RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Nit2Q9JHW2 276 aa9.57□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-59A0A0B4J1I8 117 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 A0A1L1SR50 188 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Fer1l5P0DM40 2038 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Cox8bP48772 70 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Q91WE4 72 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-61A0A0G2JH00 117 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tmem190Q9D2E9 166 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv3-9A0A140T8P4 119 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Spata46Q4FZF2 204 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm16381A0A1Y7VKT9 73 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Isg15Q64339 161 aaKnown RBP9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Polr3kQ9CQZ7 108 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Rnf114Q9ET26 229 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Dpm2Q9Z324 84 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Brca1P48754 1812 aa9.56□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Brd3osA0A1B0GRB6 84 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 P01725 110 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm10384Q3UQ87 92 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Slc25a47Q6IS41 310 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Trav6d-7A0A075B6B0 112 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 E130218I03RikA0A0U1RNU5 63 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gata4Q08369 441 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Rhno1Q8K3A4 235 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Atp6v0bQ91V37 205 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Trav14d-3-dv8A0A075B619 120 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ly6c1P0CW02 131 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Chchd5Q9CQP3 110 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv6-23A0A140T8N5 115 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Defa27F2Z403 93 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Znrd1Q791N7 123 aa9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Taf15Q8BQ46 557 aaKnown RBP9.55□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tdgf1P51865 171 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Zfp36P22893 319 aaKnown RBP9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 MdfiP70331 251 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Fam110dQ80X91 271 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Msrb3Q8BU85 253 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 RtbdnQ8QZY4 247 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 OtosQ8R448 89 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Pygo1Q9D0P5 417 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Zfp646Q6NV66 1788 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ighv3-4A0A0A6YXF1 117 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-72A0A0B4J1I4 117 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-63A0A0G2JFU6 117 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 P01787 123 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tex26Q0VB26 296 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ang2Q64438 145 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Mapk1ip1lQ8BH93 242 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Pmaip1Q9JM54 103 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Frem3Q5H8B9 2123 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm10203F6QJ09 66 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm10762Q9CZN6 115 aa9.54□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Prdm6Q3UZD5 596 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Hist2h2beQ64524 126 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 EpopQ7TNS8 369 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Shisa9Q9CZN4 424 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 PmvkQ9D1G2 192 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tomm40Q9QYA2 361 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Plekhb2Q9QZC7 221 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Spta1P08032 2415 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Snrnp200Q6P4T2 2136 aaKnown RBP9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-54A0A0G2JES9 117 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Gm4744D3Z3S5 154 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Wt1P22561 449 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Tex48Q9DA81 110 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Reg3dQ9QUS9 175 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv19-93A0A0G2JFZ3 115 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ccl21aP84444 133 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ccl21bP86792 133 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Ccl21cP86793 133 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Znf740Q6NZQ6 180 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Fam216aQ9DB54 251 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Igkv4-81A0A0G2JEY5 119 aa9.53□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Zfp236S4R299 1847 aa9.52□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Hoxd3P09027 433 aa9.52□□□□□ -0.88
Scn8a-208ENSMUST00000200963 C330021F23RikQ8C7T0 141 aa9.52□□□□□ -0.88
Scn8a-208ENSMUST00000200963 Plxna1P70206 1894 aa9.52□□□□□ -0.89
Scn8a-208ENSMUST00000200963 3110082J24RikF6Z6Z2 108 aa9.52□□□□□ -0.89
Scn8a-208ENSMUST00000200963 LeprotO89013 131 aa9.52□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Ttc9cQ810A3 171 aa9.52□□□□□ -0.89
Scn8a-208ENSMUST00000200963 TdhQ8K3F7 373 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Gm12830F6XVH0 157 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Dad1P61804 113 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 F8Q06194 2319 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Ighv8-4A0A0A6YW26 117 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Gm16686Q3UMN9 131 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Zfp11P10751 647 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Prok1Q14A28 105 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 C1qtnf5Q8K479 243 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Ralgapa2A3KGS3 1872 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Ighv1-39A0A075B5V5 117 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 KprpB2RUR4 657 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Cela2aP05208 271 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Loxhd1C8YR32 2068 aa9.51□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Gm10604Q3V0X7 143 aa9.5□□□□□ -0.89
Scn8a-208ENSMUST00000200963 MplkipQ9D011 178 aa9.5□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Cend1Q9JKC6 149 aa9.5□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Trav3-4A0A075B654 114 aa9.5□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Gm2174F6ZVF2 133 aa9.5□□□□□ -0.89
Scn8a-208ENSMUST00000200963 Pde6hP61249 83 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms