RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 CSMD3Q7Z407 3707 aa10.5□□□□□ -0.73
PDE1C-201ENST00000321453 CASC2Q6XLA1 102 aa10.49□□□□□ -0.73
PDE1C-201ENST00000321453 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
PDE1C-201ENST00000321453 SPRR1AP35321 89 aa10.48□□□□□ -0.73
PDE1C-201ENST00000321453 FBN1P35555 2871 aaKnown RBP10.48□□□□□ -0.73
PDE1C-201ENST00000321453 LIMD2Q9BT23 127 aa10.48□□□□□ -0.73
PDE1C-201ENST00000321453 PCOTHQ58A44 107 aa10.46□□□□□ -0.73
PDE1C-201ENST00000321453 TENM4Q6N022 2769 aa10.46□□□□□ -0.73
PDE1C-201ENST00000321453 FASNP49327 2511 aaKnown RBP10.46□□□□□ -0.74
PDE1C-201ENST00000321453 A0A096LNI7 61 aa10.45□□□□□ -0.74
PDE1C-201ENST00000321453 COA5Q86WW8 74 aa10.45□□□□□ -0.74
PDE1C-201ENST00000321453 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
PDE1C-201ENST00000321453 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
PDE1C-201ENST00000321453 CNBPP62633 177 aaKnown RBP10.44□□□□□ -0.74
PDE1C-201ENST00000321453 SPAG11AQ6PDA7 123 aa10.41□□□□□ -0.74
PDE1C-201ENST00000321453 FLNBO75369 2602 aaKnown RBP10.4□□□□□ -0.74
PDE1C-201ENST00000321453 LINC01556Q5JQF7 62 aa10.4□□□□□ -0.74
PDE1C-201ENST00000321453 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
PDE1C-201ENST00000321453 IGKV2-24A0A0C4DH68 120 aa10.4□□□□□ -0.74
PDE1C-201ENST00000321453 H0Y9J4 135 aa10.39□□□□□ -0.75
PDE1C-201ENST00000321453 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
PDE1C-201ENST00000321453 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
PDE1C-201ENST00000321453 TLX1NBP0CAT3 122 aa10.37□□□□□ -0.75
PDE1C-201ENST00000321453 Q75L30 129 aa10.37□□□□□ -0.75
PDE1C-201ENST00000321453 HELZ2Q9BYK8 2649 aaKnown RBP10.37□□□□□ -0.75
PDE1C-201ENST00000321453 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
PDE1C-201ENST00000321453 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
PDE1C-201ENST00000321453 A6NN06 94 aa10.36□□□□□ -0.75
PDE1C-201ENST00000321453 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
PDE1C-201ENST00000321453 ANK2Q01484 3957 aa10.35□□□□□ -0.75
PDE1C-201ENST00000321453 COL7A1Q02388 2944 aa10.32□□□□□ -0.76
PDE1C-201ENST00000321453 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
PDE1C-201ENST00000321453 A8MWP4 228 aa10.31□□□□□ -0.76
PDE1C-201ENST00000321453 H3BNG1 76 aa10.31□□□□□ -0.76
PDE1C-201ENST00000321453 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
PDE1C-201ENST00000321453 MOBPQ13875 183 aa10.3□□□□□ -0.76
PDE1C-201ENST00000321453 OXLD1Q5BKU9 147 aa10.3□□□□□ -0.76
PDE1C-201ENST00000321453 SPINK7P58062 85 aa10.3□□□□□ -0.76
PDE1C-201ENST00000321453 CDC42SE1Q9NRR8 79 aa10.3□□□□□ -0.76
PDE1C-201ENST00000321453 H3BPC8 53 aa10.29□□□□□ -0.76
PDE1C-201ENST00000321453 MAST4O15021 2626 aa10.29□□□□□ -0.76
PDE1C-201ENST00000321453 DNAH10Q8IVF4 4471 aa10.28□□□□□ -0.76
PDE1C-201ENST00000321453 IGLV7-46A0A075B6I9 117 aa10.28□□□□□ -0.76
PDE1C-201ENST00000321453 NDUFS5O43920 106 aa10.27□□□□□ -0.77
PDE1C-201ENST00000321453 MMP24-AS1A0A0U1RRL7 71 aa10.26□□□□□ -0.77
PDE1C-201ENST00000321453 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
PDE1C-201ENST00000321453 DNAH10OSP0CZ25 163 aa10.26□□□□□ -0.77
PDE1C-201ENST00000321453 NSD1Q96L73 2696 aaPredicted RBP10.25□□□□□ -0.77
PDE1C-201ENST00000321453 NOTCH1P46531 2555 aa10.25□□□□□ -0.77
PDE1C-201ENST00000321453 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
PDE1C-201ENST00000321453 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
PDE1C-201ENST00000321453 HECTD1Q9ULT8 2610 aa10.24□□□□□ -0.77
PDE1C-201ENST00000321453 COL6A5A8TX70 2615 aa10.24□□□□□ -0.77
PDE1C-201ENST00000321453 PHF5AQ7RTV0 110 aaKnown RBP10.24□□□□□ -0.77
PDE1C-201ENST00000321453 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
PDE1C-201ENST00000321453 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
PDE1C-201ENST00000321453 INAFM1C9JVW0 142 aa10.22□□□□□ -0.77
PDE1C-201ENST00000321453 CHTF8P0CG12 524 aa10.22□□□□□ -0.77
PDE1C-201ENST00000321453 KRTAP10-11P60412 298 aa10.2□□□□□ -0.78
PDE1C-201ENST00000321453 LINC01558Q9Y6Z2 57 aa10.2□□□□□ -0.78
PDE1C-201ENST00000321453 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
PDE1C-201ENST00000321453 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
PDE1C-201ENST00000321453 LYSTQ99698 3801 aa10.18□□□□□ -0.78
PDE1C-201ENST00000321453 HRES1P13985 223 aa10.18□□□□□ -0.78
PDE1C-201ENST00000321453 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.79
PDE1C-201ENST00000321453 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
PDE1C-201ENST00000321453 IGHV6-1A0A0B4J1U7 121 aa10.14□□□□□ -0.79
PDE1C-201ENST00000321453 NBEAL1Q6ZS30 2694 aa10.14□□□□□ -0.79
PDE1C-201ENST00000321453 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
PDE1C-201ENST00000321453 STAB1Q9NY15 2570 aa10.12□□□□□ -0.79
PDE1C-201ENST00000321453 ADM2Q7Z4H4 148 aa10.12□□□□□ -0.79
PDE1C-201ENST00000321453 K7EIL1 84 aa10.11□□□□□ -0.79
PDE1C-201ENST00000321453 LINC00313P59037 77 aa10.09□□□□□ -0.79
PDE1C-201ENST00000321453 C8orf17Q9NRJ1 99 aa10.08□□□□□ -0.8
PDE1C-201ENST00000321453 Q96NJ1 140 aa10.06□□□□□ -0.8
PDE1C-201ENST00000321453 A0A087X002 238 aa10.05□□□□□ -0.8
PDE1C-201ENST00000321453 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
PDE1C-201ENST00000321453 NOTCH2NLQ7Z3S9 236 aa10.05□□□□□ -0.8
PDE1C-201ENST00000321453 KRTAP1-5Q9BYS1 174 aa10.04□□□□□ -0.8
PDE1C-201ENST00000321453 KMT2BQ9UMN6 2715 aaPredicted RBP10.04□□□□□ -0.8
PDE1C-201ENST00000321453 TP53AIP1Q9HCN2 124 aa10.04□□□□□ -0.8
PDE1C-201ENST00000321453 Q6ZR54 194 aa10.03□□□□□ -0.8
PDE1C-201ENST00000321453 SPRR1BP22528 89 aa10.02□□□□□ -0.8
PDE1C-201ENST00000321453 DNAH9Q9NYC9 4486 aa10.01□□□□□ -0.81
PDE1C-201ENST00000321453 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
PDE1C-201ENST00000321453 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
PDE1C-201ENST00000321453 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
PDE1C-201ENST00000321453 A0A1B0GVX0 72 aa9.96□□□□□ -0.81
PDE1C-201ENST00000321453 MRPL34Q9BQ48 92 aaKnown RBP9.96□□□□□ -0.81
PDE1C-201ENST00000321453 PANO1I0J062 215 aa9.96□□□□□ -0.81
PDE1C-201ENST00000321453 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
PDE1C-201ENST00000321453 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
PDE1C-201ENST00000321453 Q5W150 140 aa9.94□□□□□ -0.82
PDE1C-201ENST00000321453 MDFIQ99750 246 aa9.93□□□□□ -0.82
PDE1C-201ENST00000321453 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
PDE1C-201ENST00000321453 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
PDE1C-201ENST00000321453 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
PDE1C-201ENST00000321453 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
PDE1C-201ENST00000321453 FRAS1Q86XX4 4008 aa9.84□□□□□ -0.83
PDE1C-201ENST00000321453 ALMS1Q8TCU4 4167 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms