RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 LINC00208Q96KT6 92 aa9.27□□□□□ -0.93
CNOT3-210ENST00000618939 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
CNOT3-210ENST00000618939 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
CNOT3-210ENST00000618939 DMXL1Q9Y485 3027 aa9.25□□□□□ -0.93
CNOT3-210ENST00000618939 V9GYY9 64 aa9.24□□□□□ -0.93
CNOT3-210ENST00000618939 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
CNOT3-210ENST00000618939 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
CNOT3-210ENST00000618939 Q8NBF4 154 aa9.24□□□□□ -0.93
CNOT3-210ENST00000618939 A0A1B0GW54 56 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 HCG22E2RYF7 251 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 KRTAP10-11P60412 298 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 CFAP47Q6ZTR5 3102 aa9.23□□□□□ -0.93
CNOT3-210ENST00000618939 SERTAD4-AS1Q5TG53 156 aa9.22□□□□□ -0.93
CNOT3-210ENST00000618939 LY6G6CO95867 125 aa9.21□□□□□ -0.93
CNOT3-210ENST00000618939 RPS28P62857 69 aaKnown RBP9.21□□□□□ -0.93
CNOT3-210ENST00000618939 KCNQ1DNQ9H478 68 aa9.21□□□□□ -0.94
CNOT3-210ENST00000618939 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
CNOT3-210ENST00000618939 ZZEF1O43149 2961 aa9.2□□□□□ -0.94
CNOT3-210ENST00000618939 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
CNOT3-210ENST00000618939 FAM168BA1KXE4 195 aa9.19□□□□□ -0.94
CNOT3-210ENST00000618939 LINC00476Q8WZB0 136 aa9.19□□□□□ -0.94
CNOT3-210ENST00000618939 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
CNOT3-210ENST00000618939 OBSCN-AS1Q96MR7 158 aa9.17□□□□□ -0.94
CNOT3-210ENST00000618939 TRBV7-4A0A0J9YYF1 115 aa9.16□□□□□ -0.94
CNOT3-210ENST00000618939 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
CNOT3-210ENST00000618939 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
CNOT3-210ENST00000618939 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
CNOT3-210ENST00000618939 ITPR1Q14643 2758 aa9.15□□□□□ -0.94
CNOT3-210ENST00000618939 IGLV1-50A0A075B6I6 118 aa9.15□□□□□ -0.94
CNOT3-210ENST00000618939 MDFIQ99750 246 aa9.15□□□□□ -0.94
CNOT3-210ENST00000618939 NBEAL2Q6ZNJ1 2754 aa9.15□□□□□ -0.95
CNOT3-210ENST00000618939 IGLV5-52A0A0A0MRZ9 124 aa9.15□□□□□ -0.95
CNOT3-210ENST00000618939 H0Y9P7 68 aa9.15□□□□□ -0.95
CNOT3-210ENST00000618939 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.95
CNOT3-210ENST00000618939 IGHV6-1A0A0B4J1U7 121 aa9.14□□□□□ -0.95
CNOT3-210ENST00000618939 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
CNOT3-210ENST00000618939 Q8N377 158 aa9.12□□□□□ -0.95
CNOT3-210ENST00000618939 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
CNOT3-210ENST00000618939 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
CNOT3-210ENST00000618939 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
CNOT3-210ENST00000618939 K7EIL1 84 aa9.09□□□□□ -0.95
CNOT3-210ENST00000618939 TLX1NBP0CAT3 122 aa9.09□□□□□ -0.95
CNOT3-210ENST00000618939 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
CNOT3-210ENST00000618939 UBR5O95071 2799 aaPredicted RBP9.09□□□□□ -0.95
CNOT3-210ENST00000618939 NBDYA0A0U1RRE5 68 aa9.08□□□□□ -0.96
CNOT3-210ENST00000618939 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
CNOT3-210ENST00000618939 PCOTHQ58A44 107 aa9.08□□□□□ -0.96
CNOT3-210ENST00000618939 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
CNOT3-210ENST00000618939 PLA2G2DQ9UNK4 145 aa9.06□□□□□ -0.96
CNOT3-210ENST00000618939 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
CNOT3-210ENST00000618939 C1orf195Q5TG92 126 aa9.05□□□□□ -0.96
CNOT3-210ENST00000618939 NOTCH1P46531 2555 aa9.05□□□□□ -0.96
CNOT3-210ENST00000618939 CASC10Q5T4H9 136 aa9.05□□□□□ -0.96
CNOT3-210ENST00000618939 A6NED7 52 aa9.05□□□□□ -0.96
CNOT3-210ENST00000618939 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
CNOT3-210ENST00000618939 K7EQZ3 153 aa9.04□□□□□ -0.96
CNOT3-210ENST00000618939 HRNRQ86YZ3 2850 aaPredicted RBP9.04□□□□□ -0.96
CNOT3-210ENST00000618939 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
CNOT3-210ENST00000618939 Q8NDZ9 215 aa9.04□□□□□ -0.96
CNOT3-210ENST00000618939 PSPHP1O15172 72 aa9.03□□□□□ -0.96
CNOT3-210ENST00000618939 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
CNOT3-210ENST00000618939 RPL37AP61513 92 aaKnown RBP9.03□□□□□ -0.96
CNOT3-210ENST00000618939 MOBPQ13875 183 aa9.03□□□□□ -0.96
CNOT3-210ENST00000618939 UTP20O75691 2785 aaKnown RBP9.02□□□□□ -0.96
CNOT3-210ENST00000618939 WIPF1O43516 503 aa9.02□□□□□ -0.97
CNOT3-210ENST00000618939 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
CNOT3-210ENST00000618939 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
CNOT3-210ENST00000618939 COL6A5A8TX70 2615 aa8.99□□□□□ -0.97
CNOT3-210ENST00000618939 H7BZZ5 65 aa8.99□□□□□ -0.97
CNOT3-210ENST00000618939 A0A1W2PNM2 257 aa8.99□□□□□ -0.97
CNOT3-210ENST00000618939 SEC61GP60059 68 aa8.98□□□□□ -0.97
CNOT3-210ENST00000618939 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
CNOT3-210ENST00000618939 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
CNOT3-210ENST00000618939 RTL8CO15255 209 aa8.97□□□□□ -0.97
CNOT3-210ENST00000618939 STAB1Q9NY15 2570 aa8.97□□□□□ -0.97
CNOT3-210ENST00000618939 WDFY3Q8IZQ1 3526 aa8.96□□□□□ -0.97
CNOT3-210ENST00000618939 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.97
CNOT3-210ENST00000618939 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
CNOT3-210ENST00000618939 H3BPC8 53 aa8.95□□□□□ -0.98
CNOT3-210ENST00000618939 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
CNOT3-210ENST00000618939 IGLV5-37A0A075B6J1 123 aa8.94□□□□□ -0.98
CNOT3-210ENST00000618939 A8MWP4 228 aa8.94□□□□□ -0.98
CNOT3-210ENST00000618939 PRO0628Q9UI54 55 aa8.94□□□□□ -0.98
CNOT3-210ENST00000618939 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
CNOT3-210ENST00000618939 ITPR2Q14571 2701 aa8.93□□□□□ -0.98
CNOT3-210ENST00000618939 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
CNOT3-210ENST00000618939 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
CNOT3-210ENST00000618939 PRR15Q8IV56 129 aa8.89□□□□□ -0.99
CNOT3-210ENST00000618939 LIMD2Q9BT23 127 aa8.88□□□□□ -0.99
CNOT3-210ENST00000618939 ASH1LQ9NR48 2969 aaKnown RBP8.88□□□□□ -0.99
CNOT3-210ENST00000618939 MUC3AQ02505 3323 aa8.88□□□□□ -0.99
CNOT3-210ENST00000618939 APCP25054 2843 aa8.87□□□□□ -0.99
CNOT3-210ENST00000618939 PMAIP1Q13794 54 aa8.87□□□□□ -0.99
CNOT3-210ENST00000618939 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
CNOT3-210ENST00000618939 BAHCC1Q9P281 2608 aa8.87□□□□□ -0.99
CNOT3-210ENST00000618939 K7ERS5 55 aa8.84□□□□□ -0.99
CNOT3-210ENST00000618939 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms