RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C16orf90A8MZG2 172 aa3.38□□□□□ -1.87
VPS50-202ENST00000305866 RETNQ9HD89 108 aa3.38□□□□□ -1.87
VPS50-202ENST00000305866 CHTF8P0CG12 524 aa3.38□□□□□ -1.87
VPS50-202ENST00000305866 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
VPS50-202ENST00000305866 OXLD1Q5BKU9 147 aa3.37□□□□□ -1.87
VPS50-202ENST00000305866 SONP18583 2426 aaKnown RBP3.37□□□□□ -1.87
VPS50-202ENST00000305866 CREBBPQ92793 2442 aa3.37□□□□□ -1.87
VPS50-202ENST00000305866 MRPL55Q7Z7F7 128 aaKnown RBP3.37□□□□□ -1.87
VPS50-202ENST00000305866 PKIGQ9Y2B9 76 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 HECTD1Q9ULT8 2610 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 HELZ2Q9BYK8 2649 aaKnown RBP3.36□□□□□ -1.87
VPS50-202ENST00000305866 A0A0G2JQZ4 141 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 PSCAO43653 123 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 RPL37AP61513 92 aaKnown RBP3.36□□□□□ -1.87
VPS50-202ENST00000305866 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 Q5VV11 94 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 Q6ZRN7 208 aaPredicted RBP3.36□□□□□ -1.87
VPS50-202ENST00000305866 K7EIL1 84 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 LINC00472Q9H8W2 130 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 APLNQ9ULZ1 77 aa3.36□□□□□ -1.87
VPS50-202ENST00000305866 HYDINQ4G0P3 5121 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 LRCOL1A6NCL2 159 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 LINC00483Q53H64 154 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 IGFL1Q6UW32 110 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 IGKV2D-24A0A075B6R9 120 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 ACANP16112 2415 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
VPS50-202ENST00000305866 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
VPS50-202ENST00000305866 FAM30AQ9NZY2 134 aa3.34□□□□□ -1.87
VPS50-202ENST00000305866 KRTAP1-5Q9BYS1 174 aa3.34□□□□□ -1.88
VPS50-202ENST00000305866 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 NKAPP1Q8N9T2 125 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 ACACBO00763 2458 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 C4orf48Q5BLP8 95 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 LINC00476Q8WZB0 136 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 HTN3P15516 51 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 FUSP35637 526 aaKnown RBP eCLIP3.33□□□□□ -1.88
VPS50-202ENST00000305866 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
VPS50-202ENST00000305866 H3BPC8 53 aa3.32□□□□□ -1.88
VPS50-202ENST00000305866 C14orf177Q52M58 125 aa3.32□□□□□ -1.88
VPS50-202ENST00000305866 SPANXA2-OT1Q8N9U9 137 aa3.32□□□□□ -1.88
VPS50-202ENST00000305866 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
VPS50-202ENST00000305866 ETDCA0A1B0GVM5 59 aa3.32□□□□□ -1.88
VPS50-202ENST00000305866 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
VPS50-202ENST00000305866 HIVEP2P31629 2446 aa3.31□□□□□ -1.88
VPS50-202ENST00000305866 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
VPS50-202ENST00000305866 HCG22E2RYF7 251 aa3.31□□□□□ -1.88
VPS50-202ENST00000305866 LCA10Q71F78 164 aa3.31□□□□□ -1.88
VPS50-202ENST00000305866 A0A096LNI7 61 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 TNXBP22105 4242 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 MTORP42345 2549 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 MEGF8Q7Z7M0 2845 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 Q6ZR54 194 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 B9D2Q9BPU9 175 aa3.3□□□□□ -1.88
VPS50-202ENST00000305866 FAM208BQ5VWN6 2430 aa3.29□□□□□ -1.88
VPS50-202ENST00000305866 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
VPS50-202ENST00000305866 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
VPS50-202ENST00000305866 A6NN06 94 aa3.29□□□□□ -1.88
VPS50-202ENST00000305866 MPLKIPQ8TAP9 179 aa3.29□□□□□ -1.88
VPS50-202ENST00000305866 FLNBO75369 2602 aaKnown RBP3.28□□□□□ -1.88
VPS50-202ENST00000305866 PANO1I0J062 215 aa3.28□□□□□ -1.88
VPS50-202ENST00000305866 HSPG2P98160 4391 aa3.27□□□□□ -1.89
VPS50-202ENST00000305866 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
VPS50-202ENST00000305866 A8MWP4 228 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 Q75L30 129 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 ATRQ13535 2644 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 NBEAL1Q6ZS30 2694 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 CD164Q04900 197 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 DEFB105AQ8NG35 78 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 NOTCH2Q04721 2471 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
VPS50-202ENST00000305866 A8MUN3 132 aa3.25□□□□□ -1.89
VPS50-202ENST00000305866 C1orf195Q5TG92 126 aa3.25□□□□□ -1.89
VPS50-202ENST00000305866 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
VPS50-202ENST00000305866 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
VPS50-202ENST00000305866 NDUFB1O75438 58 aa3.25□□□□□ -1.89
VPS50-202ENST00000305866 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
VPS50-202ENST00000305866 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
VPS50-202ENST00000305866 A0A087X002 238 aa3.24□□□□□ -1.89
VPS50-202ENST00000305866 NOTCH2NLQ7Z3S9 236 aa3.24□□□□□ -1.89
VPS50-202ENST00000305866 PRLHP81277 87 aa3.22□□□□□ -1.89
VPS50-202ENST00000305866 PHF5AQ7RTV0 110 aaKnown RBP3.22□□□□□ -1.89
VPS50-202ENST00000305866 WWC2-AS2Q96NR7 200 aa3.22□□□□□ -1.89
VPS50-202ENST00000305866 MOBPQ13875 183 aa3.22□□□□□ -1.89
VPS50-202ENST00000305866 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
VPS50-202ENST00000305866 A0A087WSZ3 146 aa3.21□□□□□ -1.89
VPS50-202ENST00000305866 PSPHP1O15172 72 aa3.21□□□□□ -1.89
VPS50-202ENST00000305866 UBE2BP63146 152 aa3.21□□□□□ -1.89
VPS50-202ENST00000305866 IGLV5-52A0A0A0MRZ9 124 aa3.21□□□□□ -1.9
VPS50-202ENST00000305866 TP53AIP1Q9HCN2 124 aa3.21□□□□□ -1.9
VPS50-202ENST00000305866 SEC61GP60059 68 aa3.21□□□□□ -1.9
VPS50-202ENST00000305866 HRES1P13985 223 aa3.2□□□□□ -1.9
VPS50-202ENST00000305866 ZNF706Q9Y5V0 76 aaPredicted RBP3.2□□□□□ -1.9
VPS50-202ENST00000305866 A0A087WTM6 91 aa3.2□□□□□ -1.9
VPS50-202ENST00000305866 H0Y9P7 68 aa3.2□□□□□ -1.9
VPS50-202ENST00000305866 UBE2AP49459 152 aa3.2□□□□□ -1.9
VPS50-202ENST00000305866 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
VPS50-202ENST00000305866 Q5W150 140 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms