RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 NAV3Q8IVL0 2385 aa7.34□□□□□ -1.23
KCNMA1-259ENST00000639406 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
KCNMA1-259ENST00000639406 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
KCNMA1-259ENST00000639406 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
KCNMA1-259ENST00000639406 LUZP6Q538Z0 58 aa7.32□□□□□ -1.24
KCNMA1-259ENST00000639406 SETD2Q9BYW2 2564 aaPredicted RBP7.32□□□□□ -1.24
KCNMA1-259ENST00000639406 LRP4O75096 1905 aa7.32□□□□□ -1.24
KCNMA1-259ENST00000639406 GVQW2A0A096LPI5 108 aaPredicted RBP7.32□□□□□ -1.24
KCNMA1-259ENST00000639406 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
KCNMA1-259ENST00000639406 PHF5AQ7RTV0 110 aaKnown RBP7.31□□□□□ -1.24
KCNMA1-259ENST00000639406 CPAMD8Q8IZJ3 1885 aa7.31□□□□□ -1.24
KCNMA1-259ENST00000639406 KRTAP24-1Q3LI83 254 aa7.31□□□□□ -1.24
KCNMA1-259ENST00000639406 Q96NJ1 140 aa7.3□□□□□ -1.24
KCNMA1-259ENST00000639406 RAI1Q7Z5J4 1906 aaPredicted RBP7.3□□□□□ -1.24
KCNMA1-259ENST00000639406 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
KCNMA1-259ENST00000639406 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
KCNMA1-259ENST00000639406 DMXL2Q8TDJ6 3036 aa7.3□□□□□ -1.24
KCNMA1-259ENST00000639406 NCOR2Q9Y618 2525 aa7.29□□□□□ -1.24
KCNMA1-259ENST00000639406 ADAMTS20P59510 1910 aa7.29□□□□□ -1.24
KCNMA1-259ENST00000639406 LAMA5O15230 3695 aa7.29□□□□□ -1.24
KCNMA1-259ENST00000639406 TET2Q6N021 2002 aaPredicted RBP7.28□□□□□ -1.24
KCNMA1-259ENST00000639406 WNK1Q9H4A3 2382 aa7.28□□□□□ -1.24
KCNMA1-259ENST00000639406 PTPRBP23467 1997 aa7.28□□□□□ -1.24
KCNMA1-259ENST00000639406 ACACBO00763 2458 aa7.28□□□□□ -1.24
KCNMA1-259ENST00000639406 Q6ZRP5 223 aa7.28□□□□□ -1.24
KCNMA1-259ENST00000639406 OCR1Q9BZK8 76 aa7.27□□□□□ -1.24
KCNMA1-259ENST00000639406 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
KCNMA1-259ENST00000639406 OBSCN-AS1Q96MR7 158 aa7.27□□□□□ -1.25
KCNMA1-259ENST00000639406 IGF2RP11717 2491 aa7.26□□□□□ -1.25
KCNMA1-259ENST00000639406 CACNA1AO00555 2505 aa7.26□□□□□ -1.25
KCNMA1-259ENST00000639406 KCNQ1DNQ9H478 68 aa7.26□□□□□ -1.25
KCNMA1-259ENST00000639406 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 Q8N377 158 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 PTPN13Q12923 2485 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 CHD8Q9HCK8 2581 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 IGLV1-50A0A075B6I6 118 aa7.25□□□□□ -1.25
KCNMA1-259ENST00000639406 DSCR10P59022 87 aa7.24□□□□□ -1.25
KCNMA1-259ENST00000639406 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
KCNMA1-259ENST00000639406 LINC00588Q9Y4M8 146 aa7.24□□□□□ -1.25
KCNMA1-259ENST00000639406 SONP18583 2426 aaKnown RBP7.23□□□□□ -1.25
KCNMA1-259ENST00000639406 TLN1Q9Y490 2541 aaKnown RBP7.23□□□□□ -1.25
KCNMA1-259ENST00000639406 CHTF8P0CG12 524 aa7.23□□□□□ -1.25
KCNMA1-259ENST00000639406 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
KCNMA1-259ENST00000639406 KALRNO60229 2985 aa7.22□□□□□ -1.25
KCNMA1-259ENST00000639406 CSPG4Q6UVK1 2322 aa7.22□□□□□ -1.25
KCNMA1-259ENST00000639406 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
KCNMA1-259ENST00000639406 Q5VV11 94 aa7.22□□□□□ -1.25
KCNMA1-259ENST00000639406 A0A0D9SG42 100 aa7.21□□□□□ -1.26
KCNMA1-259ENST00000639406 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.26
KCNMA1-259ENST00000639406 ADGRG4Q8IZF6 3080 aa7.21□□□□□ -1.26
KCNMA1-259ENST00000639406 A0A0G2JQZ4 141 aa7.21□□□□□ -1.26
KCNMA1-259ENST00000639406 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
KCNMA1-259ENST00000639406 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
KCNMA1-259ENST00000639406 DMXL1Q9Y485 3027 aa7.2□□□□□ -1.26
KCNMA1-259ENST00000639406 LINC01558Q9Y6Z2 57 aa7.2□□□□□ -1.26
KCNMA1-259ENST00000639406 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
KCNMA1-259ENST00000639406 TLN2Q9Y4G6 2542 aa7.2□□□□□ -1.26
KCNMA1-259ENST00000639406 OXTP01178 125 aa7.19□□□□□ -1.26
KCNMA1-259ENST00000639406 MYO18BQ8IUG5 2567 aa7.19□□□□□ -1.26
KCNMA1-259ENST00000639406 C2CD3Q4AC94 2353 aa7.19□□□□□ -1.26
KCNMA1-259ENST00000639406 SPTBN4Q9H254 2564 aa7.18□□□□□ -1.26
KCNMA1-259ENST00000639406 IGLV7-46A0A075B6I9 117 aa7.18□□□□□ -1.26
KCNMA1-259ENST00000639406 CENPEQ02224 2701 aa7.18□□□□□ -1.26
KCNMA1-259ENST00000639406 A0A1W2PNM2 257 aa7.17□□□□□ -1.26
KCNMA1-259ENST00000639406 TACC2O95359 2948 aa7.17□□□□□ -1.26
KCNMA1-259ENST00000639406 H3BNG1 76 aa7.16□□□□□ -1.26
KCNMA1-259ENST00000639406 ZZEF1O43149 2961 aa7.16□□□□□ -1.26
KCNMA1-259ENST00000639406 TYMSOSQ8TAI1 123 aa7.15□□□□□ -1.27
KCNMA1-259ENST00000639406 DMAC1Q96GE9 116 aa7.15□□□□□ -1.27
KCNMA1-259ENST00000639406 ANKRD11Q6UB99 2663 aaPredicted RBP7.14□□□□□ -1.27
KCNMA1-259ENST00000639406 CUBNO60494 3623 aa7.14□□□□□ -1.27
KCNMA1-259ENST00000639406 MYO9AB2RTY4 2548 aa7.13□□□□□ -1.27
KCNMA1-259ENST00000639406 MUC4Q99102 2169 aa7.13□□□□□ -1.27
KCNMA1-259ENST00000639406 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
KCNMA1-259ENST00000639406 SMG1Q96Q15 3661 aaKnown RBP7.13□□□□□ -1.27
KCNMA1-259ENST00000639406 ABCA2Q9BZC7 2435 aa7.12□□□□□ -1.27
KCNMA1-259ENST00000639406 C15orf56Q8N910 161 aa7.11□□□□□ -1.27
KCNMA1-259ENST00000639406 SPINK7P58062 85 aa7.11□□□□□ -1.27
KCNMA1-259ENST00000639406 CCDC168Q8NDH2 2452 aa7.11□□□□□ -1.27
KCNMA1-259ENST00000639406 SPENQ96T58 3664 aaKnown RBP7.11□□□□□ -1.27
KCNMA1-259ENST00000639406 Q8N1X5 172 aa7.1□□□□□ -1.27
KCNMA1-259ENST00000639406 ZFYVE26Q68DK2 2539 aa7.09□□□□□ -1.27
KCNMA1-259ENST00000639406 A0A1W2PPR1 153 aa7.09□□□□□ -1.28
KCNMA1-259ENST00000639406 IGLV5-48A0A075B6I7 105 aa7.08□□□□□ -1.28
KCNMA1-259ENST00000639406 A0A1B0GU33 70 aa7.08□□□□□ -1.28
KCNMA1-259ENST00000639406 ANKHD1Q8IWZ3 2542 aaKnown RBP7.08□□□□□ -1.28
KCNMA1-259ENST00000639406 USP9YO00507 2555 aaPredicted RBP7.07□□□□□ -1.28
KCNMA1-259ENST00000639406 RTL8CO15255 209 aa7.07□□□□□ -1.28
KCNMA1-259ENST00000639406 RELNP78509 3460 aa7.07□□□□□ -1.28
KCNMA1-259ENST00000639406 POLQO75417 2590 aa7.06□□□□□ -1.28
KCNMA1-259ENST00000639406 KLK9Q2XQG4 91 aa7.05□□□□□ -1.28
KCNMA1-259ENST00000639406 NAV2Q8IVL1 2488 aa7.05□□□□□ -1.28
KCNMA1-259ENST00000639406 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
KCNMA1-259ENST00000639406 C10orf142B7Z368 130 aa7.05□□□□□ -1.28
KCNMA1-259ENST00000639406 ASH1LQ9NR48 2969 aaKnown RBP7.05□□□□□ -1.28
KCNMA1-259ENST00000639406 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
KCNMA1-259ENST00000639406 Q8NAQ8 132 aa7.03□□□□□ -1.28
KCNMA1-259ENST00000639406 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms