RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 BCE1O60756 84 aa7.2□□□□□ -1.26
PTPN2-201ENST00000309660 TGP01266 2768 aa7.2□□□□□ -1.26
PTPN2-201ENST00000309660 TMEM254Q8TBM7 123 aa7.2□□□□□ -1.26
PTPN2-201ENST00000309660 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
PTPN2-201ENST00000309660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.19□□□□□ -1.26
PTPN2-201ENST00000309660 DSCR10P59022 87 aa7.18□□□□□ -1.26
PTPN2-201ENST00000309660 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
PTPN2-201ENST00000309660 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
PTPN2-201ENST00000309660 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
PTPN2-201ENST00000309660 OXTP01178 125 aa7.17□□□□□ -1.26
PTPN2-201ENST00000309660 Q6ZRN7 208 aaPredicted RBP7.17□□□□□ -1.26
PTPN2-201ENST00000309660 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
PTPN2-201ENST00000309660 OCR1Q9BZK8 76 aa7.16□□□□□ -1.26
PTPN2-201ENST00000309660 LINC00474Q9P2X8 69 aa7.16□□□□□ -1.26
PTPN2-201ENST00000309660 A0A1B0GW54 56 aa7.15□□□□□ -1.26
PTPN2-201ENST00000309660 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.27
PTPN2-201ENST00000309660 A0A087WTM6 91 aa7.14□□□□□ -1.27
PTPN2-201ENST00000309660 HRCT1Q6UXD1 115 aa7.14□□□□□ -1.27
PTPN2-201ENST00000309660 RPS28P62857 69 aaKnown RBP7.13□□□□□ -1.27
PTPN2-201ENST00000309660 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
PTPN2-201ENST00000309660 RTL8CO15255 209 aa7.12□□□□□ -1.27
PTPN2-201ENST00000309660 PRKDCP78527 4128 aaKnown RBP7.12□□□□□ -1.27
PTPN2-201ENST00000309660 HCG22E2RYF7 251 aa7.11□□□□□ -1.27
PTPN2-201ENST00000309660 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
PTPN2-201ENST00000309660 LY6G6CO95867 125 aa7.11□□□□□ -1.27
PTPN2-201ENST00000309660 SPACA4Q8TDM5 124 aa7.1□□□□□ -1.27
PTPN2-201ENST00000309660 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
PTPN2-201ENST00000309660 H0Y9J4 135 aa7.09□□□□□ -1.27
PTPN2-201ENST00000309660 NDUFC1O43677 76 aa7.08□□□□□ -1.28
PTPN2-201ENST00000309660 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
PTPN2-201ENST00000309660 A0A0U1RQV1 116 aa7.07□□□□□ -1.28
PTPN2-201ENST00000309660 IGLV5-52A0A0A0MRZ9 124 aa7.07□□□□□ -1.28
PTPN2-201ENST00000309660 PRR4Q16378 134 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 DNHD1Q96M86 4753 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 SPRR1BP22528 89 aa7.06□□□□□ -1.28
PTPN2-201ENST00000309660 C1orf134Q5TEV5 83 aa7.05□□□□□ -1.28
PTPN2-201ENST00000309660 MOBPQ13875 183 aa7.03□□□□□ -1.28
PTPN2-201ENST00000309660 CASC2Q6XLA1 102 aa7.03□□□□□ -1.28
PTPN2-201ENST00000309660 KRTAP13-1Q8IUC0 172 aa7.03□□□□□ -1.28
PTPN2-201ENST00000309660 KMT2AQ03164 3969 aa7.03□□□□□ -1.28
PTPN2-201ENST00000309660 FBN3Q75N90 2809 aa7.02□□□□□ -1.29
PTPN2-201ENST00000309660 Q6ZR54 194 aa7.02□□□□□ -1.29
PTPN2-201ENST00000309660 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
PTPN2-201ENST00000309660 LINC00208Q96KT6 92 aa7□□□□□ -1.29
PTPN2-201ENST00000309660 A8MWP4 228 aa7□□□□□ -1.29
PTPN2-201ENST00000309660 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
PTPN2-201ENST00000309660 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
PTPN2-201ENST00000309660 MP68P56378 58 aa6.99□□□□□ -1.29
PTPN2-201ENST00000309660 Q5XG85 94 aa6.99□□□□□ -1.29
PTPN2-201ENST00000309660 NDUFB1O75438 58 aa6.99□□□□□ -1.29
PTPN2-201ENST00000309660 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
PTPN2-201ENST00000309660 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
PTPN2-201ENST00000309660 VPS13DQ5THJ4 4388 aa6.98□□□□□ -1.29
PTPN2-201ENST00000309660 ATP5EP56381 51 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-201ENST00000309660 ZNF861PO60384 105 aa6.97□□□□□ -1.29
PTPN2-201ENST00000309660 SPINK6Q6UWN8 80 aa6.97□□□□□ -1.29
PTPN2-201ENST00000309660 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-201ENST00000309660 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.3
PTPN2-201ENST00000309660 PLAC8Q9NZF1 115 aa6.96□□□□□ -1.3
PTPN2-201ENST00000309660 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
PTPN2-201ENST00000309660 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
PTPN2-201ENST00000309660 H0Y9P7 68 aa6.95□□□□□ -1.3
PTPN2-201ENST00000309660 NDUFS5O43920 106 aa6.95□□□□□ -1.3
PTPN2-201ENST00000309660 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
PTPN2-201ENST00000309660 CIRBP-AS1Q8TBR5 109 aa6.95□□□□□ -1.3
PTPN2-201ENST00000309660 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
PTPN2-201ENST00000309660 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
PTPN2-201ENST00000309660 CDK2AP2O75956 126 aa6.94□□□□□ -1.3
PTPN2-201ENST00000309660 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
PTPN2-201ENST00000309660 FP248Q71RG6 208 aaPredicted RBP6.94□□□□□ -1.3
PTPN2-201ENST00000309660 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
PTPN2-201ENST00000309660 LCE6AA0A183 80 aa6.93□□□□□ -1.3
PTPN2-201ENST00000309660 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
PTPN2-201ENST00000309660 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
PTPN2-201ENST00000309660 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
PTPN2-201ENST00000309660 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
PTPN2-201ENST00000309660 LINC00483Q53H64 154 aa6.91□□□□□ -1.3
PTPN2-201ENST00000309660 IGLV7-43P04211 117 aa6.91□□□□□ -1.3
PTPN2-201ENST00000309660 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
PTPN2-201ENST00000309660 Q96NJ1 140 aa6.89□□□□□ -1.31
PTPN2-201ENST00000309660 HECTD4Q9Y4D8 3996 aa6.89□□□□□ -1.31
PTPN2-201ENST00000309660 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
PTPN2-201ENST00000309660 PCOTHQ58A44 107 aa6.87□□□□□ -1.31
PTPN2-201ENST00000309660 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
PTPN2-201ENST00000309660 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
PTPN2-201ENST00000309660 A0A087X002 238 aa6.86□□□□□ -1.31
PTPN2-201ENST00000309660 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
PTPN2-201ENST00000309660 DNAH17Q9UFH2 4485 aa6.86□□□□□ -1.31
PTPN2-201ENST00000309660 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
PTPN2-201ENST00000309660 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.32
PTPN2-201ENST00000309660 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
PTPN2-201ENST00000309660 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
PTPN2-201ENST00000309660 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
PTPN2-201ENST00000309660 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
PTPN2-201ENST00000309660 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
PTPN2-201ENST00000309660 PSPHP1O15172 72 aa6.78□□□□□ -1.32
PTPN2-201ENST00000309660 H3BPC8 53 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms