RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GOLGB1Q14789 3259 aaKnown RBP2.6□□□□□ -1.99
SCN3A-201ENST00000283254 A0A1B0GU33 70 aa2.59□□□□□ -1.99
SCN3A-201ENST00000283254 LCA10Q71F78 164 aa2.59□□□□□ -1.99
SCN3A-201ENST00000283254 A0A1W2PNM2 257 aa2.59□□□□□ -2
SCN3A-201ENST00000283254 H7BZZ5 65 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 TNP2Q05952 138 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 PRR26Q8N8Z3 221 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 KALRNO60229 2985 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
SCN3A-201ENST00000283254 A0A1W2PNN7 141 aa2.58□□□□□ -2
SCN3A-201ENST00000283254 A0A0A0MQY5 61 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 ANAPC11Q9NYG5 84 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 PLAC8Q9NZF1 115 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 R4GN34 69 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 KRTAP17-1Q9BYP8 105 aa2.57□□□□□ -2
SCN3A-201ENST00000283254 DMAC1Q96GE9 116 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 KRTAP1-1Q07627 177 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 S4R3F8 94 aa2.56□□□□□ -2
SCN3A-201ENST00000283254 TENM1Q9UKZ4 2725 aa2.55□□□□□ -2
SCN3A-201ENST00000283254 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 TNRC18O15417 2968 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 FP248Q71RG6 208 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.55□□□□□ -2
SCN3A-201ENST00000283254 HTTP42858 3142 aa2.55□□□□□ -2
SCN3A-201ENST00000283254 H3BS24 57 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 KRTAP10-3P60369 221 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 OCR1Q9BZK8 76 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 LCE6AA0A183 80 aa2.54□□□□□ -2
SCN3A-201ENST00000283254 NF1P21359 2839 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 SPRR1BP22528 89 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 Q5VSD8 79 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 TENM2Q9NT68 2774 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 EIF4EBP3O60516 100 aaPredicted RBP2.53□□□□□ -2
SCN3A-201ENST00000283254 Q75L30 129 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 A0A0G2JQZ4 141 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 KRTAP1-3Q8IUG1 177 aa2.53□□□□□ -2
SCN3A-201ENST00000283254 OXTP01178 125 aa2.52□□□□□ -2.01
SCN3A-201ENST00000283254 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
SCN3A-201ENST00000283254 MMP24-AS1A0A0U1RRL7 71 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 SPRR1AP35321 89 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 SPINK7P58062 85 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 CHD7Q9P2D1 2997 aa2.51□□□□□ -2.01
SCN3A-201ENST00000283254 LINC01558Q9Y6Z2 57 aa2.5□□□□□ -2.01
SCN3A-201ENST00000283254 UTRNP46939 3433 aa2.5□□□□□ -2.01
SCN3A-201ENST00000283254 Q5W150 140 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
SCN3A-201ENST00000283254 M0QZ58 72 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 APCP25054 2843 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 PCNTO95613 3336 aa2.49□□□□□ -2.01
SCN3A-201ENST00000283254 CEP350Q5VT06 3117 aa2.48□□□□□ -2.01
SCN3A-201ENST00000283254 LINC00472Q9H8W2 130 aa2.48□□□□□ -2.01
SCN3A-201ENST00000283254 DNAH12Q6ZR08 3092 aa2.47□□□□□ -2.01
SCN3A-201ENST00000283254 Q8N9P0 234 aaPredicted RBP2.47□□□□□ -2.01
SCN3A-201ENST00000283254 RPS29P62273 56 aaKnown RBP2.47□□□□□ -2.01
SCN3A-201ENST00000283254 PANO1I0J062 215 aa2.47□□□□□ -2.01
SCN3A-201ENST00000283254 SRRM2Q9UQ35 2752 aaKnown RBP2.46□□□□□ -2.02
SCN3A-201ENST00000283254 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
SCN3A-201ENST00000283254 ROMO1P60602 79 aa2.45□□□□□ -2.02
SCN3A-201ENST00000283254 RANBP2P49792 3224 aaKnown RBP2.45□□□□□ -2.02
SCN3A-201ENST00000283254 Q6ZR54 194 aa2.44□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP1-5Q9BYS1 174 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP10-1P60331 282 aa2.42□□□□□ -2.02
SCN3A-201ENST00000283254 A0A0C4DFX4 3053 aa2.4□□□□□ -2.02
SCN3A-201ENST00000283254 KRTAP10-2P60368 255 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP21-3Q3LHN1 58 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 Q5VV11 94 aa2.4□□□□□ -2.03
SCN3A-201ENST00000283254 TRIOO75962 3097 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 ADM2Q7Z4H4 148 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 Q5XG85 94 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
SCN3A-201ENST00000283254 MXRA5Q9NR99 2828 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 PKD1L1Q8TDX9 2849 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP4-16G5E9R7 235 aaPredicted RBP2.36□□□□□ -2.03
SCN3A-201ENST00000283254 Q8NDZ9 215 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 PDZD2O15018 2839 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 BRCA2P51587 3418 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 ZANQ9Y493 2812 aa2.36□□□□□ -2.03
SCN3A-201ENST00000283254 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 REV3LO60673 3130 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 VWFP04275 2813 aa2.35□□□□□ -2.03
SCN3A-201ENST00000283254 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-201ENST00000283254 TNP1P09430 55 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 A8MUU9 505 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 MGAQ8IWI9 3026 aa2.34□□□□□ -2.03
SCN3A-201ENST00000283254 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.04
SCN3A-201ENST00000283254 A0A087X002 238 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 FRYQ5TBA9 3013 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
SCN3A-201ENST00000283254 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 Q6ZRN7 208 aaPredicted RBP2.32□□□□□ -2.04
SCN3A-201ENST00000283254 DCHS2Q6V1P9 2916 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 NOTCH2NLQ7Z3S9 236 aa2.32□□□□□ -2.04
SCN3A-201ENST00000283254 MKI67P46013 3256 aaKnown RBP2.31□□□□□ -2.04
SCN3A-201ENST00000283254 TACC2O95359 2948 aa2.31□□□□□ -2.04
SCN3A-201ENST00000283254 TGP01266 2768 aa2.31□□□□□ -2.04
SCN3A-201ENST00000283254 SPTBN5Q9NRC6 3674 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms