RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TLX1NBP0CAT3 122 aa11.26□□□□□ -0.61
CDKN1B-201ENST00000228872 DEFB116Q30KQ4 102 aa11.26□□□□□ -0.61
CDKN1B-201ENST00000228872 NBEAL1Q6ZS30 2694 aa11.26□□□□□ -0.61
CDKN1B-201ENST00000228872 H3BNG1 76 aa11.25□□□□□ -0.61
CDKN1B-201ENST00000228872 LINC00208Q96KT6 92 aa11.25□□□□□ -0.61
CDKN1B-201ENST00000228872 A0A0G2JQZ4 141 aa11.24□□□□□ -0.61
CDKN1B-201ENST00000228872 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
CDKN1B-201ENST00000228872 UBE2BP63146 152 aa11.23□□□□□ -0.61
CDKN1B-201ENST00000228872 KRTAP7-1Q8IUC3 87 aa11.23□□□□□ -0.61
CDKN1B-201ENST00000228872 LINC01556Q5JQF7 62 aa11.22□□□□□ -0.61
CDKN1B-201ENST00000228872 HUWE1Q7Z6Z7 4374 aaKnown RBP11.22□□□□□ -0.61
CDKN1B-201ENST00000228872 IGFL1Q6UW32 110 aa11.21□□□□□ -0.61
CDKN1B-201ENST00000228872 Q8N9P0 234 aaPredicted RBP11.21□□□□□ -0.61
CDKN1B-201ENST00000228872 SPANXA2-OT1Q8N9U9 137 aa11.21□□□□□ -0.61
CDKN1B-201ENST00000228872 C11orf45Q8TAV5 145 aa11.2□□□□□ -0.62
CDKN1B-201ENST00000228872 UBE2AP49459 152 aa11.19□□□□□ -0.62
CDKN1B-201ENST00000228872 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
CDKN1B-201ENST00000228872 CHKB-CPT1BH3BT56 60 aa11.19□□□□□ -0.62
CDKN1B-201ENST00000228872 CD164Q04900 197 aa11.18□□□□□ -0.62
CDKN1B-201ENST00000228872 H0Y9P7 68 aa11.18□□□□□ -0.62
CDKN1B-201ENST00000228872 LIMD2Q9BT23 127 aa11.18□□□□□ -0.62
CDKN1B-201ENST00000228872 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
CDKN1B-201ENST00000228872 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
CDKN1B-201ENST00000228872 A0A087WSZ3 146 aa11.16□□□□□ -0.62
CDKN1B-201ENST00000228872 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
CDKN1B-201ENST00000228872 H3BPC8 53 aa11.15□□□□□ -0.62
CDKN1B-201ENST00000228872 PRR15LQ9BU68 103 aa11.15□□□□□ -0.62
CDKN1B-201ENST00000228872 C16orf90A8MZG2 172 aa11.15□□□□□ -0.62
CDKN1B-201ENST00000228872 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
CDKN1B-201ENST00000228872 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
CDKN1B-201ENST00000228872 LINC00588Q9Y4M8 146 aa11.13□□□□□ -0.63
CDKN1B-201ENST00000228872 DNAH9Q9NYC9 4486 aa11.12□□□□□ -0.63
CDKN1B-201ENST00000228872 CASC2Q6XLA1 102 aa11.12□□□□□ -0.63
CDKN1B-201ENST00000228872 IGLV8-61A0A075B6I0 122 aa11.11□□□□□ -0.63
CDKN1B-201ENST00000228872 CASC10Q5T4H9 136 aa11.1□□□□□ -0.63
CDKN1B-201ENST00000228872 C9orf163Q8N9P6 203 aa11.1□□□□□ -0.63
CDKN1B-201ENST00000228872 CNBPP62633 177 aaKnown RBP11.09□□□□□ -0.63
CDKN1B-201ENST00000228872 KRTAP21-3Q3LHN1 58 aa11.09□□□□□ -0.63
CDKN1B-201ENST00000228872 KTN1-AS1Q86SY8 53 aa11.09□□□□□ -0.63
CDKN1B-201ENST00000228872 DNAH10OSP0CZ25 163 aa11.07□□□□□ -0.64
CDKN1B-201ENST00000228872 Q75L30 129 aa11.07□□□□□ -0.64
CDKN1B-201ENST00000228872 LCA10Q71F78 164 aa11.07□□□□□ -0.64
CDKN1B-201ENST00000228872 SPTSSBQ8NFR3 76 aa11.06□□□□□ -0.64
CDKN1B-201ENST00000228872 PRLHP81277 87 aa11.04□□□□□ -0.64
CDKN1B-201ENST00000228872 COA5Q86WW8 74 aa11.04□□□□□ -0.64
CDKN1B-201ENST00000228872 LOC101927531A0A1B0GV80 90 aa11.04□□□□□ -0.64
CDKN1B-201ENST00000228872 ATP11AUNQ6ZP68 121 aa11.03□□□□□ -0.64
CDKN1B-201ENST00000228872 COL7A1Q02388 2944 aa11.02□□□□□ -0.65
CDKN1B-201ENST00000228872 A6NED7 52 aa11.02□□□□□ -0.65
CDKN1B-201ENST00000228872 A8MWP4 228 aa11.02□□□□□ -0.65
CDKN1B-201ENST00000228872 DNHD1Q96M86 4753 aa11.01□□□□□ -0.65
CDKN1B-201ENST00000228872 IGLV7-46A0A075B6I9 117 aa10.99□□□□□ -0.65
CDKN1B-201ENST00000228872 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
CDKN1B-201ENST00000228872 LINC00472Q9H8W2 130 aa10.99□□□□□ -0.65
CDKN1B-201ENST00000228872 A6NN06 94 aa10.98□□□□□ -0.65
CDKN1B-201ENST00000228872 STAB2Q8WWQ8 2551 aa10.96□□□□□ -0.65
CDKN1B-201ENST00000228872 CDC42SE1Q9NRR8 79 aa10.95□□□□□ -0.66
CDKN1B-201ENST00000228872 NDUFS5O43920 106 aa10.94□□□□□ -0.66
CDKN1B-201ENST00000228872 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
CDKN1B-201ENST00000228872 DYNC2H1Q8NCM8 4307 aaKnown RBP10.94□□□□□ -0.66
CDKN1B-201ENST00000228872 PHF5AQ7RTV0 110 aaKnown RBP10.93□□□□□ -0.66
CDKN1B-201ENST00000228872 LYSTQ99698 3801 aa10.93□□□□□ -0.66
CDKN1B-201ENST00000228872 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
CDKN1B-201ENST00000228872 H0Y9J4 135 aa10.91□□□□□ -0.66
CDKN1B-201ENST00000228872 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
CDKN1B-201ENST00000228872 PRKDCP78527 4128 aaKnown RBP10.9□□□□□ -0.66
CDKN1B-201ENST00000228872 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.66
CDKN1B-201ENST00000228872 A0A096LNI7 61 aa10.9□□□□□ -0.67
CDKN1B-201ENST00000228872 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
CDKN1B-201ENST00000228872 SPRR1BP22528 89 aa10.89□□□□□ -0.67
CDKN1B-201ENST00000228872 IGKV2-24A0A0C4DH68 120 aa10.88□□□□□ -0.67
CDKN1B-201ENST00000228872 SPAG11AQ6PDA7 123 aa10.87□□□□□ -0.67
CDKN1B-201ENST00000228872 APLNQ9ULZ1 77 aa10.86□□□□□ -0.67
CDKN1B-201ENST00000228872 MOBPQ13875 183 aa10.85□□□□□ -0.67
CDKN1B-201ENST00000228872 NUPR2A6NF83 97 aa10.83□□□□□ -0.68
CDKN1B-201ENST00000228872 KRTAP11-1Q8IUC1 163 aa10.83□□□□□ -0.68
CDKN1B-201ENST00000228872 C7orf65Q6ZTY9 151 aa10.83□□□□□ -0.68
CDKN1B-201ENST00000228872 DNAH7Q8WXX0 4024 aa10.82□□□□□ -0.68
CDKN1B-201ENST00000228872 MEGF8Q7Z7M0 2845 aa10.81□□□□□ -0.68
CDKN1B-201ENST00000228872 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
CDKN1B-201ENST00000228872 TP53AIP1Q9HCN2 124 aa10.81□□□□□ -0.68
CDKN1B-201ENST00000228872 CSMD3Q7Z407 3707 aa10.8□□□□□ -0.68
CDKN1B-201ENST00000228872 TENM2Q9NT68 2774 aa10.8□□□□□ -0.68
CDKN1B-201ENST00000228872 SPINK7P58062 85 aa10.8□□□□□ -0.68
CDKN1B-201ENST00000228872 DNAH10Q8IVF4 4471 aa10.79□□□□□ -0.68
CDKN1B-201ENST00000228872 Q6ZR54 194 aa10.79□□□□□ -0.68
CDKN1B-201ENST00000228872 HRES1P13985 223 aa10.77□□□□□ -0.69
CDKN1B-201ENST00000228872 Q96NJ1 140 aa10.76□□□□□ -0.69
CDKN1B-201ENST00000228872 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
CDKN1B-201ENST00000228872 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
CDKN1B-201ENST00000228872 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
CDKN1B-201ENST00000228872 PLECQ15149 4684 aaKnown RBP10.74□□□□□ -0.69
CDKN1B-201ENST00000228872 CHTF8P0CG12 524 aa10.72□□□□□ -0.69
CDKN1B-201ENST00000228872 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
CDKN1B-201ENST00000228872 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
CDKN1B-201ENST00000228872 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
CDKN1B-201ENST00000228872 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
CDKN1B-201ENST00000228872 A0A1B0GVX0 72 aa10.64□□□□□ -0.71
CDKN1B-201ENST00000228872 IGLV9-49A0A0B4J1Y8 123 aa10.63□□□□□ -0.71
CDKN1B-201ENST00000228872 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms