RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ANGP03950 147 aaKnown RBP7.67□□□□□ -1.18
SHMT2-201ENST00000328923 ANK2Q01484 3957 aa7.67□□□□□ -1.18
SHMT2-201ENST00000328923 LINC01558Q9Y6Z2 57 aa7.67□□□□□ -1.18
SHMT2-201ENST00000328923 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
SHMT2-201ENST00000328923 H0Y9P7 68 aa7.64□□□□□ -1.19
SHMT2-201ENST00000328923 KRTAP24-1Q3LI83 254 aa7.64□□□□□ -1.19
SHMT2-201ENST00000328923 Q8N377 158 aa7.64□□□□□ -1.19
SHMT2-201ENST00000328923 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
SHMT2-201ENST00000328923 WFDC10BQ8IUB3 73 aa7.64□□□□□ -1.19
SHMT2-201ENST00000328923 PLA2G1BP04054 148 aaKnown RBP7.63□□□□□ -1.19
SHMT2-201ENST00000328923 A0A096LPF7 62 aa7.62□□□□□ -1.19
SHMT2-201ENST00000328923 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
SHMT2-201ENST00000328923 A0A1B0GW54 56 aa7.62□□□□□ -1.19
SHMT2-201ENST00000328923 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
SHMT2-201ENST00000328923 PRR34Q9NV39 138 aa7.6□□□□□ -1.19
SHMT2-201ENST00000328923 C6orf48Q9UBA6 75 aa7.6□□□□□ -1.19
SHMT2-201ENST00000328923 X6R8D5 127 aa7.6□□□□□ -1.19
SHMT2-201ENST00000328923 C1orf137Q5JT78 98 aa7.6□□□□□ -1.19
SHMT2-201ENST00000328923 Q8NBF4 154 aa7.6□□□□□ -1.19
SHMT2-201ENST00000328923 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
SHMT2-201ENST00000328923 C7orf33Q8WU49 177 aa7.58□□□□□ -1.2
SHMT2-201ENST00000328923 LELP1Q5T871 98 aa7.57□□□□□ -1.2
SHMT2-201ENST00000328923 CNBPP62633 177 aaKnown RBP7.57□□□□□ -1.2
SHMT2-201ENST00000328923 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
SHMT2-201ENST00000328923 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
SHMT2-201ENST00000328923 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
SHMT2-201ENST00000328923 H3BPC8 53 aa7.55□□□□□ -1.2
SHMT2-201ENST00000328923 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
SHMT2-201ENST00000328923 MGAM2Q2M2H8 2515 aa7.54□□□□□ -1.2
SHMT2-201ENST00000328923 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
SHMT2-201ENST00000328923 TNP2Q05952 138 aa7.53□□□□□ -1.2
SHMT2-201ENST00000328923 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-201ENST00000328923 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-201ENST00000328923 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
SHMT2-201ENST00000328923 PCOTHQ58A44 107 aa7.52□□□□□ -1.21
SHMT2-201ENST00000328923 A0A0G2JQZ4 141 aa7.52□□□□□ -1.21
SHMT2-201ENST00000328923 A0A1W2PNN7 141 aa7.52□□□□□ -1.21
SHMT2-201ENST00000328923 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
SHMT2-201ENST00000328923 RTL8CO15255 209 aa7.51□□□□□ -1.21
SHMT2-201ENST00000328923 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
SHMT2-201ENST00000328923 CAMK2N2Q96S95 79 aa7.5□□□□□ -1.21
SHMT2-201ENST00000328923 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
SHMT2-201ENST00000328923 Q6ZR54 194 aa7.47□□□□□ -1.21
SHMT2-201ENST00000328923 IGLV5-37A0A075B6J1 123 aa7.47□□□□□ -1.21
SHMT2-201ENST00000328923 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.21
SHMT2-201ENST00000328923 TGP01266 2768 aa7.46□□□□□ -1.22
SHMT2-201ENST00000328923 HRES1P13985 223 aa7.46□□□□□ -1.22
SHMT2-201ENST00000328923 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
SHMT2-201ENST00000328923 H0Y9J4 135 aa7.45□□□□□ -1.22
SHMT2-201ENST00000328923 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
SHMT2-201ENST00000328923 DEFB135Q30KP9 77 aa7.44□□□□□ -1.22
SHMT2-201ENST00000328923 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
SHMT2-201ENST00000328923 SPART-AS1P0CW21 52 aa7.43□□□□□ -1.22
SHMT2-201ENST00000328923 DEFB4AO15263 64 aa7.42□□□□□ -1.22
SHMT2-201ENST00000328923 Q6ZRX8 168 aa7.42□□□□□ -1.22
SHMT2-201ENST00000328923 A0A087WSZ3 146 aa7.41□□□□□ -1.22
SHMT2-201ENST00000328923 C1orf134Q5TEV5 83 aa7.41□□□□□ -1.22
SHMT2-201ENST00000328923 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
SHMT2-201ENST00000328923 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
SHMT2-201ENST00000328923 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
SHMT2-201ENST00000328923 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
SHMT2-201ENST00000328923 SPRR1AP35321 89 aa7.38□□□□□ -1.23
SHMT2-201ENST00000328923 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
SHMT2-201ENST00000328923 HTN3P15516 51 aa7.38□□□□□ -1.23
SHMT2-201ENST00000328923 OXLD1Q5BKU9 147 aa7.38□□□□□ -1.23
SHMT2-201ENST00000328923 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
SHMT2-201ENST00000328923 H3BNG1 76 aa7.37□□□□□ -1.23
SHMT2-201ENST00000328923 TENM3Q9P273 2699 aa7.37□□□□□ -1.23
SHMT2-201ENST00000328923 TLX1NBP0CAT3 122 aa7.36□□□□□ -1.23
SHMT2-201ENST00000328923 A0A087X002 238 aa7.36□□□□□ -1.23
SHMT2-201ENST00000328923 KRTAP10-11P60412 298 aa7.35□□□□□ -1.23
SHMT2-201ENST00000328923 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
SHMT2-201ENST00000328923 DNAH3Q8TD57 4116 aa7.32□□□□□ -1.24
SHMT2-201ENST00000328923 A8MWP4 228 aa7.32□□□□□ -1.24
SHMT2-201ENST00000328923 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
SHMT2-201ENST00000328923 IGKV2-24A0A0C4DH68 120 aa7.3□□□□□ -1.24
SHMT2-201ENST00000328923 ROMO1P60602 79 aa7.3□□□□□ -1.24
SHMT2-201ENST00000328923 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
SHMT2-201ENST00000328923 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
SHMT2-201ENST00000328923 ALMS1Q8TCU4 4167 aa7.29□□□□□ -1.24
SHMT2-201ENST00000328923 IGLV8-61A0A075B6I0 122 aa7.27□□□□□ -1.25
SHMT2-201ENST00000328923 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.25
SHMT2-201ENST00000328923 FAM168BA1KXE4 195 aa7.27□□□□□ -1.25
SHMT2-201ENST00000328923 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
SHMT2-201ENST00000328923 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
SHMT2-201ENST00000328923 DEFB131BA0A096LNP1 70 aa7.25□□□□□ -1.25
SHMT2-201ENST00000328923 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
SHMT2-201ENST00000328923 LYSTQ99698 3801 aa7.25□□□□□ -1.25
SHMT2-201ENST00000328923 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
SHMT2-201ENST00000328923 A0A1B0GU69 56 aa7.24□□□□□ -1.25
SHMT2-201ENST00000328923 CSMD3Q7Z407 3707 aa7.23□□□□□ -1.25
SHMT2-201ENST00000328923 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
SHMT2-201ENST00000328923 ZNF861PO60384 105 aa7.23□□□□□ -1.25
SHMT2-201ENST00000328923 DNAH10OSP0CZ25 163 aa7.2□□□□□ -1.26
SHMT2-201ENST00000328923 TP53AIP1Q9HCN2 124 aa7.2□□□□□ -1.26
SHMT2-201ENST00000328923 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
SHMT2-201ENST00000328923 UQCR11O14957 56 aa7.18□□□□□ -1.26
SHMT2-201ENST00000328923 P0C880 135 aa7.17□□□□□ -1.26
SHMT2-201ENST00000328923 SRRM2Q9UQ35 2752 aaKnown RBP7.15□□□□□ -1.26
SHMT2-201ENST00000328923 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms