 110 aa9.68□□□□□ -0.86
BRCC3-201ENST00000330045 PSCAO43653 123 aa9.67□□□□□ -0.86
BRCC3-201ENST00000330045 FP248Q71RG6 208 aaPredicted RBP9.67□□□□□ -0.86
BRCC3-201ENST00000330045 LCE6AA0A183 80 aa9.66□□□□□ -0.86
BRCC3-201ENST00000330045 IGLV8-61A0A075B6I0 122 aa9.63□□□□□ -0.87
BRCC3-201ENST00000330045 LINC00474Q9P2X8 69 aa9.63□□□□□ -0.87
BRCC3-201ENST00000330045 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-201ENST00000330045 HCG22E2RYF7 251 aa9.62□□□□□ -0.87
BRCC3-201ENST00000330045 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
BRCC3-201ENST00000330045 A0A087WSZ3 146 aa9.61□□□□□ -0.87
BRCC3-201ENST00000330045 DEFB116Q30KQ4 102 aa9.61□□□□□ -0.87
BRCC3-201ENST00000330045 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
BRCC3-201ENST00000330045 TGP01266 2768 aa9.6□□□□□ -0.87
BRCC3-201ENST00000330045 UBE2AP49459 152 aa9.6□□□□□ -0.87
BRCC3-201ENST00000330045 PHF5AQ7RTV0 110 aaKnown RBP9.59□□□□□ -0.87
BRCC3-201ENST00000330045 APLNQ9ULZ1 77 aa9.59□□□□□ -0.87
BRCC3-201ENST00000330045 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
BRCC3-201ENST00000330045 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
BRCC3-201ENST00000330045 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
BRCC3-201ENST00000330045 FAM229BQ4G0N7 80 aa9.58□□□□□ -0.88
BRCC3-201ENST00000330045 ZCCHC13Q8WW36 166 aaKnown RBP9.58□□□□□ -0.88
BRCC3-201ENST00000330045 VPS13DQ5THJ4 4388 aa9.56□□□□□ -0.88
BRCC3-201ENST00000330045 H0Y9J4 135 aa9.55□□□□□ -0.88
BRCC3-201ENST00000330045 KMT2AQ03164 3969 aa9.54□□□□□ -0.88
BRCC3-201ENST00000330045 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
BRCC3-201ENST00000330045 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
BRCC3-201ENST00000330045 SPRR1BP22528 89 aa9.54□□□□□ -0.88
BRCC3-201ENST00000330045 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
BRCC3-201ENST00000330045 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
BRCC3-201ENST00000330045 MPLKIPQ8TAP9 179 aa9.51□□□□□ -0.89
BRCC3-201ENST00000330045 DNAH2Q9P225 4427 aa9.49□□□□□ -0.89
BRCC3-201ENST00000330045 LRCOL1A6NCL2 159 aa9.49□□□□□ -0.89
BRCC3-201ENST00000330045 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
BRCC3-201ENST00000330045 hDV103S1A0JD37 113 aa9.48□□□□□ -0.89
BRCC3-201ENST00000330045 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
BRCC3-201ENST00000330045 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
BRCC3-201ENST00000330045 PRO0628Q9UI54 55 aa9.47□□□□□ -0.89
BRCC3-201ENST00000330045 MP68P56378 58 aa9.46□□□□□ -0.89
BRCC3-201ENST00000330045 PRR15Q8IV56 129 aa9.46□□□□□ -0.89
BRCC3-201ENST00000330045 C1orf64Q8NEQ6 169 aa9.46□□□□□ -0.89
BRCC3-201ENST00000330045 LINC00472Q9H8W2 130 aa9.46□□□□□ -0.9
BRCC3-201ENST00000330045 NDUFB1O75438 58 aa9.45□□□□□ -0.9
BRCC3-201ENST00000330045 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
BRCC3-201ENST00000330045 NBDYA0A0U1RRE5 68 aa9.44□□□□□ -0.9
BRCC3-201ENST00000330045 NUPR2A6NF83 97 aa9.44□□□□□ -0.9
BRCC3-201ENST00000330045 A8MWP4 228 aa9.44□□□□□ -0.9
BRCC3-201ENST00000330045 PANO1I0J062 215 aa9.44□□□□□ -0.9
BRCC3-201ENST00000330045 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
BRCC3-201ENST00000330045 KRTAP13-1Q8IUC0 172 aa9.42□□□□□ -0.9
BRCC3-201ENST00000330045 LINC00208Q96KT6 92 aa9.42□□□□□ -0.9
BRCC3-201ENST00000330045 PRR4Q16378 134 aa9.41□□□□□ -0.9
BRCC3-201ENST00000330045 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
BRCC3-201ENST00000330045 Q6ZRN7 208 aaPredicted RBP9.41□□□□□ -0.9
BRCC3-201ENST00000330045 H0Y9P7 68 aa9.39□□□□□ -0.91
BRCC3-201ENST00000330045 H3BPC8 53 aa9.37□□□□□ -0.91
BRCC3-201ENST00000330045 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
BRCC3-201ENST00000330045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
BRCC3-201ENST00000330045 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
BRCC3-201ENST00000330045 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
BRCC3-201ENST00000330045 Q1T7F1 81 aa9.35□□□□□ -0.91
BRCC3-201ENST00000330045 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
BRCC3-201ENST00000330045 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
BRCC3-201ENST00000330045 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
BRCC3-201ENST00000330045 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
BRCC3-201ENST00000330045 SPANXA2-OT1Q8N9U9 137 aa9.31□□□□□ -0.92
BRCC3-201ENST00000330045 Q96NJ1 140 aa9.3□□□□□ -0.92
BRCC3-201ENST00000330045 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
BRCC3-201ENST00000330045 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
BRCC3-201ENST00000330045 A0A087WTM6 91 aa9.28□□□□□ -0.92
BRCC3-201ENST00000330045 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-201ENST00000330045 MOBPQ13875 183 aa9.25□□□□□ -0.93
BRCC3-201ENST00000330045 LY6G6CO95867 125 aa9.24□□□□□ -0.93
BRCC3-201ENST00000330045 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
BRCC3-201ENST00000330045 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
BRCC3-201ENST00000330045 PSPHP1O15172 72 aa9.24□□□□□ -0.93
BRCC3-201ENST00000330045 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
BRCC3-201ENST00000330045 IGLV5-52A0A0A0MRZ9 124 aa9.23□□□□□ -0.93
BRCC3-201ENST00000330045 RTL8CO15255 209 aa9.23□□□□□ -0.93
BRCC3-201ENST00000330045 Q6ZR54 194 aa9.23□□□□□ -0.93
BRCC3-201ENST00000330045 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
BRCC3-201ENST00000330045 DNAH6Q9C0G6 4158 aa9.22□□□□□ -0.93
BRCC3-201ENST00000330045 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
BRCC3-201ENST00000330045 FRAS1Q86XX4 4008 aa9.22□□□□□ -0.93
BRCC3-201ENST00000330045 V9GYY9 64 aa9.22□□□□□ -0.93
BRCC3-201ENST00000330045 DNAH11Q96DT5 4516 aa9.2□□□□□ -0.94
BRCC3-201ENST00000330045 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
BRCC3-201ENST00000330045 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
BRCC3-201ENST00000330045 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
BRCC3-201ENST00000330045 ZNF861PO60384 105 aa9.19□□□□□ -0.94
BRCC3-201ENST00000330045 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
BRCC3-201ENST00000330045 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
BRCC3-201ENST00000330045 ALMS1Q8TCU4 4167 aa9.18□□□□□ -0.94
BRCC3-201ENST00000330045 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
BRCC3-201ENST00000330045 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms