RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SONP18583 2426 aaKnown RBP2.87□□□□□ -1.95
SDCBP-213ENST00000630925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.87□□□□□ -1.95
SDCBP-213ENST00000630925 PPP1R17O96001 155 aa2.87□□□□□ -1.95
SDCBP-213ENST00000630925 DEFB110Q30KQ9 67 aa2.87□□□□□ -1.95
SDCBP-213ENST00000630925 Q86TA4 180 aa2.87□□□□□ -1.95
SDCBP-213ENST00000630925 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
SDCBP-213ENST00000630925 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
SDCBP-213ENST00000630925 SPAG11BQ08648 103 aa2.86□□□□□ -1.95
SDCBP-213ENST00000630925 SPAG11AQ6PDA7 123 aa2.86□□□□□ -1.95
SDCBP-213ENST00000630925 PPP1R1CQ8WVI7 109 aa2.86□□□□□ -1.95
SDCBP-213ENST00000630925 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
SDCBP-213ENST00000630925 ORMDL1Q9P0S3 153 aa2.86□□□□□ -1.95
SDCBP-213ENST00000630925 RPL38P63173 70 aaKnown RBP2.86□□□□□ -1.95
SDCBP-213ENST00000630925 HRNRQ86YZ3 2850 aaPredicted RBP2.85□□□□□ -1.95
SDCBP-213ENST00000630925 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
SDCBP-213ENST00000630925 LINC01549A6NIU2 74 aa2.85□□□□□ -1.95
SDCBP-213ENST00000630925 TTTY12Q9BZ98 90 aa2.85□□□□□ -1.95
SDCBP-213ENST00000630925 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
SDCBP-213ENST00000630925 A0A087WVE0 104 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 TRBV6-5A0A0K0K1A5 114 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 MRGPRG-AS1Q2M3A8 158 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 FDCSPQ8NFU4 85 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 NCOA6Q14686 2063 aaPredicted RBP2.84□□□□□ -1.95
SDCBP-213ENST00000630925 A0A087WYN8 130 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 CTSGP08311 255 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 SNRPGP62308 76 aaKnown RBP2.84□□□□□ -1.95
SDCBP-213ENST00000630925 Q6ZTI0 123 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 AMELXQ99217 191 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 NMES1Q9C002 83 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 PLAC8Q9NZF1 115 aa2.84□□□□□ -1.95
SDCBP-213ENST00000630925 ARFGEF3Q5TH69 2177 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 H0YGG7 62 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 DEFB134Q4QY38 66 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 FAM74A4Q5TZK3 123 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 ZNF563Q8TA94 476 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 VWFP04275 2813 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 DNAJC13O75165 2243 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 IGKV3D-7A0A0C4DH55 119 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 IGKV3OR2-268A0A0C4DH90 116 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 CCL3L1P16619 93 aa2.83□□□□□ -1.96
SDCBP-213ENST00000630925 UNC13CQ8NB66 2214 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 M0R3E3 92 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 IFI6P09912 130 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 CMC2Q9NRP2 79 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 CACNA1CQ13936 2221 aa2.82□□□□□ -1.96
SDCBP-213ENST00000630925 IGLV3-1P01715 115 aa2.81□□□□□ -1.96
SDCBP-213ENST00000630925 C14orf177Q52M58 125 aa2.81□□□□□ -1.96
SDCBP-213ENST00000630925 PDE6GP18545 87 aa2.81□□□□□ -1.96
SDCBP-213ENST00000630925 ABRACLQ9P1F3 81 aa2.81□□□□□ -1.96
SDCBP-213ENST00000630925 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
SDCBP-213ENST00000630925 LRCOL1A6NCL2 159 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 F8VRH5 84 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 PPYP01298 95 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 PRH1P02810 166 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 CCL18P55774 89 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 TRBV30A0A0K0K1B3 111 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 M0R135 149 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 IGKV3-20P01619 116 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 HMGA2P52926 109 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 TFF3Q07654 80 aa2.8□□□□□ -1.96
SDCBP-213ENST00000630925 IGKV2D-30A0A075B6S6 120 aa2.79□□□□□ -1.96
SDCBP-213ENST00000630925 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
SDCBP-213ENST00000630925 INTS1Q8N201 2190 aaKnown RBP2.78□□□□□ -1.96
SDCBP-213ENST00000630925 HRES1P13985 223 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 TPRXLQ17RH7 258 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 C4orf3Q8WVX3 66 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 TRAV1-2A0A0B4J238 106 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 NDPQ00604 133 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 GFRA4Q9GZZ7 299 aa2.78□□□□□ -1.96
SDCBP-213ENST00000630925 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 LY6EQ16553 131 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 R4GMQ9 66 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 TENM3Q9P273 2699 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 A0A087WTM6 91 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 J3QRE1 110 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 HCP5Q6MZN7 132 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 SPACA4Q8TDM5 124 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 WFDC6Q9BQY6 131 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 LINC00846Q9NV44 126 aa2.77□□□□□ -1.97
SDCBP-213ENST00000630925 TRBV6-4A0A1B0GX49 114 aa2.76□□□□□ -1.97
SDCBP-213ENST00000630925 ZNF137PP52743 207 aa2.76□□□□□ -1.97
SDCBP-213ENST00000630925 SPRR4Q96PI1 79 aa2.76□□□□□ -1.97
SDCBP-213ENST00000630925 USF3Q68DE3 2245 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 SLPIP03973 132 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 NBDYA0A0U1RRE5 68 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 A0A1B0GUT8 65 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 CPSF4LA6NMK7 179 aaKnown RBP2.75□□□□□ -1.97
SDCBP-213ENST00000630925 JMJD7-PLA2G4BH0Y9G9 81 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
SDCBP-213ENST00000630925 DOCK10Q96BY6 2186 aa2.74□□□□□ -1.97
SDCBP-213ENST00000630925 K7EMI3 77 aa2.74□□□□□ -1.97
SDCBP-213ENST00000630925 SPINK7P58062 85 aa2.74□□□□□ -1.97
SDCBP-213ENST00000630925 ABCA13Q86UQ4 5058 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms