RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 Q1T7F1 81 aa10.24□□□□□ -0.77
SF3A2-201ENST00000221494 DSCR10P59022 87 aa10.23□□□□□ -0.77
SF3A2-201ENST00000221494 NDUFB1O75438 58 aa10.23□□□□□ -0.77
SF3A2-201ENST00000221494 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
SF3A2-201ENST00000221494 MPLKIPQ8TAP9 179 aa10.22□□□□□ -0.77
SF3A2-201ENST00000221494 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.78
SF3A2-201ENST00000221494 HCG22E2RYF7 251 aa10.19□□□□□ -0.78
SF3A2-201ENST00000221494 NDUFS5O43920 106 aa10.19□□□□□ -0.78
SF3A2-201ENST00000221494 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
SF3A2-201ENST00000221494 K7EQZ3 153 aa10.16□□□□□ -0.78
SF3A2-201ENST00000221494 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
SF3A2-201ENST00000221494 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
SF3A2-201ENST00000221494 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
SF3A2-201ENST00000221494 ST20-AS1Q8NBB2 130 aa10.14□□□□□ -0.79
SF3A2-201ENST00000221494 H3BPC8 53 aa10.14□□□□□ -0.79
SF3A2-201ENST00000221494 LINC00588Q9Y4M8 146 aa10.13□□□□□ -0.79
SF3A2-201ENST00000221494 UBE2BP63146 152 aa10.12□□□□□ -0.79
SF3A2-201ENST00000221494 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
SF3A2-201ENST00000221494 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
SF3A2-201ENST00000221494 PSCAO43653 123 aa10.11□□□□□ -0.79
SF3A2-201ENST00000221494 MP68P56378 58 aa10.11□□□□□ -0.79
SF3A2-201ENST00000221494 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
SF3A2-201ENST00000221494 KRTAP7-1Q8IUC3 87 aa10.1□□□□□ -0.79
SF3A2-201ENST00000221494 FBN3Q75N90 2809 aa10.09□□□□□ -0.79
SF3A2-201ENST00000221494 FAM168BA1KXE4 195 aa10.09□□□□□ -0.79
SF3A2-201ENST00000221494 SPANXA2-OT1Q8N9U9 137 aa10.09□□□□□ -0.79
SF3A2-201ENST00000221494 APLNQ9ULZ1 77 aa10.07□□□□□ -0.8
SF3A2-201ENST00000221494 IGFL1Q6UW32 110 aa10.06□□□□□ -0.8
SF3A2-201ENST00000221494 PHF5AQ7RTV0 110 aaKnown RBP10.06□□□□□ -0.8
SF3A2-201ENST00000221494 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
SF3A2-201ENST00000221494 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
SF3A2-201ENST00000221494 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
SF3A2-201ENST00000221494 DNAH7Q8WXX0 4024 aa10.03□□□□□ -0.8
SF3A2-201ENST00000221494 NUPR2A6NF83 97 aa10.03□□□□□ -0.8
SF3A2-201ENST00000221494 PLECQ15149 4684 aaKnown RBP10.01□□□□□ -0.81
SF3A2-201ENST00000221494 TENM2Q9NT68 2774 aa10□□□□□ -0.81
SF3A2-201ENST00000221494 LCA10Q71F78 164 aa10□□□□□ -0.81
SF3A2-201ENST00000221494 LYSTQ99698 3801 aa9.99□□□□□ -0.81
SF3A2-201ENST00000221494 DNAH1Q9P2D7 4330 aa9.99□□□□□ -0.81
SF3A2-201ENST00000221494 SPRR1BP22528 89 aa9.99□□□□□ -0.81
SF3A2-201ENST00000221494 H0Y9J4 135 aa9.97□□□□□ -0.81
SF3A2-201ENST00000221494 A0A087WSZ3 146 aa9.97□□□□□ -0.81
SF3A2-201ENST00000221494 A8MUN3 132 aa9.97□□□□□ -0.81
SF3A2-201ENST00000221494 C16orf90A8MZG2 172 aa9.96□□□□□ -0.81
SF3A2-201ENST00000221494 CASC10Q5T4H9 136 aa9.96□□□□□ -0.81
SF3A2-201ENST00000221494 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.81
SF3A2-201ENST00000221494 LIMD2Q9BT23 127 aa9.96□□□□□ -0.81
SF3A2-201ENST00000221494 LINC00208Q96KT6 92 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 STARD9Q9P2P6 4700 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 A8MWP4 228 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 H0Y9P7 68 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 UBE2DNLQ8IWF7 75 aa9.95□□□□□ -0.82
SF3A2-201ENST00000221494 LRCOL1A6NCL2 159 aa9.94□□□□□ -0.82
SF3A2-201ENST00000221494 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
SF3A2-201ENST00000221494 KRTAP1-5Q9BYS1 174 aa9.94□□□□□ -0.82
SF3A2-201ENST00000221494 UBE2AP49459 152 aa9.93□□□□□ -0.82
SF3A2-201ENST00000221494 PSPHP1O15172 72 aa9.92□□□□□ -0.82
SF3A2-201ENST00000221494 C7orf65Q6ZTY9 151 aa9.92□□□□□ -0.82
SF3A2-201ENST00000221494 TGP01266 2768 aa9.91□□□□□ -0.82
SF3A2-201ENST00000221494 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
SF3A2-201ENST00000221494 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
SF3A2-201ENST00000221494 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
SF3A2-201ENST00000221494 PRLHP81277 87 aa9.88□□□□□ -0.83
SF3A2-201ENST00000221494 PRR4Q16378 134 aa9.88□□□□□ -0.83
SF3A2-201ENST00000221494 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
SF3A2-201ENST00000221494 A6NN06 94 aa9.88□□□□□ -0.83
SF3A2-201ENST00000221494 Q5VV11 94 aa9.88□□□□□ -0.83
SF3A2-201ENST00000221494 A0A096LNI7 61 aa9.87□□□□□ -0.83
SF3A2-201ENST00000221494 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
SF3A2-201ENST00000221494 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
SF3A2-201ENST00000221494 C14orf177Q52M58 125 aa9.85□□□□□ -0.83
SF3A2-201ENST00000221494 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
SF3A2-201ENST00000221494 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
SF3A2-201ENST00000221494 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
SF3A2-201ENST00000221494 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
SF3A2-201ENST00000221494 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
SF3A2-201ENST00000221494 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
SF3A2-201ENST00000221494 TP53AIP1Q9HCN2 124 aa9.83□□□□□ -0.84
SF3A2-201ENST00000221494 DNAH10Q8IVF4 4471 aa9.83□□□□□ -0.84
SF3A2-201ENST00000221494 LOC101927531A0A1B0GV80 90 aa9.81□□□□□ -0.84
SF3A2-201ENST00000221494 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
SF3A2-201ENST00000221494 Q75L30 129 aa9.81□□□□□ -0.84
SF3A2-201ENST00000221494 MOBPQ13875 183 aa9.79□□□□□ -0.84
SF3A2-201ENST00000221494 ASB16-AS1Q495Z4 193 aa9.79□□□□□ -0.84
SF3A2-201ENST00000221494 IGKV2-24A0A0C4DH68 120 aa9.78□□□□□ -0.84
SF3A2-201ENST00000221494 CHKB-CPT1BH3BT56 60 aa9.77□□□□□ -0.85
SF3A2-201ENST00000221494 Q6ZRN7 208 aaPredicted RBP9.76□□□□□ -0.85
SF3A2-201ENST00000221494 COA5Q86WW8 74 aa9.76□□□□□ -0.85
SF3A2-201ENST00000221494 LINC00313P59037 77 aa9.75□□□□□ -0.85
SF3A2-201ENST00000221494 PRR15LQ9BU68 103 aa9.75□□□□□ -0.85
SF3A2-201ENST00000221494 Q6ZR54 194 aa9.74□□□□□ -0.85
SF3A2-201ENST00000221494 KMT2AQ03164 3969 aa9.72□□□□□ -0.85
SF3A2-201ENST00000221494 A0A0A0MQY5 61 aa9.72□□□□□ -0.85
SF3A2-201ENST00000221494 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
SF3A2-201ENST00000221494 KRTAP13-1Q8IUC0 172 aa9.72□□□□□ -0.85
SF3A2-201ENST00000221494 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
SF3A2-201ENST00000221494 LY6G6CO95867 125 aa9.7□□□□□ -0.86
SF3A2-201ENST00000221494 KRTAP11-1Q8IUC1 163 aa9.7□□□□□ -0.86
SF3A2-201ENST00000221494 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms