RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 C15orf56Q8N910 161 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 K7EIL1 84 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 OBSCN-AS1Q96MR7 158 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
VPS13C-202ENST00000261517 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 SMIM29Q86T20 159 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 KRTAP1-3Q8IUG1 177 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 IGLV5-48A0A075B6I7 105 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 A0A087WTM6 91 aa2.85□□□□□ -1.95
VPS13C-202ENST00000261517 GIG44P09565 113 aaPredicted RBP2.85□□□□□ -1.95
VPS13C-202ENST00000261517 SMCPP49901 116 aaPredicted RBP2.85□□□□□ -1.95
VPS13C-202ENST00000261517 FAM104AQ969W3 186 aa2.84□□□□□ -1.95
VPS13C-202ENST00000261517 ZFHX3Q15911 3703 aa2.84□□□□□ -1.95
VPS13C-202ENST00000261517 FAM218AQ96MZ4 157 aa2.84□□□□□ -1.95
VPS13C-202ENST00000261517 PSORS1C2Q9UIG4 136 aa2.84□□□□□ -1.95
VPS13C-202ENST00000261517 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.96
VPS13C-202ENST00000261517 APLNQ9ULZ1 77 aa2.83□□□□□ -1.96
VPS13C-202ENST00000261517 FBN1P35555 2871 aaKnown RBP2.83□□□□□ -1.96
VPS13C-202ENST00000261517 KRTAP1-1Q07627 177 aa2.83□□□□□ -1.96
VPS13C-202ENST00000261517 PHF5AQ7RTV0 110 aaKnown RBP2.83□□□□□ -1.96
VPS13C-202ENST00000261517 SPRR4Q96PI1 79 aa2.83□□□□□ -1.96
VPS13C-202ENST00000261517 PDZD2O15018 2839 aa2.83□□□□□ -1.96
VPS13C-202ENST00000261517 SPENQ96T58 3664 aaKnown RBP2.82□□□□□ -1.96
VPS13C-202ENST00000261517 PRB2P02812 416 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-202ENST00000261517 IGLV7-43P04211 117 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 C8orf17Q9NRJ1 99 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 A0A087WVE0 104 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 KRTAP10-11P60412 298 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 IGKV2D-30A0A075B6S6 120 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 IGKV2-30P06310 120 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
VPS13C-202ENST00000261517 UQCR11O14957 56 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 RBM12B-AS1Q9P1G2 102 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 IGLV8-61A0A075B6I0 122 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 PCOTHQ58A44 107 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 VWFP04275 2813 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 RETNLBQ9BQ08 111 aa2.81□□□□□ -1.96
VPS13C-202ENST00000261517 Q8N377 158 aa2.8□□□□□ -1.96
VPS13C-202ENST00000261517 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
VPS13C-202ENST00000261517 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
VPS13C-202ENST00000261517 SERTAD4-AS1Q5TG53 156 aa2.8□□□□□ -1.96
VPS13C-202ENST00000261517 TENM3Q9P273 2699 aa2.8□□□□□ -1.96
VPS13C-202ENST00000261517 TGP01266 2768 aa2.79□□□□□ -1.96
VPS13C-202ENST00000261517 SPRR1BP22528 89 aa2.79□□□□□ -1.96
VPS13C-202ENST00000261517 DMBT1Q9UGM3 2413 aaPredicted RBP2.79□□□□□ -1.96
VPS13C-202ENST00000261517 Q96NJ1 140 aa2.79□□□□□ -1.96
VPS13C-202ENST00000261517 KRTAP21-3Q3LHN1 58 aa2.78□□□□□ -1.96
VPS13C-202ENST00000261517 PLAC8Q9NZF1 115 aa2.78□□□□□ -1.96
VPS13C-202ENST00000261517 J3QL48 77 aa2.78□□□□□ -1.96
VPS13C-202ENST00000261517 PRR4Q16378 134 aa2.78□□□□□ -1.97
VPS13C-202ENST00000261517 SPRR1AP35321 89 aa2.77□□□□□ -1.97
VPS13C-202ENST00000261517 COA5Q86WW8 74 aa2.77□□□□□ -1.97
VPS13C-202ENST00000261517 BSNQ9UPA5 3926 aa2.77□□□□□ -1.97
VPS13C-202ENST00000261517 NBPF19A0A087WUL8 3843 aa2.77□□□□□ -1.97
VPS13C-202ENST00000261517 K7EQZ3 153 aa2.77□□□□□ -1.97
VPS13C-202ENST00000261517 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
VPS13C-202ENST00000261517 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
VPS13C-202ENST00000261517 PSPHP1O15172 72 aa2.76□□□□□ -1.97
VPS13C-202ENST00000261517 TNP2Q05952 138 aa2.76□□□□□ -1.97
VPS13C-202ENST00000261517 Q9UF83 564 aa2.76□□□□□ -1.97
VPS13C-202ENST00000261517 PKD1L1Q8TDX9 2849 aa2.76□□□□□ -1.97
VPS13C-202ENST00000261517 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
VPS13C-202ENST00000261517 Q1T7F1 81 aa2.75□□□□□ -1.97
VPS13C-202ENST00000261517 FAM168BA1KXE4 195 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 CHTF8P0CG12 524 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 CUBNO60494 3623 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 H7BZZ5 65 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 TENM2Q9NT68 2774 aa2.74□□□□□ -1.97
VPS13C-202ENST00000261517 FLG2Q5D862 2391 aaPredicted RBP2.74□□□□□ -1.97
VPS13C-202ENST00000261517 SVEP1Q4LDE5 3571 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 OCR1Q9BZK8 76 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 HRES1P13985 223 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 ASB16-AS1Q495Z4 193 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 LINC00483Q53H64 154 aa2.73□□□□□ -1.97
VPS13C-202ENST00000261517 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
VPS13C-202ENST00000261517 CASC10Q5T4H9 136 aa2.72□□□□□ -1.97
VPS13C-202ENST00000261517 A0A1W2PNM2 257 aa2.72□□□□□ -1.97
VPS13C-202ENST00000261517 CDC42SE1Q9NRR8 79 aa2.72□□□□□ -1.97
VPS13C-202ENST00000261517 A0A1W2PNN7 141 aa2.71□□□□□ -1.98
VPS13C-202ENST00000261517 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.98
VPS13C-202ENST00000261517 OXTP01178 125 aa2.71□□□□□ -1.98
VPS13C-202ENST00000261517 SEC61BP60468 96 aaKnown RBP2.7□□□□□ -1.98
VPS13C-202ENST00000261517 Q5XG85 94 aa2.7□□□□□ -1.98
VPS13C-202ENST00000261517 DSCR10P59022 87 aa2.7□□□□□ -1.98
VPS13C-202ENST00000261517 Q75L30 129 aa2.69□□□□□ -1.98
VPS13C-202ENST00000261517 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
VPS13C-202ENST00000261517 ZCCHC13Q8WW36 166 aaKnown RBP2.69□□□□□ -1.98
VPS13C-202ENST00000261517 CSMD1Q96PZ7 3565 aa2.69□□□□□ -1.98
VPS13C-202ENST00000261517 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
VPS13C-202ENST00000261517 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
VPS13C-202ENST00000261517 LCE6AA0A183 80 aa2.68□□□□□ -1.98
VPS13C-202ENST00000261517 Q6ZSA8 131 aa2.68□□□□□ -1.98
VPS13C-202ENST00000261517 LINC00472Q9H8W2 130 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms