RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
VCL-206ENST00000623461 Q75L30 129 aa5.89□□□□□ -1.47
VCL-206ENST00000623461 FP248Q71RG6 208 aaPredicted RBP5.89□□□□□ -1.47
VCL-206ENST00000623461 Q8NAQ8 132 aa5.89□□□□□ -1.47
VCL-206ENST00000623461 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
VCL-206ENST00000623461 KRTAP10-9P60411 292 aa5.88□□□□□ -1.47
VCL-206ENST00000623461 CSNK1G2-AS1Q8NCQ2 148 aa5.88□□□□□ -1.47
VCL-206ENST00000623461 USP9YO00507 2555 aaPredicted RBP5.88□□□□□ -1.47
VCL-206ENST00000623461 IGLV5-48A0A075B6I7 105 aa5.88□□□□□ -1.47
VCL-206ENST00000623461 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
VCL-206ENST00000623461 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
VCL-206ENST00000623461 TLX1NBP0CAT3 122 aa5.87□□□□□ -1.47
VCL-206ENST00000623461 DNAH10OSP0CZ25 163 aa5.87□□□□□ -1.47
VCL-206ENST00000623461 USP24Q9UPU5 2620 aa5.86□□□□□ -1.47
VCL-206ENST00000623461 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
VCL-206ENST00000623461 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
VCL-206ENST00000623461 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
VCL-206ENST00000623461 FAM168BA1KXE4 195 aa5.85□□□□□ -1.47
VCL-206ENST00000623461 LINC00612Q8N6U2 182 aa5.85□□□□□ -1.47
VCL-206ENST00000623461 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
VCL-206ENST00000623461 C15orf56Q8N910 161 aa5.84□□□□□ -1.48
VCL-206ENST00000623461 SMR3AQ99954 134 aa5.83□□□□□ -1.48
VCL-206ENST00000623461 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
VCL-206ENST00000623461 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
VCL-206ENST00000623461 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
VCL-206ENST00000623461 SPRR4Q96PI1 79 aa5.81□□□□□ -1.48
VCL-206ENST00000623461 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
VCL-206ENST00000623461 LINC00588Q9Y4M8 146 aa5.81□□□□□ -1.48
VCL-206ENST00000623461 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
VCL-206ENST00000623461 OXTP01178 125 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
VCL-206ENST00000623461 IGLV5-37A0A075B6J1 123 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 NBDYA0A0U1RRE5 68 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 A0A096LNT2 108 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 RTL8CO15255 209 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 GIG44P09565 113 aaPredicted RBP5.79□□□□□ -1.48
VCL-206ENST00000623461 DSCR10P59022 87 aa5.79□□□□□ -1.48
VCL-206ENST00000623461 Q96NJ1 140 aa5.78□□□□□ -1.48
VCL-206ENST00000623461 Q5VV11 94 aa5.77□□□□□ -1.49
VCL-206ENST00000623461 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
VCL-206ENST00000623461 H3BS24 57 aa5.75□□□□□ -1.49
VCL-206ENST00000623461 C19orf73Q9NVV2 129 aa5.75□□□□□ -1.49
VCL-206ENST00000623461 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
VCL-206ENST00000623461 A0A1W2PNN7 141 aa5.73□□□□□ -1.49
VCL-206ENST00000623461 C9orf163Q8N9P6 203 aa5.72□□□□□ -1.49
VCL-206ENST00000623461 SRCAPQ6ZRS2 3230 aa5.71□□□□□ -1.49
VCL-206ENST00000623461 ZNF861PO60384 105 aa5.7□□□□□ -1.5
VCL-206ENST00000623461 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
VCL-206ENST00000623461 LINC00304Q8N9R0 145 aa5.69□□□□□ -1.5
VCL-206ENST00000623461 CNBPP62633 177 aaKnown RBP5.69□□□□□ -1.5
VCL-206ENST00000623461 APLNQ9ULZ1 77 aa5.69□□□□□ -1.5
VCL-206ENST00000623461 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
VCL-206ENST00000623461 CR1P17927 2039 aa5.67□□□□□ -1.5
VCL-206ENST00000623461 BPTFQ12830 3046 aa5.67□□□□□ -1.5
VCL-206ENST00000623461 EPG5Q9HCE0 2579 aa5.66□□□□□ -1.5
VCL-206ENST00000623461 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
VCL-206ENST00000623461 PRAC1Q96KF2 57 aa5.65□□□□□ -1.51
VCL-206ENST00000623461 MMP24-AS1A0A0U1RRL7 71 aa5.64□□□□□ -1.51
VCL-206ENST00000623461 KRTAP24-1Q3LI83 254 aa5.64□□□□□ -1.51
VCL-206ENST00000623461 HRES1P13985 223 aa5.63□□□□□ -1.51
VCL-206ENST00000623461 SPINK7P58062 85 aa5.62□□□□□ -1.51
VCL-206ENST00000623461 SPRR1AP35321 89 aa5.61□□□□□ -1.51
VCL-206ENST00000623461 A0A1B0GU33 70 aa5.6□□□□□ -1.51
VCL-206ENST00000623461 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
VCL-206ENST00000623461 CEP295Q9C0D2 2601 aa5.6□□□□□ -1.51
VCL-206ENST00000623461 Q8NDZ9 215 aa5.6□□□□□ -1.51
VCL-206ENST00000623461 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
VCL-206ENST00000623461 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
VCL-206ENST00000623461 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
VCL-206ENST00000623461 MAST4O15021 2626 aa5.58□□□□□ -1.52
VCL-206ENST00000623461 CENPFP49454 3210 aa5.58□□□□□ -1.52
VCL-206ENST00000623461 Q8N1X5 172 aa5.57□□□□□ -1.52
VCL-206ENST00000623461 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
VCL-206ENST00000623461 HECTD1Q9ULT8 2610 aa5.57□□□□□ -1.52
VCL-206ENST00000623461 LINC00472Q9H8W2 130 aa5.57□□□□□ -1.52
VCL-206ENST00000623461 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
VCL-206ENST00000623461 MGAM2Q2M2H8 2515 aa5.55□□□□□ -1.52
VCL-206ENST00000623461 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
VCL-206ENST00000623461 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
VCL-206ENST00000623461 SPRR1BP22528 89 aa5.55□□□□□ -1.52
VCL-206ENST00000623461 ANAPC11Q9NYG5 84 aa5.55□□□□□ -1.52
VCL-206ENST00000623461 A0A087WTM6 91 aa5.54□□□□□ -1.52
VCL-206ENST00000623461 KRTAP10-11P60412 298 aa5.54□□□□□ -1.52
VCL-206ENST00000623461 FLNBO75369 2602 aaKnown RBP5.54□□□□□ -1.52
VCL-206ENST00000623461 GOLGB1Q14789 3259 aaKnown RBP5.54□□□□□ -1.52
VCL-206ENST00000623461 A0A0D9SG42 100 aa5.53□□□□□ -1.52
VCL-206ENST00000623461 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
VCL-206ENST00000623461 CFAP46Q8IYW2 2715 aa5.53□□□□□ -1.52
VCL-206ENST00000623461 M0R2T5 61 aa5.52□□□□□ -1.53
VCL-206ENST00000623461 Q6ZSA8 131 aa5.52□□□□□ -1.53
VCL-206ENST00000623461 STAB1Q9NY15 2570 aa5.52□□□□□ -1.53
VCL-206ENST00000623461 A6NN06 94 aa5.51□□□□□ -1.53
VCL-206ENST00000623461 TNP2Q05952 138 aa5.51□□□□□ -1.53
VCL-206ENST00000623461 C9orf92A6NGG3 77 aa5.5□□□□□ -1.53
VCL-206ENST00000623461 Q6ZR54 194 aa5.49□□□□□ -1.53
VCL-206ENST00000623461 Q5W150 140 aa5.49□□□□□ -1.53
VCL-206ENST00000623461 K7EIL1 84 aa5.49□□□□□ -1.53
VCL-206ENST00000623461 LCE6AA0A183 80 aa5.48□□□□□ -1.53
VCL-206ENST00000623461 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms