RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 S100A7L2Q5SY68 101 aa11.88□□□□□ -0.51
NEDD8-201ENST00000250495 Q6ZRX8 168 aa11.88□□□□□ -0.51
NEDD8-201ENST00000250495 H3BMG7 143 aa11.87□□□□□ -0.51
NEDD8-201ENST00000250495 SCGB1C2P0DMR2 95 aa11.87□□□□□ -0.51
NEDD8-201ENST00000250495 RPS29P62273 56 aaKnown RBP11.87□□□□□ -0.51
NEDD8-201ENST00000250495 Q9BRP9 147 aa11.87□□□□□ -0.51
NEDD8-201ENST00000250495 TRAV13-2A0A0B4J235 113 aa11.86□□□□□ -0.51
NEDD8-201ENST00000250495 IGLV6-57P01721 117 aa11.86□□□□□ -0.51
NEDD8-201ENST00000250495 COX6CP09669 75 aa11.86□□□□□ -0.51
NEDD8-201ENST00000250495 TRIAP1O43715 76 aa11.85□□□□□ -0.51
NEDD8-201ENST00000250495 TCL1BO95988 128 aa11.85□□□□□ -0.51
NEDD8-201ENST00000250495 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
NEDD8-201ENST00000250495 H7C2G1 150 aa11.84□□□□□ -0.51
NEDD8-201ENST00000250495 ASB16-AS1Q495Z4 193 aa11.84□□□□□ -0.51
NEDD8-201ENST00000250495 TRAV23DV6A0A075B6W5 121 aa11.82□□□□□ -0.52
NEDD8-201ENST00000250495 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
NEDD8-201ENST00000250495 Q8N377 158 aa11.82□□□□□ -0.52
NEDD8-201ENST00000250495 SLC25A20O43772 301 aa11.81□□□□□ -0.52
NEDD8-201ENST00000250495 SEC61BP60468 96 aaKnown RBP11.8□□□□□ -0.52
NEDD8-201ENST00000250495 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
NEDD8-201ENST00000250495 K7ERU9 68 aa11.79□□□□□ -0.52
NEDD8-201ENST00000250495 ZNF73O43830 326 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-201ENST00000250495 OCIAD2Q56VL3 154 aa11.79□□□□□ -0.52
NEDD8-201ENST00000250495 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.53
NEDD8-201ENST00000250495 LST1O00453 97 aa11.76□□□□□ -0.53
NEDD8-201ENST00000250495 SMCPP49901 116 aaPredicted RBP11.73□□□□□ -0.53
NEDD8-201ENST00000250495 ST20-AS1Q8NBB2 130 aa11.72□□□□□ -0.53
NEDD8-201ENST00000250495 LINC01547P58512 204 aaPredicted RBP11.71□□□□□ -0.53
NEDD8-201ENST00000250495 C9JAW5 83 aa11.7□□□□□ -0.54
NEDD8-201ENST00000250495 H3BT86 120 aa11.7□□□□□ -0.54
NEDD8-201ENST00000250495 OR13C6PQ8NH95 151 aa11.7□□□□□ -0.54
NEDD8-201ENST00000250495 J3QR89 54 aa11.69□□□□□ -0.54
NEDD8-201ENST00000250495 ETDBQ3ZM63 59 aa11.69□□□□□ -0.54
NEDD8-201ENST00000250495 TEN1Q86WV5 123 aa11.69□□□□□ -0.54
NEDD8-201ENST00000250495 MTURNQ8N3F0 131 aa11.69□□□□□ -0.54
NEDD8-201ENST00000250495 TRACP01848 142 aa11.68□□□□□ -0.54
NEDD8-201ENST00000250495 CLEC2BQ92478 149 aa11.68□□□□□ -0.54
NEDD8-201ENST00000250495 KRTAP4-1Q9BYQ7 146 aa11.68□□□□□ -0.54
NEDD8-201ENST00000250495 H0YGX0 51 aa11.67□□□□□ -0.54
NEDD8-201ENST00000250495 XP32Q5T750 250 aa11.67□□□□□ -0.54
NEDD8-201ENST00000250495 ANKRD29Q8N6D5 301 aa11.67□□□□□ -0.54
NEDD8-201ENST00000250495 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
NEDD8-201ENST00000250495 DHRS4-AS1Q9P1J3 65 aa11.67□□□□□ -0.54
NEDD8-201ENST00000250495 SPRR1BP22528 89 aa11.66□□□□□ -0.54
NEDD8-201ENST00000250495 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
NEDD8-201ENST00000250495 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
NEDD8-201ENST00000250495 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
NEDD8-201ENST00000250495 A0A1B0GX51 115 aa11.6□□□□□ -0.55
NEDD8-201ENST00000250495 COX7BP24311 80 aa11.59□□□□□ -0.55
NEDD8-201ENST00000250495 HRCT1Q6UXD1 115 aa11.59□□□□□ -0.55
NEDD8-201ENST00000250495 KRTAP9-6A0A140TA67 174 aa11.58□□□□□ -0.56
NEDD8-201ENST00000250495 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
NEDD8-201ENST00000250495 C6orf99Q4VX62 202 aa11.57□□□□□ -0.56
NEDD8-201ENST00000250495 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
NEDD8-201ENST00000250495 VPS25Q9BRG1 176 aa11.54□□□□□ -0.56
NEDD8-201ENST00000250495 TEX49A0A1B0GTD5 131 aa11.53□□□□□ -0.56
NEDD8-201ENST00000250495 DNAL4O96015 105 aa11.53□□□□□ -0.56
NEDD8-201ENST00000250495 CD164Q04900 197 aa11.53□□□□□ -0.56
NEDD8-201ENST00000250495 DEFB105AQ8NG35 78 aa11.53□□□□□ -0.56
NEDD8-201ENST00000250495 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.57
NEDD8-201ENST00000250495 SNCGO76070 127 aa11.5□□□□□ -0.57
NEDD8-201ENST00000250495 BAALC-AS2P0C853 105 aa11.49□□□□□ -0.57
NEDD8-201ENST00000250495 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
NEDD8-201ENST00000250495 PCOTHQ58A44 107 aa11.47□□□□□ -0.57
NEDD8-201ENST00000250495 Q5XG85 94 aa11.45□□□□□ -0.58
NEDD8-201ENST00000250495 IGLV8-61A0A075B6I0 122 aa11.44□□□□□ -0.58
NEDD8-201ENST00000250495 LCE2DQ5TA82 110 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-201ENST00000250495 LINC00575Q6W349 94 aa11.44□□□□□ -0.58
NEDD8-201ENST00000250495 SMIM29Q86T20 159 aa11.44□□□□□ -0.58
NEDD8-201ENST00000250495 ORMDL1Q9P0S3 153 aa11.44□□□□□ -0.58
NEDD8-201ENST00000250495 LCE2CQ5TA81 110 aa11.43□□□□□ -0.58
NEDD8-201ENST00000250495 IGLV5-48A0A075B6I7 105 aa11.42□□□□□ -0.58
NEDD8-201ENST00000250495 FAM240AA0A1B0GVK7 77 aa11.42□□□□□ -0.58
NEDD8-201ENST00000250495 H3BQ85 93 aa11.42□□□□□ -0.58
NEDD8-201ENST00000250495 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
NEDD8-201ENST00000250495 C1orf195Q5TG92 126 aa11.38□□□□□ -0.59
NEDD8-201ENST00000250495 OBSCN-AS1Q96MR7 158 aa11.38□□□□□ -0.59
NEDD8-201ENST00000250495 TMEM256-PLSCR3K7ERE1 68 aa11.37□□□□□ -0.59
NEDD8-201ENST00000250495 KRTAP19-2Q3LHN2 52 aa11.37□□□□□ -0.59
NEDD8-201ENST00000250495 GHRHP01286 108 aa11.36□□□□□ -0.59
NEDD8-201ENST00000250495 ACYP1P07311 99 aa11.35□□□□□ -0.59
NEDD8-201ENST00000250495 A0A0G2JQZ4 141 aa11.34□□□□□ -0.59
NEDD8-201ENST00000250495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.33□□□□□ -0.6
NEDD8-201ENST00000250495 SIGMAR1Q99720 223 aa11.33□□□□□ -0.6
NEDD8-201ENST00000250495 JMJD7-PLA2G4BH0Y9G9 81 aa11.32□□□□□ -0.6
NEDD8-201ENST00000250495 MT1HP80294 61 aa11.31□□□□□ -0.6
NEDD8-201ENST00000250495 F8WEM9 126 aa11.28□□□□□ -0.6
NEDD8-201ENST00000250495 RPL37P61927 97 aaKnown RBP11.28□□□□□ -0.6
NEDD8-201ENST00000250495 Q6ZQY7 126 aa11.27□□□□□ -0.61
NEDD8-201ENST00000250495 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
NEDD8-201ENST00000250495 C14orf132Q9NPU4 83 aa11.23□□□□□ -0.61
NEDD8-201ENST00000250495 CRCT1Q9UGL9 99 aa11.23□□□□□ -0.61
NEDD8-201ENST00000250495 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
NEDD8-201ENST00000250495 Q6JHZ5 121 aa11.21□□□□□ -0.61
NEDD8-201ENST00000250495 CCKP06307 115 aa11.19□□□□□ -0.62
NEDD8-201ENST00000250495 PDE6GP18545 87 aa11.19□□□□□ -0.62
NEDD8-201ENST00000250495 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
NEDD8-201ENST00000250495 MT-ATP8P03928 68 aa11.18□□□□□ -0.62
NEDD8-201ENST00000250495 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
NEDD8-201ENST00000250495 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms