RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 Q8NDZ9 215 aa2.88□□□□□ -1.95
SYCP1-210ENST00000618516 PLEKHB2Q96CS7 222 aa2.88□□□□□ -1.95
SYCP1-210ENST00000618516 A0A1W2PPM0 123 aa2.88□□□□□ -1.95
SYCP1-210ENST00000618516 C2orf48Q96LS8 159 aa2.88□□□□□ -1.95
SYCP1-210ENST00000618516 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
SYCP1-210ENST00000618516 TRAV12-1A0A0B4J245 112 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 UBE2AP49459 152 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 BATFQ16520 125 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 Q6ZSA8 131 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 VPS25Q9BRG1 176 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 FABP2P12104 132 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 SRSF9Q13242 221 aaKnown RBP eCLIP2.87□□□□□ -1.95
SYCP1-210ENST00000618516 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 LYRM7Q5U5X0 104 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 FAM19A1Q7Z5A9 133 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 KRTAP7-1Q8IUC3 87 aa2.87□□□□□ -1.95
SYCP1-210ENST00000618516 A0A1B0GV72 72 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 E9PLD3 99 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 TSPAN13O95857 204 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 S100A7L2Q5SY68 101 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
SYCP1-210ENST00000618516 LINC00474Q9P2X8 69 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 LRP2P98164 4655 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 TRBV30A0A0K0K1B3 111 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 H3BMG7 143 aa2.86□□□□□ -1.95
SYCP1-210ENST00000618516 IGLV5-45A0A087WSX0 123 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 A0A0J9YXY3 114 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 LEPROTO15243 131 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 CXCL5P42830 114 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 CIRBPQ14011 172 aaKnown RBP2.85□□□□□ -1.95
SYCP1-210ENST00000618516 SIGMAR1Q99720 223 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 LPAP08519 4548 aa2.85□□□□□ -1.95
SYCP1-210ENST00000618516 TRBV10-3A0A0K0K1G6 114 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 PRR26Q8N8Z3 221 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 DEFB105AQ8NG35 78 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 SOSTDC1Q6X4U4 206 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 CEND1Q8N111 149 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 SPANXB1Q9NS25 103 aaPredicted RBP2.84□□□□□ -1.95
SYCP1-210ENST00000618516 SPCS1Q9Y6A9 102 aa2.84□□□□□ -1.95
SYCP1-210ENST00000618516 TRBV20-1A0A075B6N2 111 aa2.84□□□□□ -1.96
SYCP1-210ENST00000618516 Q6Q795 121 aa2.84□□□□□ -1.96
SYCP1-210ENST00000618516 RPL24P83731 157 aaKnown RBP2.83□□□□□ -1.96
SYCP1-210ENST00000618516 HIST1H4GQ99525 98 aa2.83□□□□□ -1.96
SYCP1-210ENST00000618516 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
SYCP1-210ENST00000618516 ETDCA0A1B0GVM5 59 aa2.83□□□□□ -1.96
SYCP1-210ENST00000618516 GAGE2AQ6NT46 116 aa2.83□□□□□ -1.96
SYCP1-210ENST00000618516 IGLV9-49A0A0B4J1Y8 123 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 VPREB1P12018 145 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 C21orf62-AS1Q17RA5 79 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 MUSTN1Q8IVN3 82 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 TMEM126AQ9H061 195 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 Q1RN00 199 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 HRCT1Q6UXD1 115 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 H3BUT2 72 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 IGLV7-43P04211 117 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 RNF151Q2KHN1 245 aa2.82□□□□□ -1.96
SYCP1-210ENST00000618516 MUC2Q02817 5179 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 TNXBP22105 4242 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 HERV-K104P63124 156 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 REG3GQ6UW15 175 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 LINC00308Q8TCZ7 52 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 A0A0G2JQZ4 141 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 FAM19A3Q7Z5A8 133 aa2.81□□□□□ -1.96
SYCP1-210ENST00000618516 NAA38Q9BRA0 125 aaKnown RBP2.81□□□□□ -1.96
SYCP1-210ENST00000618516 C6orf99Q4VX62 202 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 PPDPFLQ8WWR9 84 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 FAM240AA0A1B0GVK7 77 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 M0R378 163 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 ERC2-IT1O76042 136 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
SYCP1-210ENST00000618516 A0A087X002 238 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 A4D1N5 150 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 RPL13AP40429 203 aaKnown RBP2.79□□□□□ -1.96
SYCP1-210ENST00000618516 Q6ZVH6 145 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 LINC00337Q8N6G1 96 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 PKIGQ9Y2B9 76 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 IGLV1-50A0A075B6I6 118 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 K7ERJ3 54 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 RPL28P46779 137 aaKnown RBP2.79□□□□□ -1.96
SYCP1-210ENST00000618516 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
SYCP1-210ENST00000618516 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 LINC01561Q8N1V8 128 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 DIRC1Q969H9 104 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 RAB37Q96AX2 223 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 TRAV23DV6A0A075B6W5 121 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 A0A0B4J2C4 111 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 ZNF861PO60384 105 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 FXYD2P54710 66 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 COX17Q14061 63 aa2.79□□□□□ -1.96
SYCP1-210ENST00000618516 PRR4Q16378 134 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms