RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C9JAW5 83 aa7.89□□□□□ -1.15
LSM8-201ENST00000249299 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
LSM8-201ENST00000249299 KRTAP4-2Q9BYR5 136 aa7.89□□□□□ -1.15
LSM8-201ENST00000249299 ERC2-IT1O76042 136 aa7.87□□□□□ -1.15
LSM8-201ENST00000249299 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
LSM8-201ENST00000249299 SPRR1BP22528 89 aa7.87□□□□□ -1.15
LSM8-201ENST00000249299 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
LSM8-201ENST00000249299 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
LSM8-201ENST00000249299 SPINK6Q6UWN8 80 aa7.85□□□□□ -1.15
LSM8-201ENST00000249299 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
LSM8-201ENST00000249299 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
LSM8-201ENST00000249299 LINC01547P58512 204 aaPredicted RBP7.84□□□□□ -1.15
LSM8-201ENST00000249299 KRTAP10-4P60372 401 aaPredicted RBP7.83□□□□□ -1.16
LSM8-201ENST00000249299 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
LSM8-201ENST00000249299 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
LSM8-201ENST00000249299 Q8N377 158 aa7.83□□□□□ -1.16
LSM8-201ENST00000249299 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
LSM8-201ENST00000249299 EPPK1P58107 5090 aaKnown RBP7.82□□□□□ -1.16
LSM8-201ENST00000249299 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
LSM8-201ENST00000249299 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
LSM8-201ENST00000249299 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
LSM8-201ENST00000249299 Q8N1X5 172 aa7.8□□□□□ -1.16
LSM8-201ENST00000249299 RYR1P21817 5038 aa7.8□□□□□ -1.16
LSM8-201ENST00000249299 NDUFV3P56181 108 aaKnown RBP7.78□□□□□ -1.16
LSM8-201ENST00000249299 FAM229BQ4G0N7 80 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 LAMTOR3Q9UHA4 124 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 FAT1Q14517 4588 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 HSPG2P98160 4391 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 Q5VSD8 79 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 TEN1Q86WV5 123 aa7.78□□□□□ -1.16
LSM8-201ENST00000249299 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
LSM8-201ENST00000249299 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
LSM8-201ENST00000249299 F8WEM9 126 aa7.77□□□□□ -1.17
LSM8-201ENST00000249299 MTURNQ8N3F0 131 aa7.77□□□□□ -1.17
LSM8-201ENST00000249299 PDE6GP18545 87 aa7.76□□□□□ -1.17
LSM8-201ENST00000249299 RBM3P98179 157 aaKnown RBP7.75□□□□□ -1.17
LSM8-201ENST00000249299 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
LSM8-201ENST00000249299 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
LSM8-201ENST00000249299 ETDBQ3ZM63 59 aa7.73□□□□□ -1.17
LSM8-201ENST00000249299 Q6JHZ5 121 aa7.73□□□□□ -1.17
LSM8-201ENST00000249299 KRTAP19-4Q3LI73 84 aa7.72□□□□□ -1.17
LSM8-201ENST00000249299 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
LSM8-201ENST00000249299 LOC110117498A0A087WWA1 95 aa7.71□□□□□ -1.18
LSM8-201ENST00000249299 CRYGAP11844 174 aa7.71□□□□□ -1.18
LSM8-201ENST00000249299 TRBV7-4A0A0J9YYF1 115 aa7.7□□□□□ -1.18
LSM8-201ENST00000249299 SSBP3-AS1Q7Z2R9 100 aa7.7□□□□□ -1.18
LSM8-201ENST00000249299 BIRC6Q9NR09 4857 aa7.69□□□□□ -1.18
LSM8-201ENST00000249299 A0A1B0GW54 56 aa7.69□□□□□ -1.18
LSM8-201ENST00000249299 LCE4AQ5TA78 99 aa7.69□□□□□ -1.18
LSM8-201ENST00000249299 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
LSM8-201ENST00000249299 Q8NBF4 154 aa7.69□□□□□ -1.18
LSM8-201ENST00000249299 J3QR89 54 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 Q6Q795 121 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 Q6ZQT0 140 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 C14orf132Q9NPU4 83 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
LSM8-201ENST00000249299 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
LSM8-201ENST00000249299 CCKP06307 115 aa7.64□□□□□ -1.19
LSM8-201ENST00000249299 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
LSM8-201ENST00000249299 A0A087X002 238 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 CD164Q04900 197 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 MOBPQ13875 183 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
LSM8-201ENST00000249299 FAM240AA0A1B0GVK7 77 aa7.61□□□□□ -1.19
LSM8-201ENST00000249299 ACYP1P07311 99 aa7.61□□□□□ -1.19
LSM8-201ENST00000249299 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
LSM8-201ENST00000249299 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
LSM8-201ENST00000249299 PKHD1L1Q86WI1 4243 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 A0A1B0GV72 72 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 K7ERU9 68 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 OXTP01178 125 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 PRR26Q8N8Z3 221 aa7.58□□□□□ -1.2
LSM8-201ENST00000249299 HERC2O95714 4834 aa7.57□□□□□ -1.2
LSM8-201ENST00000249299 KRTAP9-7A8MTY7 169 aa7.56□□□□□ -1.2
LSM8-201ENST00000249299 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
LSM8-201ENST00000249299 SPINK1P00995 79 aa7.55□□□□□ -1.2
LSM8-201ENST00000249299 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
LSM8-201ENST00000249299 Q5XG85 94 aa7.55□□□□□ -1.2
LSM8-201ENST00000249299 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
LSM8-201ENST00000249299 TRBV7-7A0A0K0K1E9 115 aa7.54□□□□□ -1.2
LSM8-201ENST00000249299 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
LSM8-201ENST00000249299 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
LSM8-201ENST00000249299 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.2
LSM8-201ENST00000249299 KRTAP29-1A8MX34 341 aaPredicted RBP7.52□□□□□ -1.21
LSM8-201ENST00000249299 ASB16-AS1Q495Z4 193 aa7.51□□□□□ -1.21
LSM8-201ENST00000249299 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
LSM8-201ENST00000249299 A0A087WSZ3 146 aa7.5□□□□□ -1.21
LSM8-201ENST00000249299 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
LSM8-201ENST00000249299 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
LSM8-201ENST00000249299 LINC00846Q9NV44 126 aa7.49□□□□□ -1.21
LSM8-201ENST00000249299 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
LSM8-201ENST00000249299 NREPQ16612 68 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms