RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
TM9SF4-201ENST00000217315 KLKP1Q107X0 134 aa7.89□□□□□ -1.15
TM9SF4-201ENST00000217315 H7BZZ5 65 aa7.88□□□□□ -1.15
TM9SF4-201ENST00000217315 C4orf26Q17RF5 130 aa7.88□□□□□ -1.15
TM9SF4-201ENST00000217315 H0Y9P7 68 aa7.88□□□□□ -1.15
TM9SF4-201ENST00000217315 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
TM9SF4-201ENST00000217315 APLNQ9ULZ1 77 aa7.87□□□□□ -1.15
TM9SF4-201ENST00000217315 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
TM9SF4-201ENST00000217315 MOBPQ13875 183 aa7.87□□□□□ -1.15
TM9SF4-201ENST00000217315 FBN1P35555 2871 aaKnown RBP7.85□□□□□ -1.15
TM9SF4-201ENST00000217315 RTL8CO15255 209 aa7.85□□□□□ -1.15
TM9SF4-201ENST00000217315 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
TM9SF4-201ENST00000217315 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
TM9SF4-201ENST00000217315 A0A0U1RQV1 116 aa7.84□□□□□ -1.15
TM9SF4-201ENST00000217315 KRTAP1-5Q9BYS1 174 aa7.84□□□□□ -1.15
TM9SF4-201ENST00000217315 SPRR1AP35321 89 aa7.81□□□□□ -1.16
TM9SF4-201ENST00000217315 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
TM9SF4-201ENST00000217315 ZFHX3Q15911 3703 aa7.81□□□□□ -1.16
TM9SF4-201ENST00000217315 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
TM9SF4-201ENST00000217315 hDV103S1A0JD37 113 aa7.8□□□□□ -1.16
TM9SF4-201ENST00000217315 PSPHP1O15172 72 aa7.79□□□□□ -1.16
TM9SF4-201ENST00000217315 A0A087WTM6 91 aa7.78□□□□□ -1.16
TM9SF4-201ENST00000217315 ANAPC11Q9NYG5 84 aa7.78□□□□□ -1.16
TM9SF4-201ENST00000217315 A8MWP4 228 aa7.77□□□□□ -1.17
TM9SF4-201ENST00000217315 OCR1Q9BZK8 76 aa7.77□□□□□ -1.17
TM9SF4-201ENST00000217315 DSCR10P59022 87 aa7.77□□□□□ -1.17
TM9SF4-201ENST00000217315 SPRR4Q96PI1 79 aa7.77□□□□□ -1.17
TM9SF4-201ENST00000217315 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
TM9SF4-201ENST00000217315 PKD1L1Q8TDX9 2849 aa7.75□□□□□ -1.17
TM9SF4-201ENST00000217315 TRAV22A0A0B4J277 110 aa7.74□□□□□ -1.17
TM9SF4-201ENST00000217315 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
TM9SF4-201ENST00000217315 V9GYY9 64 aa7.74□□□□□ -1.17
TM9SF4-201ENST00000217315 SVIPQ8NHG7 77 aa7.73□□□□□ -1.17
TM9SF4-201ENST00000217315 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
TM9SF4-201ENST00000217315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
TM9SF4-201ENST00000217315 KRTAP4-16G5E9R7 235 aaPredicted RBP7.72□□□□□ -1.17
TM9SF4-201ENST00000217315 PSORS1C2Q9UIG4 136 aa7.72□□□□□ -1.17
TM9SF4-201ENST00000217315 ZNF861PO60384 105 aa7.69□□□□□ -1.18
TM9SF4-201ENST00000217315 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
TM9SF4-201ENST00000217315 A6NED7 52 aa7.68□□□□□ -1.18
TM9SF4-201ENST00000217315 TNP2Q05952 138 aa7.68□□□□□ -1.18
TM9SF4-201ENST00000217315 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
TM9SF4-201ENST00000217315 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
TM9SF4-201ENST00000217315 H3BPC8 53 aa7.66□□□□□ -1.18
TM9SF4-201ENST00000217315 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.18
TM9SF4-201ENST00000217315 SPACA4Q8TDM5 124 aa7.65□□□□□ -1.19
TM9SF4-201ENST00000217315 TRRAPQ9Y4A5 3859 aa7.64□□□□□ -1.19
TM9SF4-201ENST00000217315 C8orf17Q9NRJ1 99 aa7.64□□□□□ -1.19
TM9SF4-201ENST00000217315 PRO0628Q9UI54 55 aa7.63□□□□□ -1.19
TM9SF4-201ENST00000217315 OXTP01178 125 aa7.63□□□□□ -1.19
TM9SF4-201ENST00000217315 PANO1I0J062 215 aa7.62□□□□□ -1.19
TM9SF4-201ENST00000217315 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
TM9SF4-201ENST00000217315 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
TM9SF4-201ENST00000217315 A0A1B0GVX0 72 aa7.61□□□□□ -1.19
TM9SF4-201ENST00000217315 WWC2-AS2Q96NR7 200 aa7.6□□□□□ -1.19
TM9SF4-201ENST00000217315 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
TM9SF4-201ENST00000217315 KRTAP11-1Q8IUC1 163 aa7.59□□□□□ -1.19
TM9SF4-201ENST00000217315 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
TM9SF4-201ENST00000217315 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
TM9SF4-201ENST00000217315 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
TM9SF4-201ENST00000217315 SPRR1BP22528 89 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 TENM2Q9NT68 2774 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 LINC00313P59037 77 aa7.57□□□□□ -1.2
TM9SF4-201ENST00000217315 A8MUN3 132 aa7.56□□□□□ -1.2
TM9SF4-201ENST00000217315 LIMD2Q9BT23 127 aa7.56□□□□□ -1.2
TM9SF4-201ENST00000217315 Q5XG85 94 aa7.55□□□□□ -1.2
TM9SF4-201ENST00000217315 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
TM9SF4-201ENST00000217315 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
TM9SF4-201ENST00000217315 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
TM9SF4-201ENST00000217315 COA5Q86WW8 74 aa7.53□□□□□ -1.2
TM9SF4-201ENST00000217315 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
TM9SF4-201ENST00000217315 FP248Q71RG6 208 aaPredicted RBP7.53□□□□□ -1.2
TM9SF4-201ENST00000217315 TYMSOSQ8TAI1 123 aa7.53□□□□□ -1.2
TM9SF4-201ENST00000217315 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
TM9SF4-201ENST00000217315 MMP24-AS1A0A0U1RRL7 71 aa7.51□□□□□ -1.21
TM9SF4-201ENST00000217315 SEC61GP60059 68 aa7.5□□□□□ -1.21
TM9SF4-201ENST00000217315 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
TM9SF4-201ENST00000217315 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
TM9SF4-201ENST00000217315 SPINK1P00995 79 aa7.5□□□□□ -1.21
TM9SF4-201ENST00000217315 C8orf87E5RJ46 101 aa7.48□□□□□ -1.21
TM9SF4-201ENST00000217315 ACYP2P14621 99 aa7.47□□□□□ -1.21
TM9SF4-201ENST00000217315 Q6ZRN7 208 aaPredicted RBP7.47□□□□□ -1.21
TM9SF4-201ENST00000217315 SPANXA2-OT1Q8N9U9 137 aa7.46□□□□□ -1.21
TM9SF4-201ENST00000217315 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
TM9SF4-201ENST00000217315 TGP01266 2768 aa7.45□□□□□ -1.22
TM9SF4-201ENST00000217315 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
TM9SF4-201ENST00000217315 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
TM9SF4-201ENST00000217315 Q96NJ1 140 aa7.44□□□□□ -1.22
TM9SF4-201ENST00000217315 KRTAP29-1A8MX34 341 aaPredicted RBP7.42□□□□□ -1.22
TM9SF4-201ENST00000217315 C7orf65Q6ZTY9 151 aa7.41□□□□□ -1.22
TM9SF4-201ENST00000217315 Q6ZR54 194 aa7.41□□□□□ -1.22
TM9SF4-201ENST00000217315 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
TM9SF4-201ENST00000217315 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-201ENST00000217315 IGLV7-46A0A075B6I9 117 aa7.37□□□□□ -1.23
TM9SF4-201ENST00000217315 A0A1B0GU69 56 aa7.37□□□□□ -1.23
TM9SF4-201ENST00000217315 Q1T7F1 81 aa7.37□□□□□ -1.23
TM9SF4-201ENST00000217315 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms