RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
TNFSF4-201ENST00000281834 SNURFQ9Y675 71 aa3.79□□□□□ -1.8
TNFSF4-201ENST00000281834 A0A087WSZ3 146 aa3.79□□□□□ -1.8
TNFSF4-201ENST00000281834 A0A087WTM6 91 aa3.78□□□□□ -1.8
TNFSF4-201ENST00000281834 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
TNFSF4-201ENST00000281834 RTL8CO15255 209 aa3.78□□□□□ -1.8
TNFSF4-201ENST00000281834 Q6ZRN7 208 aaPredicted RBP3.78□□□□□ -1.8
TNFSF4-201ENST00000281834 ANAPC11Q9NYG5 84 aa3.78□□□□□ -1.8
TNFSF4-201ENST00000281834 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
TNFSF4-201ENST00000281834 IGLV5-52A0A0A0MRZ9 124 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 C1orf134Q5TEV5 83 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 IGFL1Q6UW32 110 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 Q8NBF4 154 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 SMIM29Q86T20 159 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 CXCL6P80162 114 aa3.76□□□□□ -1.81
TNFSF4-201ENST00000281834 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 TNP2Q05952 138 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 PRR4Q16378 134 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 WFDC13Q8IUB5 93 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 FAM30AQ9NZY2 134 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
TNFSF4-201ENST00000281834 DNAH2Q9P225 4427 aa3.74□□□□□ -1.81
TNFSF4-201ENST00000281834 K7EQZ3 153 aa3.74□□□□□ -1.81
TNFSF4-201ENST00000281834 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
TNFSF4-201ENST00000281834 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
TNFSF4-201ENST00000281834 BCE1O60756 84 aa3.73□□□□□ -1.81
TNFSF4-201ENST00000281834 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
TNFSF4-201ENST00000281834 PSORS1C2Q9UIG4 136 aa3.73□□□□□ -1.81
TNFSF4-201ENST00000281834 CRYGAP11844 174 aa3.72□□□□□ -1.81
TNFSF4-201ENST00000281834 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 H0Y9J4 135 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 KRTAP10-2P60368 255 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 Q6ZR54 194 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 DNAH11Q96DT5 4516 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 DSCR10P59022 87 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 MOBPQ13875 183 aa3.71□□□□□ -1.82
TNFSF4-201ENST00000281834 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
TNFSF4-201ENST00000281834 DNAH6Q9C0G6 4158 aa3.7□□□□□ -1.82
TNFSF4-201ENST00000281834 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
TNFSF4-201ENST00000281834 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
TNFSF4-201ENST00000281834 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
TNFSF4-201ENST00000281834 WWC2-AS2Q96NR7 200 aa3.69□□□□□ -1.82
TNFSF4-201ENST00000281834 TMEM254Q8TBM7 123 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 V9GYY9 64 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 C1orf195Q5TG92 126 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 CIRBP-AS1Q8TBR5 109 aa3.68□□□□□ -1.82
TNFSF4-201ENST00000281834 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
TNFSF4-201ENST00000281834 HCG22E2RYF7 251 aa3.67□□□□□ -1.82
TNFSF4-201ENST00000281834 TMEM258P61165 79 aa3.67□□□□□ -1.82
TNFSF4-201ENST00000281834 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
TNFSF4-201ENST00000281834 ZNF861PO60384 105 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 H7BZZ5 65 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 PSPHP1O15172 72 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 KRTAP13-1Q8IUC0 172 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 DNAH8Q96JB1 4490 aa3.66□□□□□ -1.82
TNFSF4-201ENST00000281834 PLAC8Q9NZF1 115 aa3.65□□□□□ -1.82
TNFSF4-201ENST00000281834 NDUFS5O43920 106 aa3.65□□□□□ -1.83
TNFSF4-201ENST00000281834 OXTP01178 125 aa3.65□□□□□ -1.83
TNFSF4-201ENST00000281834 SEC61GP60059 68 aa3.65□□□□□ -1.83
TNFSF4-201ENST00000281834 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
TNFSF4-201ENST00000281834 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 IGLV8-61A0A075B6I0 122 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 SPRR1BP22528 89 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 CASC2Q6XLA1 102 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 LRP1BQ9NZR2 4599 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 A0A1B0GW54 56 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 IGLV7-43P04211 117 aa3.64□□□□□ -1.83
TNFSF4-201ENST00000281834 CDK2AP2O75956 126 aa3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 ZNF706Q9Y5V0 76 aaPredicted RBP3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 NDUFB1O75438 58 aa3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 LINC00208Q96KT6 92 aa3.63□□□□□ -1.83
TNFSF4-201ENST00000281834 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
TNFSF4-201ENST00000281834 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
TNFSF4-201ENST00000281834 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
TNFSF4-201ENST00000281834 A8MWP4 228 aa3.61□□□□□ -1.83
TNFSF4-201ENST00000281834 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
TNFSF4-201ENST00000281834 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
TNFSF4-201ENST00000281834 MP68P56378 58 aa3.6□□□□□ -1.83
TNFSF4-201ENST00000281834 A0A087X002 238 aa3.6□□□□□ -1.83
TNFSF4-201ENST00000281834 hDV103S1A0JD37 113 aa3.6□□□□□ -1.83
TNFSF4-201ENST00000281834 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
TNFSF4-201ENST00000281834 H0Y9P7 68 aa3.59□□□□□ -1.83
TNFSF4-201ENST00000281834 RETNLBQ9BQ08 111 aa3.59□□□□□ -1.83
TNFSF4-201ENST00000281834 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 PCOTHQ58A44 107 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 FAT1Q14517 4588 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 Q5XG85 94 aa3.58□□□□□ -1.84
TNFSF4-201ENST00000281834 NDUFC1O43677 76 aa3.57□□□□□ -1.84
TNFSF4-201ENST00000281834 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
TNFSF4-201ENST00000281834 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms