RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CEND1Q8N111 149 aa4.19□□□□□ -1.74
UPF3B-205ENST00000636792 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
UPF3B-205ENST00000636792 H0Y9J4 135 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 DDTP30046 118 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 LINC00167Q96N53 147 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 DYNC1H1Q14204 4646 aaKnown RBP4.18□□□□□ -1.74
UPF3B-205ENST00000636792 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
UPF3B-205ENST00000636792 IGKV2-28A0A075B6P5 120 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 A4D1N5 150 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 NCR3O14931 201 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 IGKV2D-28P01615 120 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 SPRR1AP35321 89 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 NPC2P61916 151 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
UPF3B-205ENST00000636792 PHF5AQ7RTV0 110 aaKnown RBP4.17□□□□□ -1.74
UPF3B-205ENST00000636792 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 Q8NDZ9 215 aa4.17□□□□□ -1.74
UPF3B-205ENST00000636792 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 TRAV23DV6A0A075B6W5 121 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 TRBV7-6A0A0J9YX20 115 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 HINT1P49773 126 aaPredicted RBP4.16□□□□□ -1.74
UPF3B-205ENST00000636792 RPL37AP61513 92 aaKnown RBP4.16□□□□□ -1.74
UPF3B-205ENST00000636792 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
UPF3B-205ENST00000636792 BCE1O60756 84 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 RPL28P46779 137 aaKnown RBP4.15□□□□□ -1.75
UPF3B-205ENST00000636792 DIRC1Q969H9 104 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 RAB37Q96AX2 223 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 PRO1933Q9H354 126 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 PSORS1C2Q9UIG4 136 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
UPF3B-205ENST00000636792 RYR1P21817 5038 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 A6NDN8 102 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 GAGE10A6NGK3 116 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 KRTAP4-16G5E9R7 235 aaPredicted RBP4.14□□□□□ -1.75
UPF3B-205ENST00000636792 ZNF73O43830 326 aaPredicted RBP4.14□□□□□ -1.75
UPF3B-205ENST00000636792 IGLV7-43P04211 117 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 CFC1BP0CG36 223 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 CFC1P0CG37 223 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 FXYD2P54710 66 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 Q5VSD8 79 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 OR13C6PQ8NH95 151 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
UPF3B-205ENST00000636792 ETDCA0A1B0GVM5 59 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 RPL37AP8A6NKH3 93 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 RPL13AP40429 203 aaKnown RBP4.13□□□□□ -1.75
UPF3B-205ENST00000636792 HAMPP81172 84 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 C1orf137Q5JT78 98 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 Q6ZRX8 168 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 KRTAP13-1Q8IUC0 172 aa4.13□□□□□ -1.75
UPF3B-205ENST00000636792 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
UPF3B-205ENST00000636792 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
UPF3B-205ENST00000636792 ZNF861PO60384 105 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 UBE2AP49459 152 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 ELOF1P60002 83 aaKnown RBP4.12□□□□□ -1.75
UPF3B-205ENST00000636792 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
UPF3B-205ENST00000636792 CTAG1AP78358 180 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 VAMP3Q15836 100 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 DHRS4-AS1Q9P1J3 65 aa4.12□□□□□ -1.75
UPF3B-205ENST00000636792 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 A0A1B0GX51 115 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 H0YGX0 51 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
UPF3B-205ENST00000636792 C6orf99Q4VX62 202 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 LYRM7Q5U5X0 104 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 KRTAP11-1Q8IUC1 163 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 SMIM11BQ8TCY0 68 aa4.11□□□□□ -1.75
UPF3B-205ENST00000636792 ZNF706Q9Y5V0 76 aaPredicted RBP4.11□□□□□ -1.75
UPF3B-205ENST00000636792 B5MCH6 92 aa4.1□□□□□ -1.75
UPF3B-205ENST00000636792 SNCGO76070 127 aa4.1□□□□□ -1.75
UPF3B-205ENST00000636792 COX6CP09669 75 aa4.1□□□□□ -1.75
UPF3B-205ENST00000636792 COX7BP24311 80 aa4.1□□□□□ -1.75
UPF3B-205ENST00000636792 SLC25A20O43772 301 aa4.09□□□□□ -1.75
UPF3B-205ENST00000636792 Q1RN00 199 aa4.09□□□□□ -1.75
UPF3B-205ENST00000636792 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
UPF3B-205ENST00000636792 HSPG2P98160 4391 aa4.09□□□□□ -1.76
UPF3B-205ENST00000636792 H3BQ85 93 aa4.08□□□□□ -1.76
UPF3B-205ENST00000636792 TSPAN13O95857 204 aa4.08□□□□□ -1.76
UPF3B-205ENST00000636792 OCIAD2Q56VL3 154 aa4.08□□□□□ -1.76
UPF3B-205ENST00000636792 PPDPFLQ8WWR9 84 aa4.08□□□□□ -1.76
UPF3B-205ENST00000636792 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
UPF3B-205ENST00000636792 PRLHP81277 87 aa4.07□□□□□ -1.76
UPF3B-205ENST00000636792 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
UPF3B-205ENST00000636792 HIGD2AQ9BW72 106 aa4.07□□□□□ -1.76
UPF3B-205ENST00000636792 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
UPF3B-205ENST00000636792 K7ERJ3 54 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 TRIAP1O43715 76 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 PSMB2P49721 201 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 COL5A1-AS1Q5SY13 56 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.06□□□□□ -1.76
UPF3B-205ENST00000636792 LINC00575Q6W349 94 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 SMCR5Q8TEV8 140 aa4.06□□□□□ -1.76
UPF3B-205ENST00000636792 Q9BRP9 147 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms