RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
HCFC1R1-201ENST00000248089 Q5XG85 94 aa11.6□□□□□ -0.55
HCFC1R1-201ENST00000248089 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
HCFC1R1-201ENST00000248089 CFC1P0CG37 223 aa11.59□□□□□ -0.55
HCFC1R1-201ENST00000248089 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.59□□□□□ -0.55
HCFC1R1-201ENST00000248089 KRTAP4-1Q9BYQ7 146 aa11.59□□□□□ -0.55
HCFC1R1-201ENST00000248089 C1orf195Q5TG92 126 aa11.58□□□□□ -0.56
HCFC1R1-201ENST00000248089 C2orf91Q6ZV80 131 aa11.58□□□□□ -0.56
HCFC1R1-201ENST00000248089 LCE2AQ5TA79 106 aaPredicted RBP11.57□□□□□ -0.56
HCFC1R1-201ENST00000248089 A0A0B4J2C4 111 aa11.55□□□□□ -0.56
HCFC1R1-201ENST00000248089 TCL1BO95988 128 aa11.55□□□□□ -0.56
HCFC1R1-201ENST00000248089 Q6JHZ5 121 aa11.54□□□□□ -0.56
HCFC1R1-201ENST00000248089 CLEC2BQ92478 149 aa11.54□□□□□ -0.56
HCFC1R1-201ENST00000248089 IGFL1Q6UW32 110 aa11.53□□□□□ -0.56
HCFC1R1-201ENST00000248089 CEND1Q8N111 149 aa11.53□□□□□ -0.56
HCFC1R1-201ENST00000248089 IGLV8-61A0A075B6I0 122 aa11.52□□□□□ -0.57
HCFC1R1-201ENST00000248089 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.57
HCFC1R1-201ENST00000248089 PPDPFLQ8WWR9 84 aa11.52□□□□□ -0.57
HCFC1R1-201ENST00000248089 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.57
HCFC1R1-201ENST00000248089 TMEM238LA0A1B0GVL6 79 aa11.49□□□□□ -0.57
HCFC1R1-201ENST00000248089 A6NJY4 79 aa11.49□□□□□ -0.57
HCFC1R1-201ENST00000248089 SNCGO76070 127 aa11.49□□□□□ -0.57
HCFC1R1-201ENST00000248089 H3BUT2 72 aa11.48□□□□□ -0.57
HCFC1R1-201ENST00000248089 PCOTHQ58A44 107 aa11.48□□□□□ -0.57
HCFC1R1-201ENST00000248089 TRBV7-7A0A0K0K1E9 115 aa11.47□□□□□ -0.57
HCFC1R1-201ENST00000248089 H0YGX0 51 aa11.47□□□□□ -0.57
HCFC1R1-201ENST00000248089 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
HCFC1R1-201ENST00000248089 FXYD2P54710 66 aa11.46□□□□□ -0.57
HCFC1R1-201ENST00000248089 PYY3Q5JQD4 70 aa11.46□□□□□ -0.57
HCFC1R1-201ENST00000248089 PRO1854Q9UHT4 67 aa11.46□□□□□ -0.57
HCFC1R1-201ENST00000248089 TMA7Q9Y2S6 64 aaKnown RBP11.45□□□□□ -0.58
HCFC1R1-201ENST00000248089 TRIAP1O43715 76 aa11.38□□□□□ -0.59
HCFC1R1-201ENST00000248089 NDUFV3P56181 108 aaKnown RBP11.38□□□□□ -0.59
HCFC1R1-201ENST00000248089 HSD52Q0P140 79 aa11.38□□□□□ -0.59
HCFC1R1-201ENST00000248089 RPL37P61927 97 aaKnown RBP11.36□□□□□ -0.59
HCFC1R1-201ENST00000248089 A0A1B0GX51 115 aa11.35□□□□□ -0.59
HCFC1R1-201ENST00000248089 K7ERJ3 54 aa11.35□□□□□ -0.59
HCFC1R1-201ENST00000248089 FABP2P12104 132 aa11.35□□□□□ -0.59
HCFC1R1-201ENST00000248089 LST1O00453 97 aa11.33□□□□□ -0.6
HCFC1R1-201ENST00000248089 GHRHP01286 108 aa11.33□□□□□ -0.6
HCFC1R1-201ENST00000248089 PSMB2P49721 201 aa11.32□□□□□ -0.6
HCFC1R1-201ENST00000248089 H3BMG7 143 aa11.31□□□□□ -0.6
HCFC1R1-201ENST00000248089 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
HCFC1R1-201ENST00000248089 TEN1Q86WV5 123 aa11.3□□□□□ -0.6
HCFC1R1-201ENST00000248089 KRTAP9-2Q9BYQ4 174 aa11.3□□□□□ -0.6
HCFC1R1-201ENST00000248089 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
HCFC1R1-201ENST00000248089 DNAL4O96015 105 aa11.29□□□□□ -0.6
HCFC1R1-201ENST00000248089 Q6Q795 121 aa11.29□□□□□ -0.6
HCFC1R1-201ENST00000248089 OBSCN-AS1Q96MR7 158 aa11.28□□□□□ -0.6
HCFC1R1-201ENST00000248089 A0A087WSZ3 146 aa11.26□□□□□ -0.61
HCFC1R1-201ENST00000248089 A0A1B0GV72 72 aa11.26□□□□□ -0.61
HCFC1R1-201ENST00000248089 COX6CP09669 75 aa11.25□□□□□ -0.61
HCFC1R1-201ENST00000248089 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
HCFC1R1-201ENST00000248089 ORMDL1Q9P0S3 153 aa11.25□□□□□ -0.61
HCFC1R1-201ENST00000248089 KRTAP19-2Q3LHN2 52 aa11.23□□□□□ -0.61
HCFC1R1-201ENST00000248089 A0A1W2PNM2 257 aa11.19□□□□□ -0.62
HCFC1R1-201ENST00000248089 H3BQ85 93 aa11.18□□□□□ -0.62
HCFC1R1-201ENST00000248089 ANKRD29Q8N6D5 301 aa11.18□□□□□ -0.62
HCFC1R1-201ENST00000248089 Q96NJ1 140 aa11.18□□□□□ -0.62
HCFC1R1-201ENST00000248089 Q75L30 129 aa11.17□□□□□ -0.62
HCFC1R1-201ENST00000248089 TMEM256-PLSCR3K7ERE1 68 aa11.16□□□□□ -0.62
HCFC1R1-201ENST00000248089 ATP11AUNQ6ZP68 121 aa11.16□□□□□ -0.62
HCFC1R1-201ENST00000248089 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
HCFC1R1-201ENST00000248089 MT1HP80294 61 aa11.14□□□□□ -0.63
HCFC1R1-201ENST00000248089 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
HCFC1R1-201ENST00000248089 COX6B2Q6YFQ2 88 aa11.12□□□□□ -0.63
HCFC1R1-201ENST00000248089 TRACP01848 142 aa11.11□□□□□ -0.63
HCFC1R1-201ENST00000248089 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
HCFC1R1-201ENST00000248089 CCKP06307 115 aa11.09□□□□□ -0.63
HCFC1R1-201ENST00000248089 DSCR10P59022 87 aa11.08□□□□□ -0.64
HCFC1R1-201ENST00000248089 UBE2V1Q13404 147 aa11.08□□□□□ -0.64
HCFC1R1-201ENST00000248089 IGKV4-1P06312 121 aa11.06□□□□□ -0.64
HCFC1R1-201ENST00000248089 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
HCFC1R1-201ENST00000248089 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
HCFC1R1-201ENST00000248089 A8MUU9 505 aa11.02□□□□□ -0.65
HCFC1R1-201ENST00000248089 M0R143 59 aa11.02□□□□□ -0.65
HCFC1R1-201ENST00000248089 DEFB116Q30KQ4 102 aa11.02□□□□□ -0.65
HCFC1R1-201ENST00000248089 M0R2T5 61 aa11□□□□□ -0.65
HCFC1R1-201ENST00000248089 RBM3P98179 157 aaKnown RBP11□□□□□ -0.65
HCFC1R1-201ENST00000248089 DSCR8Q96T75 97 aa10.99□□□□□ -0.65
HCFC1R1-201ENST00000248089 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
HCFC1R1-201ENST00000248089 BAALC-AS2P0C853 105 aa10.98□□□□□ -0.65
HCFC1R1-201ENST00000248089 SMIM6P0DI80 62 aa10.98□□□□□ -0.65
HCFC1R1-201ENST00000248089 LINC00313P59037 77 aa10.98□□□□□ -0.65
HCFC1R1-201ENST00000248089 LINC00472Q9H8W2 130 aa10.97□□□□□ -0.65
HCFC1R1-201ENST00000248089 ATXN8Q156A1 80 aa10.94□□□□□ -0.66
HCFC1R1-201ENST00000248089 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
HCFC1R1-201ENST00000248089 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
HCFC1R1-201ENST00000248089 FLGP20930 4061 aaPredicted RBP10.93□□□□□ -0.66
HCFC1R1-201ENST00000248089 C9JAW5 83 aa10.92□□□□□ -0.66
HCFC1R1-201ENST00000248089 KRTAP10-6P60371 365 aaPredicted RBP10.92□□□□□ -0.66
HCFC1R1-201ENST00000248089 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
HCFC1R1-201ENST00000248089 KRTAP16-1A8MUX0 517 aa10.91□□□□□ -0.66
HCFC1R1-201ENST00000248089 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
HCFC1R1-201ENST00000248089 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
HCFC1R1-201ENST00000248089 TSTD3H0UI37 97 aa10.86□□□□□ -0.67
HCFC1R1-201ENST00000248089 BATFQ16520 125 aa10.86□□□□□ -0.67
HCFC1R1-201ENST00000248089 TRBV20-1A0A075B6N2 111 aa10.85□□□□□ -0.67
HCFC1R1-201ENST00000248089 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
HCFC1R1-201ENST00000248089 JMJD7-PLA2G4BH0Y9G9 81 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms