RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 TRAV10A0A0B4J240 114 aa7.31□□□□□ -1.24
TP53-223ENST00000618944 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
TP53-223ENST00000618944 RPL37AP8A6NKH3 93 aa7.31□□□□□ -1.24
TP53-223ENST00000618944 ATP5EP2Q5VTU8 51 aa7.31□□□□□ -1.24
TP53-223ENST00000618944 H3BQ85 93 aa7.3□□□□□ -1.24
TP53-223ENST00000618944 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
TP53-223ENST00000618944 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
TP53-223ENST00000618944 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
TP53-223ENST00000618944 HUWE1Q7Z6Z7 4374 aaKnown RBP7.29□□□□□ -1.24
TP53-223ENST00000618944 PDE6GP18545 87 aa7.29□□□□□ -1.24
TP53-223ENST00000618944 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
TP53-223ENST00000618944 GHRHP01286 108 aa7.28□□□□□ -1.24
TP53-223ENST00000618944 SCXQ7RTU7 201 aa7.28□□□□□ -1.24
TP53-223ENST00000618944 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
TP53-223ENST00000618944 F8WDY8 70 aa7.27□□□□□ -1.25
TP53-223ENST00000618944 K7EIL1 84 aa7.27□□□□□ -1.25
TP53-223ENST00000618944 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
TP53-223ENST00000618944 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
TP53-223ENST00000618944 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
TP53-223ENST00000618944 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
TP53-223ENST00000618944 LYSTQ99698 3801 aa7.25□□□□□ -1.25
TP53-223ENST00000618944 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
TP53-223ENST00000618944 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
TP53-223ENST00000618944 Q8N377 158 aa7.23□□□□□ -1.25
TP53-223ENST00000618944 TLX1NBP0CAT3 122 aa7.23□□□□□ -1.25
TP53-223ENST00000618944 MGAM2Q2M2H8 2515 aa7.23□□□□□ -1.25
TP53-223ENST00000618944 TMEM258P61165 79 aa7.22□□□□□ -1.25
TP53-223ENST00000618944 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
TP53-223ENST00000618944 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
TP53-223ENST00000618944 Q9BRP9 147 aa7.22□□□□□ -1.25
TP53-223ENST00000618944 C3orf84H3BNL1 204 aa7.21□□□□□ -1.25
TP53-223ENST00000618944 CXCL6P80162 114 aa7.21□□□□□ -1.25
TP53-223ENST00000618944 C5orf47Q569G3 176 aa7.21□□□□□ -1.25
TP53-223ENST00000618944 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.25
TP53-223ENST00000618944 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.26
TP53-223ENST00000618944 RMI2Q96E14 147 aa7.21□□□□□ -1.26
TP53-223ENST00000618944 DNAH10Q8IVF4 4471 aa7.21□□□□□ -1.26
TP53-223ENST00000618944 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
TP53-223ENST00000618944 Q6ZRX8 168 aa7.2□□□□□ -1.26
TP53-223ENST00000618944 Q8N9L7 120 aa7.2□□□□□ -1.26
TP53-223ENST00000618944 PLA2G2DQ9UNK4 145 aa7.2□□□□□ -1.26
TP53-223ENST00000618944 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
TP53-223ENST00000618944 KRTAP4-16G5E9R7 235 aaPredicted RBP7.19□□□□□ -1.26
TP53-223ENST00000618944 NREPQ16612 68 aa7.19□□□□□ -1.26
TP53-223ENST00000618944 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
TP53-223ENST00000618944 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
TP53-223ENST00000618944 Q5XG85 94 aa7.18□□□□□ -1.26
TP53-223ENST00000618944 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
TP53-223ENST00000618944 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
TP53-223ENST00000618944 IGLV5-37A0A075B6J1 123 aa7.17□□□□□ -1.26
TP53-223ENST00000618944 PRYO14603 147 aa7.17□□□□□ -1.26
TP53-223ENST00000618944 IGKV2-24A0A0C4DH68 120 aa7.17□□□□□ -1.26
TP53-223ENST00000618944 SPRR1AP35321 89 aa7.17□□□□□ -1.26
TP53-223ENST00000618944 UBE2BP63146 152 aa7.17□□□□□ -1.26
TP53-223ENST00000618944 CSMD3Q7Z407 3707 aa7.16□□□□□ -1.26
TP53-223ENST00000618944 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
TP53-223ENST00000618944 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
TP53-223ENST00000618944 IGLV5-48A0A075B6I7 105 aa7.15□□□□□ -1.26
TP53-223ENST00000618944 TRAV7A0A075B6U4 112 aa7.15□□□□□ -1.26
TP53-223ENST00000618944 PSCAO43653 123 aa7.15□□□□□ -1.26
TP53-223ENST00000618944 BPY2O14599 106 aa7.15□□□□□ -1.27
TP53-223ENST00000618944 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.14□□□□□ -1.27
TP53-223ENST00000618944 A0A096LNI7 61 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 REG3GQ6UW15 175 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 UBE2DNLQ8IWF7 75 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 A0A1W2PNM2 257 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 A0A1W2PNN7 141 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 C1orf137Q5JT78 98 aa7.13□□□□□ -1.27
TP53-223ENST00000618944 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
TP53-223ENST00000618944 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
TP53-223ENST00000618944 H7BZZ5 65 aa7.12□□□□□ -1.27
TP53-223ENST00000618944 FUSP35637 526 aaKnown RBP eCLIP7.12□□□□□ -1.27
TP53-223ENST00000618944 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
TP53-223ENST00000618944 FAM236DA0A1B0GTK5 79 aa7.11□□□□□ -1.27
TP53-223ENST00000618944 BCE1O60756 84 aa7.11□□□□□ -1.27
TP53-223ENST00000618944 FAM236CP0DP71 79 aa7.11□□□□□ -1.27
TP53-223ENST00000618944 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
TP53-223ENST00000618944 PRLHP81277 87 aa7.1□□□□□ -1.27
TP53-223ENST00000618944 TNP2Q05952 138 aa7.1□□□□□ -1.27
TP53-223ENST00000618944 CHTF8P0CG12 524 aa7.09□□□□□ -1.27
TP53-223ENST00000618944 C16orf90A8MZG2 172 aa7.09□□□□□ -1.27
TP53-223ENST00000618944 APLNQ9ULZ1 77 aa7.09□□□□□ -1.27
TP53-223ENST00000618944 F8WEM9 126 aa7.08□□□□□ -1.28
TP53-223ENST00000618944 SMIM29Q86T20 159 aa7.08□□□□□ -1.28
TP53-223ENST00000618944 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
TP53-223ENST00000618944 Q8NBF4 154 aa7.07□□□□□ -1.28
TP53-223ENST00000618944 CNBPP62633 177 aaKnown RBP7.07□□□□□ -1.28
TP53-223ENST00000618944 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
TP53-223ENST00000618944 KRTAP11-1Q8IUC1 163 aa7.06□□□□□ -1.28
TP53-223ENST00000618944 MDFIQ99750 246 aa7.06□□□□□ -1.28
TP53-223ENST00000618944 LINC00476Q8WZB0 136 aa7.06□□□□□ -1.28
TP53-223ENST00000618944 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
TP53-223ENST00000618944 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
TP53-223ENST00000618944 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
TP53-223ENST00000618944 DEFB116Q30KQ4 102 aa7.03□□□□□ -1.28
TP53-223ENST00000618944 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
TP53-223ENST00000618944 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
TP53-223ENST00000618944 PLECQ15149 4684 aaKnown RBP7.03□□□□□ -1.28
TP53-223ENST00000618944 IGFL1Q6UW32 110 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms