RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 SCN11AQ9UI33 1791 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 MYH7P12883 1935 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 KIF20BQ96Q89 1820 aa-0.66□□□□□ -2.52
AP3S1-209ENST00000640413 ABCA6Q8N139 1617 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 PREX1Q8TCU6 1659 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 LMO7Q8WWI1 1683 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 CPSF4LA6NMK7 179 aaKnown RBP-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 UQCR11O14957 56 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 SSSCA1O60232 199 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 TPPP2P59282 170 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 COPZ1P61923 177 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 ALX1Q15699 326 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 DEFB121Q5J5C9 76 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 Q6AWC8 147 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 AKAP14Q86UN6 197 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 TTC9CQ8N5M4 171 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 TCEAL4Q96EI5 215 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 NAA60Q9H7X0 242 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 LENEPQ9Y5L5 61 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 ANKRD50Q9ULJ7 1429 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 GLI2P10070 1586 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 CCDC180Q9P1Z9 1646 aa-0.67□□□□□ -2.52
AP3S1-209ENST00000640413 ALS2Q96Q42 1657 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 F8VRH5 84 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 ARPC5O15511 151 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 SMCO1Q147U7 214 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 NWD1Q149M9 1564 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 DEFB136Q30KP8 78 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 H1FX-AS1Q4G0G2 97 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 BAGE2Q86Y30 109 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 VPS8Q8N3P4 1428 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 Q8N8P6 123 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 AMELXQ99217 191 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 NDUFA4L2Q9NRX3 87 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 NESP48681 1621 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 CCDC141Q6ZP82 1450 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 FOCADQ5VW36 1801 aa-0.68□□□□□ -2.52
AP3S1-209ENST00000640413 NHSQ6T4R5 1651 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 ERICH3Q5RHP9 1530 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 RICTORQ6R327 1708 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 DIP2BQ9P265 1576 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 H3BNG1 76 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 CLPSL2Q6UWE3 100 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 TMEM191AQ9H0A3 160 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 ADCY10Q96PN6 1610 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 MAGI1Q96QZ7 1491 aaPredicted RBP-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 MLH3Q9UHC1 1453 aa-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 DDX60Q8IY21 1712 aaKnown RBP-0.69□□□□□ -2.52
AP3S1-209ENST00000640413 ABCA8O94911 1581 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 TRBV7-3A0A075B6L6 115 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 C9orf92A6NGG3 77 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 RPS25P62851 125 aaKnown RBP-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 DEFB110Q30KQ9 67 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 TMEM263Q8WUH6 116 aaKnown RBP-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 PDCD10Q9BUL8 212 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 CRIPTQ9P021 101 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 GRIN2AQ12879 1464 aa-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 DDX60LQ5H9U9 1706 aaKnown RBP-0.7□□□□□ -2.52
AP3S1-209ENST00000640413 SCN7AQ01118 1682 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 CFAP43Q8NDM7 1665 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 FAM208AQ9UK61 1670 aaKnown RBP-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 MYH4Q9Y623 1939 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 LOC285095A0A1B0GVY8 99 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 MGPP08493 103 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 UBE2D3P61077 147 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 UBE2D2P62837 147 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 DR1Q01658 176 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 C10orf113Q5VZT2 155 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 COPS9Q8WXC6 57 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 CCDC167Q9P0B6 97 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 LINC01558Q9Y6Z2 57 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 KDM5DQ9BY66 1539 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 RB1CC1Q8TDY2 1594 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 KIF21BO75037 1637 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 MYO3AQ8NEV4 1616 aa-0.71□□□□□ -2.52
AP3S1-209ENST00000640413 ANKRD36A6QL64 1941 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 EEA1Q15075 1411 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 KIAA1551Q9HCM1 1747 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 MYO5CQ9NQX4 1742 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 A0A087WVE0 104 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 IGLC7A0M8Q6 106 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 SFT2D2O95562 160 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 HIST1H1DP16402 221 aaKnown RBP-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 BTG2P78543 158 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 WHAMMP3Q1A5X7 153 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 SMIM21Q3B7S5 101 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 C12orf73Q69YU5 71 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 ANP32BQ92688 251 aaKnown RBP-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 MGST2Q99735 147 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 DYNLRB1Q9NP97 96 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 FAIMQ9NVQ4 179 aa-0.72□□□□□ -2.52
AP3S1-209ENST00000640413 TCHHQ07283 1943 aa-0.72□□□□□ -2.53
AP3S1-209ENST00000640413 ABCC10Q5T3U5 1492 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 RALGAPBQ86X10 1494 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 MAP3K1Q13233 1512 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 TOP2BQ02880 1626 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 LINC01546A6NGU7 62 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 I3L3M4 83 aa-0.73□□□□□ -2.53
AP3S1-209ENST00000640413 CCL22O00626 93 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms