RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 CASC2Q6XLA1 102 aa9.17□□□□□ -0.94
PTK7-201ENST00000230418 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
PTK7-201ENST00000230418 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
PTK7-201ENST00000230418 HCG22E2RYF7 251 aa9.15□□□□□ -0.95
PTK7-201ENST00000230418 K7EQZ3 153 aa9.15□□□□□ -0.95
PTK7-201ENST00000230418 PLA2G2DQ9UNK4 145 aa9.14□□□□□ -0.95
PTK7-201ENST00000230418 BCE1O60756 84 aa9.14□□□□□ -0.95
PTK7-201ENST00000230418 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
PTK7-201ENST00000230418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
PTK7-201ENST00000230418 CRYGAP11844 174 aa9.13□□□□□ -0.95
PTK7-201ENST00000230418 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
PTK7-201ENST00000230418 TGP01266 2768 aa9.12□□□□□ -0.95
PTK7-201ENST00000230418 NDUFC1O43677 76 aa9.1□□□□□ -0.95
PTK7-201ENST00000230418 WWC2-AS2Q96NR7 200 aa9.08□□□□□ -0.96
PTK7-201ENST00000230418 AKAP9Q99996 3911 aa9.07□□□□□ -0.96
PTK7-201ENST00000230418 TNP2Q05952 138 aa9.07□□□□□ -0.96
PTK7-201ENST00000230418 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
PTK7-201ENST00000230418 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
PTK7-201ENST00000230418 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
PTK7-201ENST00000230418 H0Y9P7 68 aa9.06□□□□□ -0.96
PTK7-201ENST00000230418 PANO1I0J062 215 aa9.06□□□□□ -0.96
PTK7-201ENST00000230418 IGLV5-48A0A075B6I7 105 aa9.05□□□□□ -0.96
PTK7-201ENST00000230418 CHKB-CPT1BH3BT56 60 aa9.05□□□□□ -0.96
PTK7-201ENST00000230418 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
PTK7-201ENST00000230418 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
PTK7-201ENST00000230418 SPRR1AP35321 89 aa9.02□□□□□ -0.97
PTK7-201ENST00000230418 KRTAP7-1Q8IUC3 87 aa9.01□□□□□ -0.97
PTK7-201ENST00000230418 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
PTK7-201ENST00000230418 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
PTK7-201ENST00000230418 C1orf64Q8NEQ6 169 aa8.98□□□□□ -0.97
PTK7-201ENST00000230418 ZNF861PO60384 105 aa8.97□□□□□ -0.97
PTK7-201ENST00000230418 KRTAP11-1Q8IUC1 163 aa8.97□□□□□ -0.97
PTK7-201ENST00000230418 A0A0U1RQV1 116 aa8.96□□□□□ -0.97
PTK7-201ENST00000230418 SMR3BP02814 79 aaPredicted RBP8.96□□□□□ -0.98
PTK7-201ENST00000230418 A0A1B0GW54 56 aa8.95□□□□□ -0.98
PTK7-201ENST00000230418 SMIM26A0A096LP01 95 aa8.94□□□□□ -0.98
PTK7-201ENST00000230418 KRTAP4-16G5E9R7 235 aaPredicted RBP8.94□□□□□ -0.98
PTK7-201ENST00000230418 SPRR4Q96PI1 79 aa8.94□□□□□ -0.98
PTK7-201ENST00000230418 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
PTK7-201ENST00000230418 PSPHP1O15172 72 aa8.93□□□□□ -0.98
PTK7-201ENST00000230418 DSCR10P59022 87 aa8.93□□□□□ -0.98
PTK7-201ENST00000230418 A8MWP4 228 aa8.9□□□□□ -0.98
PTK7-201ENST00000230418 H7BZZ5 65 aa8.9□□□□□ -0.98
PTK7-201ENST00000230418 C4orf26Q17RF5 130 aa8.9□□□□□ -0.98
PTK7-201ENST00000230418 PRR15Q8IV56 129 aa8.89□□□□□ -0.99
PTK7-201ENST00000230418 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
PTK7-201ENST00000230418 SPTSSBQ8NFR3 76 aa8.88□□□□□ -0.99
PTK7-201ENST00000230418 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
PTK7-201ENST00000230418 IGKV2D-30A0A075B6S6 120 aa8.87□□□□□ -0.99
PTK7-201ENST00000230418 IGKV2-30P06310 120 aa8.87□□□□□ -0.99
PTK7-201ENST00000230418 TRAV22A0A0B4J277 110 aa8.86□□□□□ -0.99
PTK7-201ENST00000230418 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
PTK7-201ENST00000230418 TYMSOSQ8TAI1 123 aa8.86□□□□□ -0.99
PTK7-201ENST00000230418 KRTAP10-2P60368 255 aa8.85□□□□□ -0.99
PTK7-201ENST00000230418 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
PTK7-201ENST00000230418 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -0.99
PTK7-201ENST00000230418 OCR1Q9BZK8 76 aa8.83□□□□□ -1
PTK7-201ENST00000230418 Q6ZRN7 208 aaPredicted RBP8.82□□□□□ -1
PTK7-201ENST00000230418 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
PTK7-201ENST00000230418 SPINK1P00995 79 aa8.81□□□□□ -1
PTK7-201ENST00000230418 C8orf17Q9NRJ1 99 aa8.8□□□□□ -1
PTK7-201ENST00000230418 PRR15LQ9BU68 103 aa8.79□□□□□ -1
PTK7-201ENST00000230418 CSMD3Q7Z407 3707 aa8.79□□□□□ -1
PTK7-201ENST00000230418 A6NED7 52 aa8.79□□□□□ -1
PTK7-201ENST00000230418 LINC00313P59037 77 aa8.78□□□□□ -1
PTK7-201ENST00000230418 RPS28P62857 69 aaKnown RBP8.78□□□□□ -1
PTK7-201ENST00000230418 LIMD2Q9BT23 127 aa8.78□□□□□ -1
PTK7-201ENST00000230418 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
PTK7-201ENST00000230418 Q6ZR54 194 aa8.77□□□□□ -1.01
PTK7-201ENST00000230418 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
PTK7-201ENST00000230418 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
PTK7-201ENST00000230418 TP53AIP1Q9HCN2 124 aa8.74□□□□□ -1.01
PTK7-201ENST00000230418 KRTAP10-1P60331 282 aa8.74□□□□□ -1.01
PTK7-201ENST00000230418 Q96NJ1 140 aa8.72□□□□□ -1.01
PTK7-201ENST00000230418 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.01
PTK7-201ENST00000230418 SPRR1BP22528 89 aa8.71□□□□□ -1.02
PTK7-201ENST00000230418 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.02
PTK7-201ENST00000230418 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.02
PTK7-201ENST00000230418 FBN3Q75N90 2809 aa8.69□□□□□ -1.02
PTK7-201ENST00000230418 LINC00472Q9H8W2 130 aa8.69□□□□□ -1.02
PTK7-201ENST00000230418 IGLV8-61A0A075B6I0 122 aa8.69□□□□□ -1.02
PTK7-201ENST00000230418 V9GYY9 64 aa8.69□□□□□ -1.02
PTK7-201ENST00000230418 C9orf92A6NGG3 77 aa8.66□□□□□ -1.02
PTK7-201ENST00000230418 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
PTK7-201ENST00000230418 SEC61GP60059 68 aa8.66□□□□□ -1.02
PTK7-201ENST00000230418 PRR26Q8N8Z3 221 aa8.65□□□□□ -1.03
PTK7-201ENST00000230418 MMP24-AS1A0A0U1RRL7 71 aa8.64□□□□□ -1.03
PTK7-201ENST00000230418 FAM229AH3BQW9 127 aa8.63□□□□□ -1.03
PTK7-201ENST00000230418 OXTP01178 125 aa8.63□□□□□ -1.03
PTK7-201ENST00000230418 H3BPC8 53 aa8.62□□□□□ -1.03
PTK7-201ENST00000230418 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
PTK7-201ENST00000230418 A8MUN3 132 aa8.61□□□□□ -1.03
PTK7-201ENST00000230418 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
PTK7-201ENST00000230418 COA5Q86WW8 74 aa8.6□□□□□ -1.03
PTK7-201ENST00000230418 A0A087X002 238 aa8.6□□□□□ -1.03
PTK7-201ENST00000230418 MEGF8Q7Z7M0 2845 aa8.58□□□□□ -1.04
PTK7-201ENST00000230418 FAM229BQ4G0N7 80 aa8.57□□□□□ -1.04
PTK7-201ENST00000230418 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
PTK7-201ENST00000230418 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
PTK7-201ENST00000230418 LOC101927531A0A1B0GV80 90 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms