RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 KRTAP7-1Q8IUC3 87 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 DNAH2Q9P225 4427 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 RYR2Q92736 4967 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
DDX39A-202ENST00000324340 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
DDX39A-202ENST00000324340 FAM168BA1KXE4 195 aa8.09□□□□□ -1.12
DDX39A-202ENST00000324340 M0R378 163 aa8.09□□□□□ -1.12
DDX39A-202ENST00000324340 COX7BP24311 80 aa8.09□□□□□ -1.12
DDX39A-202ENST00000324340 KRTAP10-2P60368 255 aa8.09□□□□□ -1.12
DDX39A-202ENST00000324340 Q1T7F1 81 aa8.09□□□□□ -1.12
DDX39A-202ENST00000324340 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
DDX39A-202ENST00000324340 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
DDX39A-202ENST00000324340 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
DDX39A-202ENST00000324340 NKAPP1Q8N9T2 125 aa8.07□□□□□ -1.12
DDX39A-202ENST00000324340 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
DDX39A-202ENST00000324340 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
DDX39A-202ENST00000324340 PANO1I0J062 215 aa8.05□□□□□ -1.12
DDX39A-202ENST00000324340 C7orf33Q8WU49 177 aa8.05□□□□□ -1.12
DDX39A-202ENST00000324340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
DDX39A-202ENST00000324340 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
DDX39A-202ENST00000324340 PMAIP1Q13794 54 aa8.04□□□□□ -1.12
DDX39A-202ENST00000324340 Q6ZQY7 126 aa8.04□□□□□ -1.12
DDX39A-202ENST00000324340 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
DDX39A-202ENST00000324340 DIRC1Q969H9 104 aa8.04□□□□□ -1.12
DDX39A-202ENST00000324340 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
DDX39A-202ENST00000324340 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
DDX39A-202ENST00000324340 IGKV4-1P06312 121 aa8.03□□□□□ -1.12
DDX39A-202ENST00000324340 IGLV1-50A0A075B6I6 118 aa8.02□□□□□ -1.13
DDX39A-202ENST00000324340 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
DDX39A-202ENST00000324340 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
DDX39A-202ENST00000324340 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
DDX39A-202ENST00000324340 ELOF1P60002 83 aaKnown RBP8□□□□□ -1.13
DDX39A-202ENST00000324340 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
DDX39A-202ENST00000324340 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
DDX39A-202ENST00000324340 Q6ZSA8 131 aa7.99□□□□□ -1.13
DDX39A-202ENST00000324340 PLAC8Q9NZF1 115 aa7.99□□□□□ -1.13
DDX39A-202ENST00000324340 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
DDX39A-202ENST00000324340 MPLKIPQ8TAP9 179 aa7.98□□□□□ -1.13
DDX39A-202ENST00000324340 FAT2Q9NYQ8 4349 aa7.98□□□□□ -1.13
DDX39A-202ENST00000324340 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
DDX39A-202ENST00000324340 SPRR1AP35321 89 aa7.97□□□□□ -1.13
DDX39A-202ENST00000324340 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
DDX39A-202ENST00000324340 CD164Q04900 197 aa7.97□□□□□ -1.13
DDX39A-202ENST00000324340 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
DDX39A-202ENST00000324340 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
DDX39A-202ENST00000324340 ZCCHC13Q8WW36 166 aaKnown RBP7.96□□□□□ -1.14
DDX39A-202ENST00000324340 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
DDX39A-202ENST00000324340 NDUFB1O75438 58 aa7.95□□□□□ -1.14
DDX39A-202ENST00000324340 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
DDX39A-202ENST00000324340 HECTD4Q9Y4D8 3996 aa7.94□□□□□ -1.14
DDX39A-202ENST00000324340 PKD1P98161 4303 aa7.93□□□□□ -1.14
DDX39A-202ENST00000324340 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
DDX39A-202ENST00000324340 KRTAP11-1Q8IUC1 163 aa7.93□□□□□ -1.14
DDX39A-202ENST00000324340 UBE2BP63146 152 aa7.92□□□□□ -1.14
DDX39A-202ENST00000324340 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
DDX39A-202ENST00000324340 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
DDX39A-202ENST00000324340 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
DDX39A-202ENST00000324340 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
DDX39A-202ENST00000324340 HIGD2AQ9BW72 106 aa7.91□□□□□ -1.14
DDX39A-202ENST00000324340 Q6ZRX8 168 aa7.9□□□□□ -1.14
DDX39A-202ENST00000324340 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
DDX39A-202ENST00000324340 C1orf64Q8NEQ6 169 aa7.89□□□□□ -1.15
DDX39A-202ENST00000324340 H0Y9J4 135 aa7.87□□□□□ -1.15
DDX39A-202ENST00000324340 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
DDX39A-202ENST00000324340 DHRS4-AS1Q9P1J3 65 aa7.86□□□□□ -1.15
DDX39A-202ENST00000324340 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
DDX39A-202ENST00000324340 H3BPC8 53 aa7.85□□□□□ -1.15
DDX39A-202ENST00000324340 Q9BRP9 147 aa7.85□□□□□ -1.15
DDX39A-202ENST00000324340 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
DDX39A-202ENST00000324340 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
DDX39A-202ENST00000324340 PSORS1C2Q9UIG4 136 aa7.84□□□□□ -1.15
DDX39A-202ENST00000324340 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.16
DDX39A-202ENST00000324340 UBE2AP49459 152 aa7.83□□□□□ -1.16
DDX39A-202ENST00000324340 PRLHP81277 87 aa7.83□□□□□ -1.16
DDX39A-202ENST00000324340 SMIM29Q86T20 159 aa7.83□□□□□ -1.16
DDX39A-202ENST00000324340 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
DDX39A-202ENST00000324340 SPRR4Q96PI1 79 aa7.82□□□□□ -1.16
DDX39A-202ENST00000324340 NDUFS5O43920 106 aa7.81□□□□□ -1.16
DDX39A-202ENST00000324340 Q8N9L7 120 aa7.81□□□□□ -1.16
DDX39A-202ENST00000324340 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
DDX39A-202ENST00000324340 Q8NBF4 154 aa7.79□□□□□ -1.16
DDX39A-202ENST00000324340 KTN1-AS1Q86SY8 53 aa7.78□□□□□ -1.16
DDX39A-202ENST00000324340 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
DDX39A-202ENST00000324340 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
DDX39A-202ENST00000324340 MP68P56378 58 aa7.77□□□□□ -1.17
DDX39A-202ENST00000324340 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
DDX39A-202ENST00000324340 ZNF861PO60384 105 aa7.76□□□□□ -1.17
DDX39A-202ENST00000324340 Q8N377 158 aa7.76□□□□□ -1.17
DDX39A-202ENST00000324340 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
DDX39A-202ENST00000324340 Q5VV11 94 aa7.75□□□□□ -1.17
DDX39A-202ENST00000324340 PKHD1P08F94 4074 aa7.75□□□□□ -1.17
DDX39A-202ENST00000324340 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
DDX39A-202ENST00000324340 ST20-AS1Q8NBB2 130 aa7.74□□□□□ -1.17
DDX39A-202ENST00000324340 DSCR10P59022 87 aa7.73□□□□□ -1.17
DDX39A-202ENST00000324340 PSPHP1O15172 72 aa7.72□□□□□ -1.17
DDX39A-202ENST00000324340 CDK2AP2O75956 126 aa7.72□□□□□ -1.17
DDX39A-202ENST00000324340 Q75L30 129 aa7.72□□□□□ -1.17
DDX39A-202ENST00000324340 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
DDX39A-202ENST00000324340 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms