RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
PHGDH-213ENST00000641272 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-213ENST00000641272 SLC25A20O43772 301 aa9.28□□□□□ -0.92
PHGDH-213ENST00000641272 IGKCP01834 107 aa9.28□□□□□ -0.92
PHGDH-213ENST00000641272 RPS29P62273 56 aaKnown RBP9.28□□□□□ -0.92
PHGDH-213ENST00000641272 NMUP48645 174 aa9.27□□□□□ -0.93
PHGDH-213ENST00000641272 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-213ENST00000641272 NDUFC2O95298 119 aa9.26□□□□□ -0.93
PHGDH-213ENST00000641272 HSPB8Q9UJY1 196 aa9.26□□□□□ -0.93
PHGDH-213ENST00000641272 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-213ENST00000641272 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
PHGDH-213ENST00000641272 XP32Q5T750 250 aa9.25□□□□□ -0.93
PHGDH-213ENST00000641272 A0A0J9YXY3 114 aa9.24□□□□□ -0.93
PHGDH-213ENST00000641272 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
PHGDH-213ENST00000641272 E9PLD3 99 aa9.19□□□□□ -0.94
PHGDH-213ENST00000641272 OR13C6PQ8NH95 151 aa9.19□□□□□ -0.94
PHGDH-213ENST00000641272 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
PHGDH-213ENST00000641272 HINT1P49773 126 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-213ENST00000641272 LINC00308Q8TCZ7 52 aa9.16□□□□□ -0.94
PHGDH-213ENST00000641272 LITAFQ99732 161 aa9.16□□□□□ -0.94
PHGDH-213ENST00000641272 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
PHGDH-213ENST00000641272 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
PHGDH-213ENST00000641272 TTTY13Q9BZ97 58 aa9.14□□□□□ -0.95
PHGDH-213ENST00000641272 SPRR1BP22528 89 aa9.13□□□□□ -0.95
PHGDH-213ENST00000641272 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
PHGDH-213ENST00000641272 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
PHGDH-213ENST00000641272 COLCA2A8K830 154 aa9.12□□□□□ -0.95
PHGDH-213ENST00000641272 Q1RN00 199 aa9.12□□□□□ -0.95
PHGDH-213ENST00000641272 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
PHGDH-213ENST00000641272 CBY1Q9Y3M2 126 aa9.12□□□□□ -0.95
PHGDH-213ENST00000641272 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
PHGDH-213ENST00000641272 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
PHGDH-213ENST00000641272 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
PHGDH-213ENST00000641272 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
PHGDH-213ENST00000641272 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 C5orf52A6NGY3 159 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 H7C2G1 150 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 COX7BP24311 80 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 C6orf99Q4VX62 202 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
PHGDH-213ENST00000641272 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
PHGDH-213ENST00000641272 TIMM17BO60830 172 aa9.09□□□□□ -0.95
PHGDH-213ENST00000641272 ELOF1P60002 83 aaKnown RBP9.09□□□□□ -0.95
PHGDH-213ENST00000641272 TAL2Q16559 108 aa9.07□□□□□ -0.96
PHGDH-213ENST00000641272 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
PHGDH-213ENST00000641272 LINC01545Q5VT33 79 aa9.06□□□□□ -0.96
PHGDH-213ENST00000641272 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 MT1HP80294 61 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
PHGDH-213ENST00000641272 PET117Q6UWS5 81 aa9.02□□□□□ -0.97
PHGDH-213ENST00000641272 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
PHGDH-213ENST00000641272 CRCT1Q9UGL9 99 aa9.02□□□□□ -0.97
PHGDH-213ENST00000641272 TEX49A0A1B0GTD5 131 aa9.01□□□□□ -0.97
PHGDH-213ENST00000641272 C3orf79P0CE67 100 aa9.01□□□□□ -0.97
PHGDH-213ENST00000641272 LINC00518Q8N0U6 118 aa9.01□□□□□ -0.97
PHGDH-213ENST00000641272 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
PHGDH-213ENST00000641272 SMIM29Q86T20 159 aa9□□□□□ -0.97
PHGDH-213ENST00000641272 KRTDAPP60985 99 aa8.99□□□□□ -0.97
PHGDH-213ENST00000641272 CD164Q04900 197 aa8.99□□□□□ -0.97
PHGDH-213ENST00000641272 A6NDN8 102 aa8.98□□□□□ -0.97
PHGDH-213ENST00000641272 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
PHGDH-213ENST00000641272 ANKRD39Q53RE8 183 aa8.97□□□□□ -0.97
PHGDH-213ENST00000641272 C1orf195Q5TG92 126 aa8.97□□□□□ -0.97
PHGDH-213ENST00000641272 AKR1D1P51857 326 aa8.96□□□□□ -0.98
PHGDH-213ENST00000641272 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
PHGDH-213ENST00000641272 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
PHGDH-213ENST00000641272 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
PHGDH-213ENST00000641272 CFC1BP0CG36 223 aa8.94□□□□□ -0.98
PHGDH-213ENST00000641272 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
PHGDH-213ENST00000641272 S100A1P23297 94 aa8.92□□□□□ -0.98
PHGDH-213ENST00000641272 Q5XG85 94 aa8.92□□□□□ -0.98
PHGDH-213ENST00000641272 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
PHGDH-213ENST00000641272 IFITM1P13164 125 aa8.91□□□□□ -0.98
PHGDH-213ENST00000641272 PCP2Q8IVA1 136 aa8.91□□□□□ -0.98
PHGDH-213ENST00000641272 C20orf202A1L168 122 aa8.9□□□□□ -0.98
PHGDH-213ENST00000641272 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-213ENST00000641272 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
PHGDH-213ENST00000641272 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
PHGDH-213ENST00000641272 M0R2T5 61 aa8.89□□□□□ -0.99
PHGDH-213ENST00000641272 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
PHGDH-213ENST00000641272 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
PHGDH-213ENST00000641272 NHP2Q9NX24 153 aaKnown RBP8.86□□□□□ -0.99
PHGDH-213ENST00000641272 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
PHGDH-213ENST00000641272 A4D1N5 150 aa8.85□□□□□ -0.99
PHGDH-213ENST00000641272 F8WEM9 126 aa8.85□□□□□ -0.99
PHGDH-213ENST00000641272 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
PHGDH-213ENST00000641272 Q6ZVH6 145 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms