RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GOLGB1Q14789 3259 aaKnown RBP2.6□□□□□ -1.99
SCN3A-201ENST00000283254 A0A1B0GU33 70 aa2.59□□□□□ -1.99
SCN3A-201ENST00000283254 LCA10Q71F78 164 aa2.59□□□□□ -1.99
SCN3A-201ENST00000283254 A0A1W2PNM2 257 aa2.59□□□□□ -2
SCN3A-201ENST00000283254 H7BZZ5 65 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 TNP2Q05952 138 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 PRR26Q8N8Z3 221 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 KALRNO60229 2985 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
SCN3A-201ENST00000283254 A0A1W2PNN7 141 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 A0A0A0MQY5 61 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 ANAPC11Q9NYG5 84 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 PLAC8Q9NZF1 115 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 R4GN34 69 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 KRTAP17-1Q9BYP8 105 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 DMAC1Q96GE9 116 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 KRTAP1-1Q07627 177 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 S4R3F8 94 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
SCN3A-201ENST00000283254 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 TNRC18O15417 2968 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 FP248Q71RG6 208 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 HTTP42858 3142 aa2.55□□□□□ -2
SCN3A-201ENST00000283254 H3BS24 57 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 KRTAP10-3P60369 221 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 OCR1Q9BZK8 76 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 LCE6AA0A183 80 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 NF1P21359 2839 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 SPRR1BP22528 89 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 Q5VSD8 79 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 TENM2Q9NT68 2774 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 EIF4EBP3O60516 100 aaPredicted RBP2.53□□□□□ -2
SCN3A-201ENST00000283254 Q75L30 129 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 A0A0G2JQZ4 141 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 KRTAP1-3Q8IUG1 177 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 OXTP01178 125 aa2.52□□□□□ -2.01
SCN3A-201ENST00000283254 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
SCN3A-201ENST00000283254 MMP24-AS1A0A0U1RRL7 71 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 SPRR1AP35321 89 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 SPINK7P58062 85 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 CHD7Q9P2D1 2997 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
SCN3A-201ENST00000283254 UTRNP46939 3433 aa2.5□□□□□ -2.01
SCN3A-201ENST00000283254 Q5W150 140 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
SCN3A-201ENST00000283254 M0QZ58 72 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 APCP25054 2843 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 PCNTO95613 3336 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 CEP350Q5VT06 3117 aa2.48□□□□□ -2.01
SCN3A-201ENST00000283254 LINC00472Q9H8W2 130 aa2.48□□□□□ -2.01
SCN3A-201ENST00000283254 DNAH12Q6ZR08 3092 aa2.47□□□□□ -2.01
SCN3A-201ENST00000283254 Q8N9P0 234 aaPredicted RBP2.47□□□□□ -2.01
SCN3A-201ENST00000283254 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
SCN3A-201ENST00000283254 PANO1I0J062 215 aa2.47□□□□□ -2.01
SCN3A-201ENST00000283254 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
SCN3A-201ENST00000283254 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
SCN3A-201ENST00000283254 ROMO1P60602 79 aa2.45□□□□□ -2.02
SCN3A-201ENST00000283254 RANBP2P49792 3224 aaKnown RBP2.45□□□□□ -2.02
SCN3A-201ENST00000283254 Q6ZR54 194 aa2.44□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP1-5Q9BYS1 174 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
SCN3A-201ENST00000283254 A0A0C4DFX4 3053 aa2.4□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP10-2P60368 255 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP21-3Q3LHN1 58 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 Q5VV11 94 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 TRIOO75962 3097 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 Q5XG85 94 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 MXRA5Q9NR99 2828 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 PKD1L1Q8TDX9 2849 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
SCN3A-201ENST00000283254 Q8NDZ9 215 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 PDZD2O15018 2839 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 BRCA2P51587 3418 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 ZANQ9Y493 2812 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 REV3LO60673 3130 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 VWFP04275 2813 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-201ENST00000283254 TNP1P09430 55 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 A8MUU9 505 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 MGAQ8IWI9 3026 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.04
SCN3A-201ENST00000283254 A0A087X002 238 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 FRYQ5TBA9 3013 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 Q6ZRN7 208 aaPredicted RBP2.32□□□□□ -2.04
SCN3A-201ENST00000283254 DCHS2Q6V1P9 2916 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 NOTCH2NLQ7Z3S9 236 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 MKI67P46013 3256 aaKnown RBP2.31□□□□□ -2.04
SCN3A-201ENST00000283254 TACC2O95359 2948 aa2.31□□□□□ -2.04
SCN3A-201ENST00000283254 TGP01266 2768 aa2.31□□□□□ -2.04
SCN3A-201ENST00000283254 SPTBN5Q9NRC6 3674 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms