RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
SPAST-201ENST00000315285 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
SPAST-201ENST00000315285 CYSTM1Q9H1C7 97 aa8.61□□□□□ -1.03
SPAST-201ENST00000315285 VCANP13611 3396 aa8.59□□□□□ -1.03
SPAST-201ENST00000315285 SZT2Q5T011 3432 aa8.59□□□□□ -1.03
SPAST-201ENST00000315285 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
SPAST-201ENST00000315285 FREM2Q5SZK8 3169 aa8.57□□□□□ -1.04
SPAST-201ENST00000315285 NBEAL1Q6ZS30 2694 aa8.57□□□□□ -1.04
SPAST-201ENST00000315285 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
SPAST-201ENST00000315285 Q1T7F1 81 aa8.56□□□□□ -1.04
SPAST-201ENST00000315285 TNP2Q05952 138 aa8.56□□□□□ -1.04
SPAST-201ENST00000315285 CD164Q04900 197 aa8.55□□□□□ -1.04
SPAST-201ENST00000315285 KRTAP26-1Q6PEX3 210 aa8.54□□□□□ -1.04
SPAST-201ENST00000315285 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
SPAST-201ENST00000315285 KALRNO60229 2985 aa8.54□□□□□ -1.04
SPAST-201ENST00000315285 DNAH14Q0VDD8 3507 aa8.53□□□□□ -1.04
SPAST-201ENST00000315285 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
SPAST-201ENST00000315285 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
SPAST-201ENST00000315285 KTN1-AS1Q86SY8 53 aa8.52□□□□□ -1.05
SPAST-201ENST00000315285 Q8N1X5 172 aa8.52□□□□□ -1.05
SPAST-201ENST00000315285 CDC42SE1Q9NRR8 79 aa8.52□□□□□ -1.05
SPAST-201ENST00000315285 FLNCQ14315 2725 aa8.49□□□□□ -1.05
SPAST-201ENST00000315285 Q5XG85 94 aa8.49□□□□□ -1.05
SPAST-201ENST00000315285 SPRR1BP22528 89 aa8.49□□□□□ -1.05
SPAST-201ENST00000315285 ATMQ13315 3056 aa8.48□□□□□ -1.05
SPAST-201ENST00000315285 ADGRG4Q8IZF6 3080 aa8.48□□□□□ -1.05
SPAST-201ENST00000315285 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
SPAST-201ENST00000315285 FAM229BQ4G0N7 80 aa8.47□□□□□ -1.05
SPAST-201ENST00000315285 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.05
SPAST-201ENST00000315285 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.05
SPAST-201ENST00000315285 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
SPAST-201ENST00000315285 BOD1L1Q8NFC6 3051 aa8.46□□□□□ -1.06
SPAST-201ENST00000315285 HRES1P13985 223 aa8.44□□□□□ -1.06
SPAST-201ENST00000315285 FRYLO94915 3013 aa8.44□□□□□ -1.06
SPAST-201ENST00000315285 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
SPAST-201ENST00000315285 ITPR1Q14643 2758 aa8.44□□□□□ -1.06
SPAST-201ENST00000315285 LCA10Q71F78 164 aa8.41□□□□□ -1.06
SPAST-201ENST00000315285 Q8N9P0 234 aaPredicted RBP8.41□□□□□ -1.06
SPAST-201ENST00000315285 TACC2O95359 2948 aa8.4□□□□□ -1.06
SPAST-201ENST00000315285 J3QL48 77 aa8.4□□□□□ -1.06
SPAST-201ENST00000315285 Q75L30 129 aa8.39□□□□□ -1.07
SPAST-201ENST00000315285 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
SPAST-201ENST00000315285 LRBAP50851 2863 aa8.38□□□□□ -1.07
SPAST-201ENST00000315285 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
SPAST-201ENST00000315285 KRTAP4-16G5E9R7 235 aaPredicted RBP8.36□□□□□ -1.07
SPAST-201ENST00000315285 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
SPAST-201ENST00000315285 OXTP01178 125 aa8.36□□□□□ -1.07
SPAST-201ENST00000315285 DMXL2Q8TDJ6 3036 aa8.34□□□□□ -1.07
SPAST-201ENST00000315285 COX6B2Q6YFQ2 88 aa8.34□□□□□ -1.07
SPAST-201ENST00000315285 NSD1Q96L73 2696 aaPredicted RBP8.34□□□□□ -1.07
SPAST-201ENST00000315285 A0A0D9SG42 100 aa8.32□□□□□ -1.08
SPAST-201ENST00000315285 COL6A3P12111 3177 aa8.32□□□□□ -1.08
SPAST-201ENST00000315285 RBM12B-AS1Q9P1G2 102 aa8.32□□□□□ -1.08
SPAST-201ENST00000315285 ITPR2Q14571 2701 aa8.31□□□□□ -1.08
SPAST-201ENST00000315285 Q5W150 140 aa8.3□□□□□ -1.08
SPAST-201ENST00000315285 Q5VV11 94 aa8.29□□□□□ -1.08
SPAST-201ENST00000315285 STAB2Q8WWQ8 2551 aa8.29□□□□□ -1.08
SPAST-201ENST00000315285 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
SPAST-201ENST00000315285 A0A1B0GU33 70 aa8.26□□□□□ -1.09
SPAST-201ENST00000315285 ASH1LQ9NR48 2969 aaKnown RBP8.26□□□□□ -1.09
SPAST-201ENST00000315285 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
SPAST-201ENST00000315285 UTP20O75691 2785 aaKnown RBP8.25□□□□□ -1.09
SPAST-201ENST00000315285 PANO1I0J062 215 aa8.24□□□□□ -1.09
SPAST-201ENST00000315285 LINC00483Q53H64 154 aa8.24□□□□□ -1.09
SPAST-201ENST00000315285 ZZEF1O43149 2961 aa8.23□□□□□ -1.09
SPAST-201ENST00000315285 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
SPAST-201ENST00000315285 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
SPAST-201ENST00000315285 SPEGQ15772 3267 aa8.2□□□□□ -1.1
SPAST-201ENST00000315285 SPINK7P58062 85 aa8.2□□□□□ -1.1
SPAST-201ENST00000315285 Q6ZSA8 131 aa8.18□□□□□ -1.1
SPAST-201ENST00000315285 CFAP47Q6ZTR5 3102 aa8.18□□□□□ -1.1
SPAST-201ENST00000315285 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
SPAST-201ENST00000315285 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
SPAST-201ENST00000315285 Q6ZR54 194 aa8.16□□□□□ -1.1
SPAST-201ENST00000315285 ZANQ9Y493 2812 aa8.15□□□□□ -1.11
SPAST-201ENST00000315285 APCP25054 2843 aa8.13□□□□□ -1.11
SPAST-201ENST00000315285 NIPBLQ6KC79 2804 aaeCLIP8.13□□□□□ -1.11
SPAST-201ENST00000315285 SPTBN5Q9NRC6 3674 aaKnown RBP8.13□□□□□ -1.11
SPAST-201ENST00000315285 EYSQ5T1H1 3165 aa8.13□□□□□ -1.11
SPAST-201ENST00000315285 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
SPAST-201ENST00000315285 KRTAP7-1Q8IUC3 87 aa8.12□□□□□ -1.11
SPAST-201ENST00000315285 HIVEP1P15822 2718 aa8.12□□□□□ -1.11
SPAST-201ENST00000315285 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SPAST-201ENST00000315285 FLG2Q5D862 2391 aaPredicted RBP8.11□□□□□ -1.11
SPAST-201ENST00000315285 KRTAP11-1Q8IUC1 163 aa8.11□□□□□ -1.11
SPAST-201ENST00000315285 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
SPAST-201ENST00000315285 CELSR2Q9HCU4 2923 aa8.11□□□□□ -1.11
SPAST-201ENST00000315285 REV3LO60673 3130 aa8.1□□□□□ -1.11
SPAST-201ENST00000315285 DMXL1Q9Y485 3027 aa8.06□□□□□ -1.12
SPAST-201ENST00000315285 A0A087X002 238 aa8.06□□□□□ -1.12
SPAST-201ENST00000315285 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
SPAST-201ENST00000315285 S4R3F8 94 aa8.05□□□□□ -1.12
SPAST-201ENST00000315285 TNRC18O15417 2968 aaPredicted RBP8.04□□□□□ -1.12
SPAST-201ENST00000315285 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
SPAST-201ENST00000315285 Q6ZRN7 208 aaPredicted RBP8.04□□□□□ -1.12
SPAST-201ENST00000315285 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
SPAST-201ENST00000315285 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
SPAST-201ENST00000315285 LCE6AA0A183 80 aa8.02□□□□□ -1.13
SPAST-201ENST00000315285 LOC400499M0QZD8 3231 aa8.02□□□□□ -1.13
SPAST-201ENST00000315285 DCHS2Q6V1P9 2916 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms