RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 C7orf65Q6ZTY9 151 aa13.94□□□□□ -0.18
USP12-201ENST00000282344 C9orf163Q8N9P6 203 aa13.94□□□□□ -0.18
USP12-201ENST00000282344 LINC00313P59037 77 aa13.94□□□□□ -0.18
USP12-201ENST00000282344 OCR1Q9BZK8 76 aa13.93□□□□□ -0.18
USP12-201ENST00000282344 BAHCC1Q9P281 2608 aa13.92□□□□□ -0.18
USP12-201ENST00000282344 ANAPC11Q9NYG5 84 aa13.92□□□□□ -0.18
USP12-201ENST00000282344 C8orf17Q9NRJ1 99 aa13.91□□□□□ -0.18
USP12-201ENST00000282344 ITPR2Q14571 2701 aa13.9□□□□□ -0.18
USP12-201ENST00000282344 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
USP12-201ENST00000282344 LOC101927531A0A1B0GV80 90 aa13.88□□□□□ -0.19
USP12-201ENST00000282344 IGLV8-61A0A075B6I0 122 aa13.85□□□□□ -0.19
USP12-201ENST00000282344 DSCR10P59022 87 aa13.84□□□□□ -0.19
USP12-201ENST00000282344 STAB2Q8WWQ8 2551 aa13.83□□□□□ -0.2
USP12-201ENST00000282344 A0A1B0GVX0 72 aa13.82□□□□□ -0.2
USP12-201ENST00000282344 IGLV5-37A0A075B6J1 123 aa13.81□□□□□ -0.2
USP12-201ENST00000282344 ATP11AUNQ6ZP68 121 aa13.8□□□□□ -0.2
USP12-201ENST00000282344 ZNF861PO60384 105 aa13.8□□□□□ -0.2
USP12-201ENST00000282344 CNBPP62633 177 aaKnown RBP13.8□□□□□ -0.2
USP12-201ENST00000282344 FAM229AH3BQW9 127 aa13.79□□□□□ -0.2
USP12-201ENST00000282344 TYMSOSQ8TAI1 123 aa13.78□□□□□ -0.2
USP12-201ENST00000282344 SPRR4Q96PI1 79 aa13.78□□□□□ -0.2
USP12-201ENST00000282344 CYP4F30PQ9H0H9 118 aa13.78□□□□□ -0.2
USP12-201ENST00000282344 A0A087WTM6 91 aa13.76□□□□□ -0.21
USP12-201ENST00000282344 NF1P21359 2839 aa13.76□□□□□ -0.21
USP12-201ENST00000282344 HIVEP1P15822 2718 aa13.75□□□□□ -0.21
USP12-201ENST00000282344 PSORS1C2Q9UIG4 136 aa13.74□□□□□ -0.21
USP12-201ENST00000282344 C8orf87E5RJ46 101 aa13.73□□□□□ -0.21
USP12-201ENST00000282344 WDFY3Q8IZQ1 3526 aa13.73□□□□□ -0.21
USP12-201ENST00000282344 Q96NJ1 140 aa13.73□□□□□ -0.21
USP12-201ENST00000282344 TNRC18O15417 2968 aaPredicted RBP13.72□□□□□ -0.21
USP12-201ENST00000282344 APLNQ9ULZ1 77 aa13.7□□□□□ -0.22
USP12-201ENST00000282344 FBN2P35556 2912 aa13.69□□□□□ -0.22
USP12-201ENST00000282344 PLA2G1BP04054 148 aaKnown RBP13.69□□□□□ -0.22
USP12-201ENST00000282344 Q5XG85 94 aa13.67□□□□□ -0.22
USP12-201ENST00000282344 APCP25054 2843 aa13.67□□□□□ -0.22
USP12-201ENST00000282344 HRNRQ86YZ3 2850 aaPredicted RBP13.67□□□□□ -0.22
USP12-201ENST00000282344 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
USP12-201ENST00000282344 SSBP3-AS1Q7Z2R9 100 aa13.66□□□□□ -0.22
USP12-201ENST00000282344 WIPF1O43516 503 aa13.66□□□□□ -0.22
USP12-201ENST00000282344 SPANXA2-OT1Q8N9U9 137 aa13.65□□□□□ -0.22
USP12-201ENST00000282344 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
USP12-201ENST00000282344 FP248Q71RG6 208 aaPredicted RBP13.63□□□□□ -0.23
USP12-201ENST00000282344 SPRR1AP35321 89 aa13.63□□□□□ -0.23
USP12-201ENST00000282344 FAM229BQ4G0N7 80 aa13.62□□□□□ -0.23
USP12-201ENST00000282344 OXTP01178 125 aa13.61□□□□□ -0.23
USP12-201ENST00000282344 DCHS1Q96JQ0 3298 aa13.59□□□□□ -0.23
USP12-201ENST00000282344 IGLV7-43P04211 117 aa13.58□□□□□ -0.24
USP12-201ENST00000282344 KRTAP26-1Q6PEX3 210 aa13.58□□□□□ -0.24
USP12-201ENST00000282344 CRYBG3Q68DQ2 2970 aa13.57□□□□□ -0.24
USP12-201ENST00000282344 UQCR11O14957 56 aa13.56□□□□□ -0.24
USP12-201ENST00000282344 PRR26Q8N8Z3 221 aa13.56□□□□□ -0.24
USP12-201ENST00000282344 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.54□□□□□ -0.24
USP12-201ENST00000282344 Q1T7F1 81 aa13.53□□□□□ -0.24
USP12-201ENST00000282344 WWC2-AS2Q96NR7 200 aa13.5□□□□□ -0.25
USP12-201ENST00000282344 MIR22HGQ0VDD5 57 aa13.45□□□□□ -0.26
USP12-201ENST00000282344 KRTAP1-5Q9BYS1 174 aa13.44□□□□□ -0.26
USP12-201ENST00000282344 KMT2BQ9UMN6 2715 aaPredicted RBP13.44□□□□□ -0.26
USP12-201ENST00000282344 MMP24-AS1A0A0U1RRL7 71 aa13.43□□□□□ -0.26
USP12-201ENST00000282344 RELNP78509 3460 aa13.43□□□□□ -0.26
USP12-201ENST00000282344 ASPMQ8IZT6 3477 aa13.42□□□□□ -0.26
USP12-201ENST00000282344 IGLV7-46A0A075B6I9 117 aa13.42□□□□□ -0.26
USP12-201ENST00000282344 SMR3BP02814 79 aaPredicted RBP13.4□□□□□ -0.26
USP12-201ENST00000282344 KTN1-AS1Q86SY8 53 aa13.4□□□□□ -0.26
USP12-201ENST00000282344 C9orf92A6NGG3 77 aa13.4□□□□□ -0.27
USP12-201ENST00000282344 LINC00304Q8N9R0 145 aa13.4□□□□□ -0.27
USP12-201ENST00000282344 LINC00472Q9H8W2 130 aa13.37□□□□□ -0.27
USP12-201ENST00000282344 Q8N9P0 234 aaPredicted RBP13.37□□□□□ -0.27
USP12-201ENST00000282344 CD164Q04900 197 aa13.37□□□□□ -0.27
USP12-201ENST00000282344 CDC42SE1Q9NRR8 79 aa13.37□□□□□ -0.27
USP12-201ENST00000282344 TNP2Q05952 138 aa13.36□□□□□ -0.27
USP12-201ENST00000282344 Q8N1X5 172 aa13.35□□□□□ -0.27
USP12-201ENST00000282344 MXRA5Q9NR99 2828 aa13.35□□□□□ -0.27
USP12-201ENST00000282344 SPRR1BP22528 89 aa13.31□□□□□ -0.28
USP12-201ENST00000282344 FLG2Q5D862 2391 aaPredicted RBP13.3□□□□□ -0.28
USP12-201ENST00000282344 KRTAP4-16G5E9R7 235 aaPredicted RBP13.3□□□□□ -0.28
USP12-201ENST00000282344 ZFHX4Q86UP3 3567 aa13.29□□□□□ -0.28
USP12-201ENST00000282344 MUC3AQ02505 3323 aa13.27□□□□□ -0.29
USP12-201ENST00000282344 LAMA5O15230 3695 aa13.27□□□□□ -0.29
USP12-201ENST00000282344 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
USP12-201ENST00000282344 HRES1P13985 223 aa13.27□□□□□ -0.29
USP12-201ENST00000282344 Q5VV11 94 aa13.21□□□□□ -0.3
USP12-201ENST00000282344 Q75L30 129 aa13.21□□□□□ -0.3
USP12-201ENST00000282344 LCA10Q71F78 164 aa13.19□□□□□ -0.3
USP12-201ENST00000282344 PLAC8Q9NZF1 115 aa13.16□□□□□ -0.3
USP12-201ENST00000282344 LINC01558Q9Y6Z2 57 aa13.16□□□□□ -0.3
USP12-201ENST00000282344 PANO1I0J062 215 aa13.13□□□□□ -0.31
USP12-201ENST00000282344 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
USP12-201ENST00000282344 KRTAP29-1A8MX34 341 aaPredicted RBP13.07□□□□□ -0.32
USP12-201ENST00000282344 CELSR1Q9NYQ6 3014 aa13.06□□□□□ -0.32
USP12-201ENST00000282344 DMDP11532 3685 aa13.05□□□□□ -0.32
USP12-201ENST00000282344 SPINK7P58062 85 aa13.05□□□□□ -0.32
USP12-201ENST00000282344 ZCCHC13Q8WW36 166 aaKnown RBP13.05□□□□□ -0.32
USP12-201ENST00000282344 SPINT4Q6UDR6 99 aa13.05□□□□□ -0.32
USP12-201ENST00000282344 Q5W150 140 aa13.04□□□□□ -0.32
USP12-201ENST00000282344 KRTAP7-1Q8IUC3 87 aa13.02□□□□□ -0.32
USP12-201ENST00000282344 RBM12B-AS1Q9P1G2 102 aa13.01□□□□□ -0.33
USP12-201ENST00000282344 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
USP12-201ENST00000282344 A0A0D9SG42 100 aa12.98□□□□□ -0.33
USP12-201ENST00000282344 CSMD1Q96PZ7 3565 aa12.96□□□□□ -0.34
USP12-201ENST00000282344 PRAC1Q96KF2 57 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms