RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
SCAMP2-201ENST00000268099 CHKB-CPT1BH3BT56 60 aa9.74□□□□□ -0.85
SCAMP2-201ENST00000268099 H3BPC8 53 aa9.73□□□□□ -0.85
SCAMP2-201ENST00000268099 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
SCAMP2-201ENST00000268099 CASC10Q5T4H9 136 aa9.72□□□□□ -0.85
SCAMP2-201ENST00000268099 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
SCAMP2-201ENST00000268099 PRR15LQ9BU68 103 aa9.71□□□□□ -0.85
SCAMP2-201ENST00000268099 TEP1Q99973 2627 aaKnown RBP9.71□□□□□ -0.86
SCAMP2-201ENST00000268099 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
SCAMP2-201ENST00000268099 F8P00451 2351 aa9.7□□□□□ -0.86
SCAMP2-201ENST00000268099 CD164Q04900 197 aa9.7□□□□□ -0.86
SCAMP2-201ENST00000268099 C16orf90A8MZG2 172 aa9.7□□□□□ -0.86
SCAMP2-201ENST00000268099 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
SCAMP2-201ENST00000268099 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
SCAMP2-201ENST00000268099 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
SCAMP2-201ENST00000268099 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
SCAMP2-201ENST00000268099 C9orf163Q8N9P6 203 aa9.67□□□□□ -0.86
SCAMP2-201ENST00000268099 PRLHP81277 87 aa9.67□□□□□ -0.86
SCAMP2-201ENST00000268099 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.86
SCAMP2-201ENST00000268099 A8MWP4 228 aa9.63□□□□□ -0.87
SCAMP2-201ENST00000268099 Q75L30 129 aa9.63□□□□□ -0.87
SCAMP2-201ENST00000268099 ATRQ13535 2644 aa9.63□□□□□ -0.87
SCAMP2-201ENST00000268099 KTN1-AS1Q86SY8 53 aa9.63□□□□□ -0.87
SCAMP2-201ENST00000268099 COA5Q86WW8 74 aa9.62□□□□□ -0.87
SCAMP2-201ENST00000268099 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
SCAMP2-201ENST00000268099 TENM3Q9P273 2699 aa9.62□□□□□ -0.87
SCAMP2-201ENST00000268099 LCA10Q71F78 164 aa9.62□□□□□ -0.87
SCAMP2-201ENST00000268099 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
SCAMP2-201ENST00000268099 LOC101927531A0A1B0GV80 90 aa9.61□□□□□ -0.87
SCAMP2-201ENST00000268099 ATP11AUNQ6ZP68 121 aa9.6□□□□□ -0.87
SCAMP2-201ENST00000268099 LINC00472Q9H8W2 130 aa9.6□□□□□ -0.87
SCAMP2-201ENST00000268099 A6NED7 52 aa9.6□□□□□ -0.87
SCAMP2-201ENST00000268099 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
SCAMP2-201ENST00000268099 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
SCAMP2-201ENST00000268099 INAFM1C9JVW0 142 aa9.58□□□□□ -0.88
SCAMP2-201ENST00000268099 KRTAP10-11P60412 298 aa9.57□□□□□ -0.88
SCAMP2-201ENST00000268099 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
SCAMP2-201ENST00000268099 A0A096LNI7 61 aa9.55□□□□□ -0.88
SCAMP2-201ENST00000268099 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
SCAMP2-201ENST00000268099 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
SCAMP2-201ENST00000268099 H0Y9J4 135 aa9.54□□□□□ -0.88
SCAMP2-201ENST00000268099 A6NN06 94 aa9.53□□□□□ -0.88
SCAMP2-201ENST00000268099 RBM12B-AS1Q9P1G2 102 aa9.53□□□□□ -0.88
SCAMP2-201ENST00000268099 SPRR1BP22528 89 aa9.53□□□□□ -0.88
SCAMP2-201ENST00000268099 CDC42SE1Q9NRR8 79 aa9.53□□□□□ -0.88
SCAMP2-201ENST00000268099 PCOTHQ58A44 107 aa9.51□□□□□ -0.89
SCAMP2-201ENST00000268099 NDUFS5O43920 106 aa9.51□□□□□ -0.89
SCAMP2-201ENST00000268099 ANK2Q01484 3957 aa9.5□□□□□ -0.89
SCAMP2-201ENST00000268099 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
SCAMP2-201ENST00000268099 LINC01558Q9Y6Z2 57 aa9.49□□□□□ -0.89
SCAMP2-201ENST00000268099 SRRM2Q9UQ35 2752 aaKnown RBP9.49□□□□□ -0.89
SCAMP2-201ENST00000268099 SPAG11AQ6PDA7 123 aa9.48□□□□□ -0.89
SCAMP2-201ENST00000268099 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
SCAMP2-201ENST00000268099 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
SCAMP2-201ENST00000268099 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
SCAMP2-201ENST00000268099 TENM2Q9NT68 2774 aa9.45□□□□□ -0.9
SCAMP2-201ENST00000268099 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
SCAMP2-201ENST00000268099 MOBPQ13875 183 aa9.43□□□□□ -0.9
SCAMP2-201ENST00000268099 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
SCAMP2-201ENST00000268099 Q6ZR54 194 aa9.42□□□□□ -0.9
SCAMP2-201ENST00000268099 C7orf65Q6ZTY9 151 aa9.41□□□□□ -0.9
SCAMP2-201ENST00000268099 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
SCAMP2-201ENST00000268099 Q96NJ1 140 aa9.4□□□□□ -0.9
SCAMP2-201ENST00000268099 HRES1P13985 223 aa9.39□□□□□ -0.91
SCAMP2-201ENST00000268099 SPINK7P58062 85 aa9.39□□□□□ -0.91
SCAMP2-201ENST00000268099 DNAH10Q8IVF4 4471 aa9.38□□□□□ -0.91
SCAMP2-201ENST00000268099 C8orf17Q9NRJ1 99 aa9.38□□□□□ -0.91
SCAMP2-201ENST00000268099 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
SCAMP2-201ENST00000268099 COL6A5A8TX70 2615 aa9.33□□□□□ -0.92
SCAMP2-201ENST00000268099 IGHV6-1A0A0B4J1U7 121 aa9.32□□□□□ -0.92
SCAMP2-201ENST00000268099 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
SCAMP2-201ENST00000268099 IGLV9-49A0A0B4J1Y8 123 aa9.31□□□□□ -0.92
SCAMP2-201ENST00000268099 A0A1B0GVX0 72 aa9.31□□□□□ -0.92
SCAMP2-201ENST00000268099 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
SCAMP2-201ENST00000268099 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
SCAMP2-201ENST00000268099 MRPL34Q9BQ48 92 aaKnown RBP9.29□□□□□ -0.92
SCAMP2-201ENST00000268099 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
SCAMP2-201ENST00000268099 LYSTQ99698 3801 aa9.26□□□□□ -0.93
SCAMP2-201ENST00000268099 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
SCAMP2-201ENST00000268099 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
SCAMP2-201ENST00000268099 DNAH9Q9NYC9 4486 aa9.25□□□□□ -0.93
SCAMP2-201ENST00000268099 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
SCAMP2-201ENST00000268099 DNAH3Q8TD57 4116 aa9.23□□□□□ -0.93
SCAMP2-201ENST00000268099 A0A087X002 238 aa9.23□□□□□ -0.93
SCAMP2-201ENST00000268099 NOTCH2NLQ7Z3S9 236 aa9.23□□□□□ -0.93
SCAMP2-201ENST00000268099 NOTCH1P46531 2555 aa9.22□□□□□ -0.93
SCAMP2-201ENST00000268099 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
SCAMP2-201ENST00000268099 PANO1I0J062 215 aa9.21□□□□□ -0.93
SCAMP2-201ENST00000268099 K7EIL1 84 aa9.21□□□□□ -0.93
SCAMP2-201ENST00000268099 MDFIQ99750 246 aa9.21□□□□□ -0.94
SCAMP2-201ENST00000268099 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
SCAMP2-201ENST00000268099 NBEAL1Q6ZS30 2694 aa9.19□□□□□ -0.94
SCAMP2-201ENST00000268099 LINC00313P59037 77 aa9.19□□□□□ -0.94
SCAMP2-201ENST00000268099 COL7A1Q02388 2944 aa9.18□□□□□ -0.94
SCAMP2-201ENST00000268099 HUWE1Q7Z6Z7 4374 aaKnown RBP9.18□□□□□ -0.94
SCAMP2-201ENST00000268099 Q5W150 140 aa9.17□□□□□ -0.94
SCAMP2-201ENST00000268099 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
SCAMP2-201ENST00000268099 ACYP2P14621 99 aa9.15□□□□□ -0.94
SCAMP2-201ENST00000268099 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
SCAMP2-201ENST00000268099 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms