RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
TMEM258-201ENST00000257262 SPRR1BP22528 89 aa4.9□□□□□ -1.63
TMEM258-201ENST00000257262 CTAG1AP78358 180 aa4.9□□□□□ -1.63
TMEM258-201ENST00000257262 C2orf91Q6ZV80 131 aa4.9□□□□□ -1.63
TMEM258-201ENST00000257262 DEFB105AQ8NG35 78 aa4.9□□□□□ -1.63
TMEM258-201ENST00000257262 RETNLBQ9BQ08 111 aa4.9□□□□□ -1.63
TMEM258-201ENST00000257262 TAL2Q16559 108 aa4.89□□□□□ -1.63
TMEM258-201ENST00000257262 CFC1BP0CG36 223 aa4.88□□□□□ -1.63
TMEM258-201ENST00000257262 CFC1P0CG37 223 aa4.88□□□□□ -1.63
TMEM258-201ENST00000257262 VAMP3Q15836 100 aa4.88□□□□□ -1.63
TMEM258-201ENST00000257262 C9orf153Q5TBE3 101 aa4.88□□□□□ -1.63
TMEM258-201ENST00000257262 LPAP08519 4548 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 LRP2P98164 4655 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 TEX49A0A1B0GTD5 131 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 SPINK1P00995 79 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 LAMTOR3Q9UHA4 124 aa4.87□□□□□ -1.63
TMEM258-201ENST00000257262 SLC25A20O43772 301 aa4.86□□□□□ -1.63
TMEM258-201ENST00000257262 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
TMEM258-201ENST00000257262 Q1RN00 199 aa4.86□□□□□ -1.63
TMEM258-201ENST00000257262 LINC00575Q6W349 94 aa4.86□□□□□ -1.63
TMEM258-201ENST00000257262 CEND1Q8N111 149 aa4.86□□□□□ -1.63
TMEM258-201ENST00000257262 RAB37Q96AX2 223 aa4.86□□□□□ -1.63
TMEM258-201ENST00000257262 NHP2Q9NX24 153 aaKnown RBP4.86□□□□□ -1.63
TMEM258-201ENST00000257262 IGLV5-48A0A075B6I7 105 aa4.85□□□□□ -1.63
TMEM258-201ENST00000257262 hADV29S1A0JD25 119 aa4.85□□□□□ -1.63
TMEM258-201ENST00000257262 H7C2G1 150 aa4.85□□□□□ -1.63
TMEM258-201ENST00000257262 SMIM29Q86T20 159 aa4.85□□□□□ -1.63
TMEM258-201ENST00000257262 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
TMEM258-201ENST00000257262 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
TMEM258-201ENST00000257262 BVES-AS1Q5T3Y7 98 aa4.84□□□□□ -1.63
TMEM258-201ENST00000257262 Q8N377 158 aa4.84□□□□□ -1.63
TMEM258-201ENST00000257262 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
TMEM258-201ENST00000257262 FXYD2P54710 66 aa4.83□□□□□ -1.64
TMEM258-201ENST00000257262 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
TMEM258-201ENST00000257262 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
TMEM258-201ENST00000257262 Q6ZQY7 126 aa4.82□□□□□ -1.64
TMEM258-201ENST00000257262 PRO1933Q9H354 126 aa4.82□□□□□ -1.64
TMEM258-201ENST00000257262 UQCR10Q9UDW1 63 aa4.82□□□□□ -1.64
TMEM258-201ENST00000257262 PRO1854Q9UHT4 67 aa4.82□□□□□ -1.64
TMEM258-201ENST00000257262 HSD52Q0P140 79 aa4.81□□□□□ -1.64
TMEM258-201ENST00000257262 A0A0G2JQZ4 141 aa4.8□□□□□ -1.64
TMEM258-201ENST00000257262 H0YGX0 51 aa4.8□□□□□ -1.64
TMEM258-201ENST00000257262 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
TMEM258-201ENST00000257262 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.8□□□□□ -1.64
TMEM258-201ENST00000257262 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
TMEM258-201ENST00000257262 FAM218AQ96MZ4 157 aa4.79□□□□□ -1.64
TMEM258-201ENST00000257262 CD164Q04900 197 aa4.78□□□□□ -1.64
TMEM258-201ENST00000257262 F8WEM9 126 aa4.77□□□□□ -1.65
TMEM258-201ENST00000257262 K7ERJ3 54 aa4.77□□□□□ -1.65
TMEM258-201ENST00000257262 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
TMEM258-201ENST00000257262 SNCGO76070 127 aa4.76□□□□□ -1.65
TMEM258-201ENST00000257262 KRTAP13-3Q3SY46 172 aa4.76□□□□□ -1.65
TMEM258-201ENST00000257262 OCIAD2Q56VL3 154 aa4.76□□□□□ -1.65
TMEM258-201ENST00000257262 PPDPFLQ8WWR9 84 aa4.76□□□□□ -1.65
TMEM258-201ENST00000257262 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
TMEM258-201ENST00000257262 A0A1B0GX51 115 aa4.75□□□□□ -1.65
TMEM258-201ENST00000257262 PSMB2P49721 201 aa4.75□□□□□ -1.65
TMEM258-201ENST00000257262 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 SMIM6P0DI80 62 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 Q5XG85 94 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 CLEC2BQ92478 149 aa4.74□□□□□ -1.65
TMEM258-201ENST00000257262 LOC105371267A0A1B0GV96 52 aa4.73□□□□□ -1.65
TMEM258-201ENST00000257262 Q6JHZ5 121 aa4.73□□□□□ -1.65
TMEM258-201ENST00000257262 H3BUT2 72 aa4.72□□□□□ -1.65
TMEM258-201ENST00000257262 COX6CP09669 75 aa4.72□□□□□ -1.65
TMEM258-201ENST00000257262 NDUFV3P56181 108 aaKnown RBP4.72□□□□□ -1.65
TMEM258-201ENST00000257262 FABP2P12104 132 aa4.71□□□□□ -1.66
TMEM258-201ENST00000257262 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
TMEM258-201ENST00000257262 TRBV7-7A0A0K0K1E9 115 aa4.7□□□□□ -1.66
TMEM258-201ENST00000257262 TCL1BO95988 128 aa4.7□□□□□ -1.66
TMEM258-201ENST00000257262 DNAL4O96015 105 aa4.7□□□□□ -1.66
TMEM258-201ENST00000257262 H3BMG7 143 aa4.69□□□□□ -1.66
TMEM258-201ENST00000257262 M0R143 59 aa4.69□□□□□ -1.66
TMEM258-201ENST00000257262 SCGB1C2P0DMR2 95 aa4.69□□□□□ -1.66
TMEM258-201ENST00000257262 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
TMEM258-201ENST00000257262 C9orf92A6NGG3 77 aa4.68□□□□□ -1.66
TMEM258-201ENST00000257262 TSTD3H0UI37 97 aa4.68□□□□□ -1.66
TMEM258-201ENST00000257262 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
TMEM258-201ENST00000257262 TMEM256-PLSCR3K7ERE1 68 aa4.67□□□□□ -1.66
TMEM258-201ENST00000257262 ASB16-AS1Q495Z4 193 aa4.67□□□□□ -1.66
TMEM258-201ENST00000257262 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
TMEM258-201ENST00000257262 MUC2Q02817 5179 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 H3BQ85 93 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 LST1O00453 97 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 TRACP01848 142 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 Q6Q795 121 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 TEN1Q86WV5 123 aa4.66□□□□□ -1.66
TMEM258-201ENST00000257262 NAA38Q9BRA0 125 aaKnown RBP4.66□□□□□ -1.66
TMEM258-201ENST00000257262 A0A1B0GV72 72 aa4.65□□□□□ -1.67
TMEM258-201ENST00000257262 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
TMEM258-201ENST00000257262 MUC17Q685J3 4493 aa4.65□□□□□ -1.67
TMEM258-201ENST00000257262 A0A1W2PNM2 257 aa4.64□□□□□ -1.67
TMEM258-201ENST00000257262 BATFQ16520 125 aa4.64□□□□□ -1.67
TMEM258-201ENST00000257262 ANKRD29Q8N6D5 301 aa4.64□□□□□ -1.67
TMEM258-201ENST00000257262 A0A087WSZ3 146 aa4.63□□□□□ -1.67
TMEM258-201ENST00000257262 BAALC-AS2P0C853 105 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms