RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NUPR2A6NF83 97 aa10.88□□□□□ -0.67
FOXA1-201ENST00000250448 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
FOXA1-201ENST00000250448 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
FOXA1-201ENST00000250448 TNP2Q05952 138 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 SMIM29Q86T20 159 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
FOXA1-201ENST00000250448 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
FOXA1-201ENST00000250448 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 SPRR1AP35321 89 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 Q8NBF4 154 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 ST20-AS1Q8NBB2 130 aa10.85□□□□□ -0.67
FOXA1-201ENST00000250448 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
FOXA1-201ENST00000250448 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
FOXA1-201ENST00000250448 KRTAP7-1Q8IUC3 87 aa10.8□□□□□ -0.68
FOXA1-201ENST00000250448 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
FOXA1-201ENST00000250448 LCE6AA0A183 80 aa10.79□□□□□ -0.68
FOXA1-201ENST00000250448 DSCR10P59022 87 aa10.78□□□□□ -0.68
FOXA1-201ENST00000250448 UBE2BP63146 152 aa10.76□□□□□ -0.69
FOXA1-201ENST00000250448 PSCAO43653 123 aa10.76□□□□□ -0.69
FOXA1-201ENST00000250448 KMT2AQ03164 3969 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 K7EQZ3 153 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
FOXA1-201ENST00000250448 REG3GQ6UW15 175 aa10.71□□□□□ -0.69
FOXA1-201ENST00000250448 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
FOXA1-201ENST00000250448 LINC00476Q8WZB0 136 aa10.71□□□□□ -0.69
FOXA1-201ENST00000250448 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.7
FOXA1-201ENST00000250448 C8orf87E5RJ46 101 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 A8MU10 97 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 KTN1-AS1Q86SY8 53 aa10.7□□□□□ -0.7
FOXA1-201ENST00000250448 HCG22E2RYF7 251 aa10.68□□□□□ -0.7
FOXA1-201ENST00000250448 hDV103S1A0JD37 113 aa10.68□□□□□ -0.7
FOXA1-201ENST00000250448 PRR26Q8N8Z3 221 aa10.67□□□□□ -0.7
FOXA1-201ENST00000250448 A0A0G2JQZ4 141 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 A0A1W2PNN7 141 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 LY6G6CO95867 125 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
FOXA1-201ENST00000250448 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
FOXA1-201ENST00000250448 DNAH2Q9P225 4427 aa10.65□□□□□ -0.7
FOXA1-201ENST00000250448 WWC2-AS2Q96NR7 200 aa10.64□□□□□ -0.71
FOXA1-201ENST00000250448 PSPHP1O15172 72 aa10.63□□□□□ -0.71
FOXA1-201ENST00000250448 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
FOXA1-201ENST00000250448 C1orf64Q8NEQ6 169 aa10.62□□□□□ -0.71
FOXA1-201ENST00000250448 PRLHP81277 87 aa10.61□□□□□ -0.71
FOXA1-201ENST00000250448 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
FOXA1-201ENST00000250448 IGLV8-61A0A075B6I0 122 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 A0A087WSZ3 146 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 WFDC13Q8IUB5 93 aa10.59□□□□□ -0.71
FOXA1-201ENST00000250448 A0A096LNI7 61 aa10.58□□□□□ -0.72
FOXA1-201ENST00000250448 Q6ZR54 194 aa10.57□□□□□ -0.72
FOXA1-201ENST00000250448 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
FOXA1-201ENST00000250448 HYDINQ4G0P3 5121 aa10.56□□□□□ -0.72
FOXA1-201ENST00000250448 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
FOXA1-201ENST00000250448 PRR4Q16378 134 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 Q1T7F1 81 aa10.55□□□□□ -0.72
FOXA1-201ENST00000250448 NDUFB1O75438 58 aa10.54□□□□□ -0.72
FOXA1-201ENST00000250448 UBE2AP49459 152 aa10.53□□□□□ -0.72
FOXA1-201ENST00000250448 MP68P56378 58 aa10.53□□□□□ -0.72
FOXA1-201ENST00000250448 RPL37AP61513 92 aaKnown RBP10.53□□□□□ -0.72
FOXA1-201ENST00000250448 C14orf177Q52M58 125 aa10.52□□□□□ -0.72
FOXA1-201ENST00000250448 A0A087WTM6 91 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
FOXA1-201ENST00000250448 SPTSSBQ8NFR3 76 aa10.51□□□□□ -0.73
FOXA1-201ENST00000250448 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
FOXA1-201ENST00000250448 LINC00208Q96KT6 92 aa10.48□□□□□ -0.73
FOXA1-201ENST00000250448 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 PANO1I0J062 215 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 C9orf163Q8N9P6 203 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 CASC2Q6XLA1 102 aa10.47□□□□□ -0.73
FOXA1-201ENST00000250448 ALMS1Q8TCU4 4167 aa10.46□□□□□ -0.74
FOXA1-201ENST00000250448 DNAH17Q9UFH2 4485 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 SPRR1BP22528 89 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 H0Y9P7 68 aa10.45□□□□□ -0.74
FOXA1-201ENST00000250448 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
FOXA1-201ENST00000250448 A8MUN3 132 aa10.44□□□□□ -0.74
FOXA1-201ENST00000250448 A8MWP4 228 aa10.43□□□□□ -0.74
FOXA1-201ENST00000250448 H3BPC8 53 aa10.43□□□□□ -0.74
FOXA1-201ENST00000250448 H0Y9J4 135 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 NDUFS5O43920 106 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 LINC00472Q9H8W2 130 aa10.42□□□□□ -0.74
FOXA1-201ENST00000250448 DNAH6Q9C0G6 4158 aa10.41□□□□□ -0.74
FOXA1-201ENST00000250448 RTL8CO15255 209 aa10.4□□□□□ -0.74
FOXA1-201ENST00000250448 SPANXA2-OT1Q8N9U9 137 aa10.4□□□□□ -0.74
FOXA1-201ENST00000250448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
FOXA1-201ENST00000250448 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.75
FOXA1-201ENST00000250448 SACSQ9NZJ4 4579 aa10.39□□□□□ -0.75
FOXA1-201ENST00000250448 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
FOXA1-201ENST00000250448 DNAH11Q96DT5 4516 aa10.35□□□□□ -0.75
FOXA1-201ENST00000250448 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
FOXA1-201ENST00000250448 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
FOXA1-201ENST00000250448 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
FOXA1-201ENST00000250448 A6NN06 94 aa10.33□□□□□ -0.76
FOXA1-201ENST00000250448 FAT2Q9NYQ8 4349 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms