RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 C11orf45Q8TAV5 145 aa10.71□□□□□ -0.69
RAB35-201ENST00000229340 H3BS24 57 aa10.71□□□□□ -0.69
RAB35-201ENST00000229340 IGFL1Q6UW32 110 aa10.71□□□□□ -0.7
RAB35-201ENST00000229340 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.7
RAB35-201ENST00000229340 LCA10Q71F78 164 aa10.7□□□□□ -0.7
RAB35-201ENST00000229340 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
RAB35-201ENST00000229340 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
RAB35-201ENST00000229340 MAST4O15021 2626 aa10.69□□□□□ -0.7
RAB35-201ENST00000229340 A6NED7 52 aa10.69□□□□□ -0.7
RAB35-201ENST00000229340 RBM12B-AS1Q9P1G2 102 aa10.68□□□□□ -0.7
RAB35-201ENST00000229340 SPRR1AP35321 89 aa10.67□□□□□ -0.7
RAB35-201ENST00000229340 KTN1-AS1Q86SY8 53 aa10.67□□□□□ -0.7
RAB35-201ENST00000229340 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
RAB35-201ENST00000229340 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
RAB35-201ENST00000229340 CASC2Q6XLA1 102 aa10.64□□□□□ -0.71
RAB35-201ENST00000229340 FBN1P35555 2871 aaKnown RBP10.64□□□□□ -0.71
RAB35-201ENST00000229340 NSD1Q96L73 2696 aaPredicted RBP10.64□□□□□ -0.71
RAB35-201ENST00000229340 PRLHP81277 87 aa10.63□□□□□ -0.71
RAB35-201ENST00000229340 KRTAP29-1A8MX34 341 aaPredicted RBP10.62□□□□□ -0.71
RAB35-201ENST00000229340 CSMD3Q7Z407 3707 aa10.62□□□□□ -0.71
RAB35-201ENST00000229340 COA5Q86WW8 74 aa10.61□□□□□ -0.71
RAB35-201ENST00000229340 SPANXA2-OT1Q8N9U9 137 aa10.6□□□□□ -0.71
RAB35-201ENST00000229340 CNBPP62633 177 aaKnown RBP10.59□□□□□ -0.71
RAB35-201ENST00000229340 PCOTHQ58A44 107 aa10.59□□□□□ -0.71
RAB35-201ENST00000229340 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
RAB35-201ENST00000229340 ATP11AUNQ6ZP68 121 aa10.57□□□□□ -0.72
RAB35-201ENST00000229340 PLA2G2DQ9UNK4 145 aa10.57□□□□□ -0.72
RAB35-201ENST00000229340 LINC01556Q5JQF7 62 aa10.56□□□□□ -0.72
RAB35-201ENST00000229340 SPAG11AQ6PDA7 123 aa10.56□□□□□ -0.72
RAB35-201ENST00000229340 Q75L30 129 aa10.56□□□□□ -0.72
RAB35-201ENST00000229340 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
RAB35-201ENST00000229340 A0A096LNI7 61 aa10.56□□□□□ -0.72
RAB35-201ENST00000229340 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
RAB35-201ENST00000229340 A6NN06 94 aa10.54□□□□□ -0.72
RAB35-201ENST00000229340 IGLV5-37A0A075B6J1 123 aa10.54□□□□□ -0.72
RAB35-201ENST00000229340 INAFM1C9JVW0 142 aa10.52□□□□□ -0.72
RAB35-201ENST00000229340 H0Y9J4 135 aa10.52□□□□□ -0.73
RAB35-201ENST00000229340 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
RAB35-201ENST00000229340 TENM2Q9NT68 2774 aa10.5□□□□□ -0.73
RAB35-201ENST00000229340 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
RAB35-201ENST00000229340 H3BNG1 76 aa10.49□□□□□ -0.73
RAB35-201ENST00000229340 H3BPC8 53 aa10.49□□□□□ -0.73
RAB35-201ENST00000229340 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
RAB35-201ENST00000229340 COL7A1Q02388 2944 aa10.48□□□□□ -0.73
RAB35-201ENST00000229340 ANK2Q01484 3957 aa10.48□□□□□ -0.73
RAB35-201ENST00000229340 CDC42SE1Q9NRR8 79 aa10.48□□□□□ -0.73
RAB35-201ENST00000229340 A8MWP4 228 aa10.47□□□□□ -0.73
RAB35-201ENST00000229340 MOBPQ13875 183 aa10.47□□□□□ -0.73
RAB35-201ENST00000229340 NDUFS5O43920 106 aa10.47□□□□□ -0.73
RAB35-201ENST00000229340 IGLV7-46A0A075B6I9 117 aa10.46□□□□□ -0.74
RAB35-201ENST00000229340 SPINK7P58062 85 aa10.46□□□□□ -0.74
RAB35-201ENST00000229340 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
RAB35-201ENST00000229340 STAB1Q9NY15 2570 aa10.44□□□□□ -0.74
RAB35-201ENST00000229340 LINC00472Q9H8W2 130 aa10.44□□□□□ -0.74
RAB35-201ENST00000229340 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
RAB35-201ENST00000229340 IGLV8-61A0A075B6I0 122 aa10.42□□□□□ -0.74
RAB35-201ENST00000229340 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
RAB35-201ENST00000229340 DNAH10OSP0CZ25 163 aa10.42□□□□□ -0.74
RAB35-201ENST00000229340 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
RAB35-201ENST00000229340 C7orf65Q6ZTY9 151 aa10.41□□□□□ -0.74
RAB35-201ENST00000229340 KRTAP11-1Q8IUC1 163 aa10.39□□□□□ -0.75
RAB35-201ENST00000229340 DNAH10Q8IVF4 4471 aa10.39□□□□□ -0.75
RAB35-201ENST00000229340 LINC01558Q9Y6Z2 57 aa10.38□□□□□ -0.75
RAB35-201ENST00000229340 HRES1P13985 223 aa10.34□□□□□ -0.75
RAB35-201ENST00000229340 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
RAB35-201ENST00000229340 PRAC1Q96KF2 57 aa10.33□□□□□ -0.76
RAB35-201ENST00000229340 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
RAB35-201ENST00000229340 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
RAB35-201ENST00000229340 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
RAB35-201ENST00000229340 NBEAL1Q6ZS30 2694 aa10.31□□□□□ -0.76
RAB35-201ENST00000229340 DNAH1Q9P2D7 4330 aa10.31□□□□□ -0.76
RAB35-201ENST00000229340 LYSTQ99698 3801 aa10.28□□□□□ -0.76
RAB35-201ENST00000229340 IGHV6-1A0A0B4J1U7 121 aa10.27□□□□□ -0.77
RAB35-201ENST00000229340 ADM2Q7Z4H4 148 aa10.27□□□□□ -0.77
RAB35-201ENST00000229340 LINC00313P59037 77 aa10.26□□□□□ -0.77
RAB35-201ENST00000229340 IGLV9-49A0A0B4J1Y8 123 aa10.25□□□□□ -0.77
RAB35-201ENST00000229340 K7EIL1 84 aa10.24□□□□□ -0.77
RAB35-201ENST00000229340 C8orf87E5RJ46 101 aa10.23□□□□□ -0.77
RAB35-201ENST00000229340 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
RAB35-201ENST00000229340 Q96NJ1 140 aa10.22□□□□□ -0.77
RAB35-201ENST00000229340 TP53AIP1Q9HCN2 124 aa10.21□□□□□ -0.77
RAB35-201ENST00000229340 SPRR1BP22528 89 aa10.2□□□□□ -0.78
RAB35-201ENST00000229340 Q6ZR54 194 aa10.2□□□□□ -0.78
RAB35-201ENST00000229340 A0A087X002 238 aa10.2□□□□□ -0.78
RAB35-201ENST00000229340 NOTCH2NLQ7Z3S9 236 aa10.2□□□□□ -0.78
RAB35-201ENST00000229340 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
RAB35-201ENST00000229340 ASB16-AS1Q495Z4 193 aa10.17□□□□□ -0.78
RAB35-201ENST00000229340 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
RAB35-201ENST00000229340 DNAH9Q9NYC9 4486 aa10.13□□□□□ -0.79
RAB35-201ENST00000229340 A0A1B0GVX0 72 aa10.12□□□□□ -0.79
RAB35-201ENST00000229340 MRPL34Q9BQ48 92 aaKnown RBP10.12□□□□□ -0.79
RAB35-201ENST00000229340 KRTAP24-1Q3LI83 254 aa10.11□□□□□ -0.79
RAB35-201ENST00000229340 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
RAB35-201ENST00000229340 Q5W150 140 aa10.1□□□□□ -0.79
RAB35-201ENST00000229340 PANO1I0J062 215 aa10.09□□□□□ -0.79
RAB35-201ENST00000229340 MDFIQ99750 246 aa10.09□□□□□ -0.79
RAB35-201ENST00000229340 STAB2Q8WWQ8 2551 aa10.09□□□□□ -0.79
RAB35-201ENST00000229340 ANAPC11Q9NYG5 84 aa10.08□□□□□ -0.8
RAB35-201ENST00000229340 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
RAB35-201ENST00000229340 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms