RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394		Q8N9W7	124 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	ITPR2	Q14571	2701 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	REG3A	Q06141	175 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	CSAG1	Q6PB30	78 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	ST20-AS1	Q8NBB2	130 aa		7.17	□□□□□ -1.26
PAX6-256	ENST00000639394	SVEP1	Q4LDE5	3571 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394	IGLV7-46	A0A075B6I9	117 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394	IGHV4-30-4	P0DP06	118 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394	COX17	Q14061	63 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394	DEFB112	Q30KQ8	113 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394		Q6ZQY7	126 aa		7.16	□□□□□ -1.26
PAX6-256	ENST00000639394	ZNF469	Q96JG9	3925 aa	Predicted RBP	7.16	□□□□□ -1.26
PAX6-256	ENST00000639394		A6NDX4	124 aa		7.15	□□□□□ -1.26
PAX6-256	ENST00000639394		H3BUX3	64 aa		7.15	□□□□□ -1.26
PAX6-256	ENST00000639394	ABCA1	O95477	2261 aa		7.15	□□□□□ -1.26
PAX6-256	ENST00000639394	CREBBP	Q92793	2442 aa		7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	ITPR3	Q14573	2671 aa		7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	MAP1A	P78559	2803 aa	Predicted RBP	7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	TRGV4	A0A0C4DH28	118 aa		7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	PRB2	P02812	416 aa	Predicted RBP	7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	KPRP	Q5T749	579 aa	Predicted RBP	7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	C5orf56	Q8N8D9	126 aa		7.15	□□□□□ -1.27
PAX6-256	ENST00000639394	CCDC168	Q8NDH2	2452 aa		7.14	□□□□□ -1.27
PAX6-256	ENST00000639394	LY6E	Q16553	131 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394	C9orf163	Q8N9P6	203 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394		Q6YL49	198 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394	TOMM7	Q9P0U1	55 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394	ZAN	Q9Y493	2812 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394	CELSR1	Q9NYQ6	3014 aa		7.13	□□□□□ -1.27
PAX6-256	ENST00000639394		Q6ZR54	194 aa		7.12	□□□□□ -1.27
PAX6-256	ENST00000639394	CSPG4	Q6UVK1	2322 aa		7.11	□□□□□ -1.27
PAX6-256	ENST00000639394	FLNA	P21333	2647 aa	Known RBP	7.1	□□□□□ -1.27
PAX6-256	ENST00000639394	KRTAP16-1	A8MUX0	517 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	SMR3A	Q99954	134 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	TEX15	Q9BXT5	2789 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	MIR22HG	Q0VDD5	57 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	SPATA8	Q6RVD6	105 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	REG3G	Q6UW15	175 aa		7.09	□□□□□ -1.27
PAX6-256	ENST00000639394	MYO9A	B2RTY4	2548 aa		7.08	□□□□□ -1.28
PAX6-256	ENST00000639394	LINC00959	A0A1B0GUT2	108 aa		7.08	□□□□□ -1.28
PAX6-256	ENST00000639394		G3V318	75 aa		7.08	□□□□□ -1.28
PAX6-256	ENST00000639394	CDK2AP2	O75956	126 aa		7.08	□□□□□ -1.28
PAX6-256	ENST00000639394	ANK3	Q12955	4377 aa	Known RBP	7.07	□□□□□ -1.28
PAX6-256	ENST00000639394	IGHV3-74	A0A0B4J1X5	117 aa		7.07	□□□□□ -1.28
PAX6-256	ENST00000639394	SEC61B	P60468	96 aa	Known RBP	7.07	□□□□□ -1.28
PAX6-256	ENST00000639394		Q8IZM0	81 aa		7.06	□□□□□ -1.28
PAX6-256	ENST00000639394	KLK12	Q9UKR0	248 aa		7.06	□□□□□ -1.28
PAX6-256	ENST00000639394	OTOG	Q6ZRI0	2925 aa		7.06	□□□□□ -1.28
PAX6-256	ENST00000639394	NOTCH2	Q04721	2471 aa		7.05	□□□□□ -1.28
PAX6-256	ENST00000639394	IGLV6-57	P01721	117 aa		7.05	□□□□□ -1.28
PAX6-256	ENST00000639394	ACAN	P16112	2415 aa		7.05	□□□□□ -1.28
PAX6-256	ENST00000639394	DNAJC9-AS1	A6NH13	148 aa		7.04	□□□□□ -1.28
PAX6-256	ENST00000639394	TLN2	Q9Y4G6	2542 aa		7.03	□□□□□ -1.28
PAX6-256	ENST00000639394		H3BUA1	57 aa		7.03	□□□□□ -1.28
PAX6-256	ENST00000639394		Q8NDZ9	215 aa		7.03	□□□□□ -1.28
PAX6-256	ENST00000639394	IGLV1-40	P01703	118 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	MXRA5	Q9NR99	2828 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	IGKV2D-24	A0A075B6R9	120 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	CYSRT1	A8MQ03	144 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	INAFM1	C9JVW0	142 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	IGHV3-11	P01762	117 aa		7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	SON	P18583	2426 aa	Known RBP	7.02	□□□□□ -1.29
PAX6-256	ENST00000639394	PROK1	P58294	105 aa		7.01	□□□□□ -1.29
PAX6-256	ENST00000639394	DSCR10	P59022	87 aa		7.01	□□□□□ -1.29
PAX6-256	ENST00000639394	BAHCC1	Q9P281	2608 aa		7	□□□□□ -1.29
PAX6-256	ENST00000639394	USMG5	Q96IX5	58 aa		7	□□□□□ -1.29
PAX6-256	ENST00000639394	IGLV5-48	A0A075B6I7	105 aa		6.99	□□□□□ -1.29
PAX6-256	ENST00000639394	IGHV4-28	A0A0C4DH34	117 aa		6.99	□□□□□ -1.29
PAX6-256	ENST00000639394	C10orf99	Q6UWK7	81 aa		6.99	□□□□□ -1.29
PAX6-256	ENST00000639394	HIVEP2	P31629	2446 aa		6.99	□□□□□ -1.29
PAX6-256	ENST00000639394	FLNB	O75369	2602 aa	Known RBP	6.99	□□□□□ -1.29
PAX6-256	ENST00000639394		Q6ZSN1	163 aa		6.99	□□□□□ -1.29
PAX6-256	ENST00000639394	SORL1	Q92673	2214 aa		6.98	□□□□□ -1.29
PAX6-256	ENST00000639394	KRTAP25-1	Q3LHN0	102 aa		6.98	□□□□□ -1.29
PAX6-256	ENST00000639394	SPRR4	Q96PI1	79 aa		6.98	□□□□□ -1.29
PAX6-256	ENST00000639394	DEFB1	P60022	68 aa		6.97	□□□□□ -1.29
PAX6-256	ENST00000639394	HIVEP1	P15822	2718 aa		6.97	□□□□□ -1.29
PAX6-256	ENST00000639394		A0A087WSZ3	146 aa		6.97	□□□□□ -1.29
PAX6-256	ENST00000639394		K7EQZ3	153 aa		6.96	□□□□□ -1.3
PAX6-256	ENST00000639394	IGLV1-50	A0A075B6I6	118 aa		6.95	□□□□□ -1.3
PAX6-256	ENST00000639394	CUBN	O60494	3623 aa		6.95	□□□□□ -1.3
PAX6-256	ENST00000639394	DEFB131B	A0A096LNP1	70 aa		6.95	□□□□□ -1.3
PAX6-256	ENST00000639394	UQCR11	O14957	56 aa		6.95	□□□□□ -1.3
PAX6-256	ENST00000639394	IGKV3-20	P01619	116 aa		6.95	□□□□□ -1.3
PAX6-256	ENST00000639394	FN1	P02751	2386 aa	Known RBP	6.93	□□□□□ -1.3
PAX6-256	ENST00000639394	MTOR	P42345	2549 aa		6.93	□□□□□ -1.3
PAX6-256	ENST00000639394	RHPN1-AS1	Q9BWJ2	59 aa		6.93	□□□□□ -1.3
PAX6-256	ENST00000639394		Q8NBF4	154 aa		6.92	□□□□□ -1.3
PAX6-256	ENST00000639394	IGLV5-37	A0A075B6J1	123 aa		6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	PRR34	Q9NV39	138 aa		6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	NSD1	Q96L73	2696 aa	Predicted RBP	6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.91	□□□□□ -1.3
PAX6-256	ENST00000639394		P0C880	135 aa		6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	C4orf3	Q8WVX3	66 aa		6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	F8	P00451	2351 aa		6.91	□□□□□ -1.3
PAX6-256	ENST00000639394	ZNF861P	O60384	105 aa		6.9	□□□□□ -1.3
PAX6-256	ENST00000639394	SPINK13	Q1W4C9	94 aa		6.9	□□□□□ -1.3
PAX6-256	ENST00000639394	C1orf137	Q5JT78	98 aa		6.9	□□□□□ -1.3
PAX6-256	ENST00000639394	SETX	Q7Z333	2677 aa	Known RBP	6.9	□□□□□ -1.31
PAX6-256	ENST00000639394		A8MTW9	85 aa		6.89	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms