RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 A0A1B0GW54 56 aa10.91□□□□□ -0.66
COL9A1-201ENST00000320755 DNAH7Q8WXX0 4024 aa10.9□□□□□ -0.66
COL9A1-201ENST00000320755 EPM2AB3EWF7 344 aa10.9□□□□□ -0.66
COL9A1-201ENST00000320755 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.67
COL9A1-201ENST00000320755 NDUFC1O43677 76 aa10.89□□□□□ -0.67
COL9A1-201ENST00000320755 Q5XG85 94 aa10.89□□□□□ -0.67
COL9A1-201ENST00000320755 A0A0U1RQV1 116 aa10.87□□□□□ -0.67
COL9A1-201ENST00000320755 MDFIQ99750 246 aa10.87□□□□□ -0.67
COL9A1-201ENST00000320755 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
COL9A1-201ENST00000320755 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
COL9A1-201ENST00000320755 WFDC13Q8IUB5 93 aa10.86□□□□□ -0.67
COL9A1-201ENST00000320755 PANO1I0J062 215 aa10.85□□□□□ -0.67
COL9A1-201ENST00000320755 C9orf163Q8N9P6 203 aa10.83□□□□□ -0.68
COL9A1-201ENST00000320755 NBDYA0A0U1RRE5 68 aa10.82□□□□□ -0.68
COL9A1-201ENST00000320755 HCG22E2RYF7 251 aa10.81□□□□□ -0.68
COL9A1-201ENST00000320755 LRCOL1A6NCL2 159 aa10.81□□□□□ -0.68
COL9A1-201ENST00000320755 LINC00474Q9P2X8 69 aa10.81□□□□□ -0.68
COL9A1-201ENST00000320755 PLECQ15149 4684 aaKnown RBP10.8□□□□□ -0.68
COL9A1-201ENST00000320755 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
COL9A1-201ENST00000320755 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
COL9A1-201ENST00000320755 IGLV8-61A0A075B6I0 122 aa10.76□□□□□ -0.69
COL9A1-201ENST00000320755 FP248Q71RG6 208 aaPredicted RBP10.76□□□□□ -0.69
COL9A1-201ENST00000320755 SMIM26A0A096LP01 95 aa10.74□□□□□ -0.69
COL9A1-201ENST00000320755 ATP5EP56381 51 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-201ENST00000320755 PRR4Q16378 134 aa10.74□□□□□ -0.69
COL9A1-201ENST00000320755 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.74□□□□□ -0.69
COL9A1-201ENST00000320755 FAM229BQ4G0N7 80 aa10.73□□□□□ -0.69
COL9A1-201ENST00000320755 IGLV9-49A0A0B4J1Y8 123 aa10.72□□□□□ -0.69
COL9A1-201ENST00000320755 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
COL9A1-201ENST00000320755 MPLKIPQ8TAP9 179 aa10.72□□□□□ -0.69
COL9A1-201ENST00000320755 NUPR2A6NF83 97 aa10.71□□□□□ -0.69
COL9A1-201ENST00000320755 TGP01266 2768 aa10.71□□□□□ -0.7
COL9A1-201ENST00000320755 H0Y9J4 135 aa10.7□□□□□ -0.7
COL9A1-201ENST00000320755 SPRR1BP22528 89 aa10.68□□□□□ -0.7
COL9A1-201ENST00000320755 LCE6AA0A183 80 aa10.68□□□□□ -0.7
COL9A1-201ENST00000320755 CASC2Q6XLA1 102 aa10.66□□□□□ -0.7
COL9A1-201ENST00000320755 LINC00208Q96KT6 92 aa10.65□□□□□ -0.7
COL9A1-201ENST00000320755 PRR15Q8IV56 129 aa10.64□□□□□ -0.71
COL9A1-201ENST00000320755 ZCCHC13Q8WW36 166 aaKnown RBP10.64□□□□□ -0.71
COL9A1-201ENST00000320755 LINC00472Q9H8W2 130 aa10.64□□□□□ -0.71
COL9A1-201ENST00000320755 SPACA4Q8TDM5 124 aa10.63□□□□□ -0.71
COL9A1-201ENST00000320755 ANAPC11Q9NYG5 84 aa10.63□□□□□ -0.71
COL9A1-201ENST00000320755 A0A087WTM6 91 aa10.63□□□□□ -0.71
COL9A1-201ENST00000320755 MP68P56378 58 aa10.63□□□□□ -0.71
COL9A1-201ENST00000320755 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
COL9A1-201ENST00000320755 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
COL9A1-201ENST00000320755 DYNC2H1Q8NCM8 4307 aaKnown RBP10.62□□□□□ -0.71
COL9A1-201ENST00000320755 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
COL9A1-201ENST00000320755 A8MWP4 228 aa10.61□□□□□ -0.71
COL9A1-201ENST00000320755 LINC00336Q6ZUF6 198 aa10.61□□□□□ -0.71
COL9A1-201ENST00000320755 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-201ENST00000320755 C1orf64Q8NEQ6 169 aa10.59□□□□□ -0.71
COL9A1-201ENST00000320755 PRKDCP78527 4128 aaKnown RBP10.59□□□□□ -0.71
COL9A1-201ENST00000320755 RTL8CO15255 209 aa10.59□□□□□ -0.71
COL9A1-201ENST00000320755 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
COL9A1-201ENST00000320755 H0Y9P7 68 aa10.57□□□□□ -0.72
COL9A1-201ENST00000320755 PSORS1C2Q9UIG4 136 aa10.57□□□□□ -0.72
COL9A1-201ENST00000320755 hDV103S1A0JD37 113 aa10.55□□□□□ -0.72
COL9A1-201ENST00000320755 KMT2AQ03164 3969 aa10.55□□□□□ -0.72
COL9A1-201ENST00000320755 NDUFB1O75438 58 aa10.54□□□□□ -0.72
COL9A1-201ENST00000320755 MOBPQ13875 183 aa10.54□□□□□ -0.72
COL9A1-201ENST00000320755 TRAV22A0A0B4J277 110 aa10.52□□□□□ -0.73
COL9A1-201ENST00000320755 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.73
COL9A1-201ENST00000320755 MMP24-AS1A0A0U1RRL7 71 aa10.5□□□□□ -0.73
COL9A1-201ENST00000320755 IGLV5-52A0A0A0MRZ9 124 aa10.49□□□□□ -0.73
COL9A1-201ENST00000320755 BRK1Q8WUW1 75 aa10.49□□□□□ -0.73
COL9A1-201ENST00000320755 IGHV6-1A0A0B4J1U7 121 aa10.48□□□□□ -0.73
COL9A1-201ENST00000320755 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
COL9A1-201ENST00000320755 Q96NJ1 140 aa10.47□□□□□ -0.73
COL9A1-201ENST00000320755 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
COL9A1-201ENST00000320755 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
COL9A1-201ENST00000320755 DNAH2Q9P225 4427 aa10.46□□□□□ -0.74
COL9A1-201ENST00000320755 NDUFS5O43920 106 aa10.46□□□□□ -0.74
COL9A1-201ENST00000320755 ZNF861PO60384 105 aa10.45□□□□□ -0.74
COL9A1-201ENST00000320755 LY6G6CO95867 125 aa10.45□□□□□ -0.74
COL9A1-201ENST00000320755 Q6ZR54 194 aa10.44□□□□□ -0.74
COL9A1-201ENST00000320755 ZNF706Q9Y5V0 76 aaPredicted RBP10.44□□□□□ -0.74
COL9A1-201ENST00000320755 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
COL9A1-201ENST00000320755 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
COL9A1-201ENST00000320755 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
COL9A1-201ENST00000320755 SPINK6Q6UWN8 80 aa10.43□□□□□ -0.74
COL9A1-201ENST00000320755 PLAC8Q9NZF1 115 aa10.42□□□□□ -0.74
COL9A1-201ENST00000320755 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
COL9A1-201ENST00000320755 CYP4F30PQ9H0H9 118 aa10.42□□□□□ -0.74
COL9A1-201ENST00000320755 DNAH8Q96JB1 4490 aa10.42□□□□□ -0.74
COL9A1-201ENST00000320755 PSPHP1O15172 72 aa10.42□□□□□ -0.74
COL9A1-201ENST00000320755 PCOTHQ58A44 107 aa10.41□□□□□ -0.74
COL9A1-201ENST00000320755 PRO0628Q9UI54 55 aa10.41□□□□□ -0.74
COL9A1-201ENST00000320755 C8orf17Q9NRJ1 99 aa10.4□□□□□ -0.74
COL9A1-201ENST00000320755 A0A087X002 238 aa10.39□□□□□ -0.75
COL9A1-201ENST00000320755 NOTCH2NLQ7Z3S9 236 aa10.39□□□□□ -0.75
COL9A1-201ENST00000320755 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
COL9A1-201ENST00000320755 H3BPC8 53 aa10.37□□□□□ -0.75
COL9A1-201ENST00000320755 A0A1B0GVX0 72 aa10.36□□□□□ -0.75
COL9A1-201ENST00000320755 DNAH17Q9UFH2 4485 aa10.36□□□□□ -0.75
COL9A1-201ENST00000320755 IGLV7-43P04211 117 aa10.33□□□□□ -0.76
COL9A1-201ENST00000320755 DNHD1Q96M86 4753 aa10.33□□□□□ -0.76
COL9A1-201ENST00000320755 Q1T7F1 81 aa10.32□□□□□ -0.76
COL9A1-201ENST00000320755 SPANXA2-OT1Q8N9U9 137 aa10.31□□□□□ -0.76
COL9A1-201ENST00000320755 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms