RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 FLG2Q5D862 2391 aaPredicted RBP3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 SERP1Q9Y6X1 66 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 ACYP2P14621 99 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 COX7CP15954 63 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 SCXQ7RTU7 201 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 SPATA3Q8NHX4 192 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 Q6JHZ5 121 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 IGLV7-46A0A075B6I9 117 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 H3BQ85 93 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 CR1P17927 2039 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 BPY2O14599 106 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 Q6ZRU5 148 aa3.84□□□□□ -1.79
SYNCRIP-204ENST00000616122 UPK3BQ9BT76 320 aa3.84□□□□□ -1.8
SYNCRIP-204ENST00000616122 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 ESRGQ1W209 222 aa3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 FAM19A1Q7Z5A9 133 aa3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 PRR34Q9NV39 138 aa3.83□□□□□ -1.8
SYNCRIP-204ENST00000616122 J3QL48 77 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 C3orf84H3BNL1 204 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 KRTAP10-3P60369 221 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 A0A096LNI7 61 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 KRTAP24-1Q3LI83 254 aa3.82□□□□□ -1.8
SYNCRIP-204ENST00000616122 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
SYNCRIP-204ENST00000616122 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
SYNCRIP-204ENST00000616122 LINC01600Q96MT4 127 aa3.81□□□□□ -1.8
SYNCRIP-204ENST00000616122 RPL37AP8A6NKH3 93 aa3.81□□□□□ -1.8
SYNCRIP-204ENST00000616122 LINC01556Q5JQF7 62 aa3.8□□□□□ -1.8
SYNCRIP-204ENST00000616122 Q6ZVQ6 151 aa3.8□□□□□ -1.8
SYNCRIP-204ENST00000616122 J3KT08 172 aa3.8□□□□□ -1.8
SYNCRIP-204ENST00000616122 H3BNG1 76 aa3.79□□□□□ -1.8
SYNCRIP-204ENST00000616122 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
SYNCRIP-204ENST00000616122 MOBPQ13875 183 aa3.79□□□□□ -1.8
SYNCRIP-204ENST00000616122 C7orf33Q8WU49 177 aa3.79□□□□□ -1.8
SYNCRIP-204ENST00000616122 GVQW2A0A096LPI5 108 aaPredicted RBP3.78□□□□□ -1.8
SYNCRIP-204ENST00000616122 LINC00528Q8N1L1 170 aa3.78□□□□□ -1.8
SYNCRIP-204ENST00000616122 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
SYNCRIP-204ENST00000616122 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
SYNCRIP-204ENST00000616122 C4orf48Q5BLP8 95 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 SSBP3-AS1Q7Z2R9 100 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 IGLV6-57P01721 117 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 LRCOL1A6NCL2 159 aa3.77□□□□□ -1.81
SYNCRIP-204ENST00000616122 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SYNCRIP-204ENST00000616122 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
SYNCRIP-204ENST00000616122 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 Q6ZRP5 223 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 Q8N9L7 120 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 SPINK1P00995 79 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 CRYGAP11844 174 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 PMAIP1Q13794 54 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 SVEP1Q4LDE5 3571 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 TRAV7A0A075B6U4 112 aa3.75□□□□□ -1.81
SYNCRIP-204ENST00000616122 ELOF1P60002 83 aaKnown RBP3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 Q6ZQT0 140 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 MP68P56378 58 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 LINC00588Q9Y4M8 146 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 F8WDY8 70 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 NDUFB1O75438 58 aa3.74□□□□□ -1.81
SYNCRIP-204ENST00000616122 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 A0A087WSZ3 146 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 DNAH10OSP0CZ25 163 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 Q8NDZ9 215 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 CDC42SE1Q9NRR8 79 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 WFDC13Q8IUB5 93 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 A8MWP4 228 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 PRLHP81277 87 aa3.73□□□□□ -1.81
SYNCRIP-204ENST00000616122 C15orf56Q8N910 161 aa3.72□□□□□ -1.81
SYNCRIP-204ENST00000616122 LOC110117498A0A087WWA1 95 aa3.72□□□□□ -1.81
SYNCRIP-204ENST00000616122 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
SYNCRIP-204ENST00000616122 KRTAP10-11P60412 298 aa3.72□□□□□ -1.81
SYNCRIP-204ENST00000616122 TRBV7-4A0A0J9YYF1 115 aa3.72□□□□□ -1.81
SYNCRIP-204ENST00000616122 Q6ZRX8 168 aa3.71□□□□□ -1.81
SYNCRIP-204ENST00000616122 M0R2N4 97 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 Q8NBF4 154 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 CXCL6P80162 114 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 OBSCN-AS1Q96MR7 158 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 KCNQ1DNQ9H478 68 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 H0Y9J4 135 aa3.71□□□□□ -1.82
SYNCRIP-204ENST00000616122 NDUFC1O43677 76 aa3.7□□□□□ -1.82
SYNCRIP-204ENST00000616122 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SYNCRIP-204ENST00000616122 B9D2Q9BPU9 175 aa3.7□□□□□ -1.82
SYNCRIP-204ENST00000616122 K7EIL1 84 aa3.7□□□□□ -1.82
SYNCRIP-204ENST00000616122 ST20-AS1Q8NBB2 130 aa3.69□□□□□ -1.82
SYNCRIP-204ENST00000616122 CASC10Q5T4H9 136 aa3.69□□□□□ -1.82
SYNCRIP-204ENST00000616122 Q9BRP9 147 aa3.69□□□□□ -1.82
SYNCRIP-204ENST00000616122 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms