RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
TNXB-209ENST00000613214 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.79
TNXB-209ENST00000613214 UQCR11O14957 56 aa10.13□□□□□ -0.79
TNXB-209ENST00000613214 C10orf142B7Z368 130 aa10.13□□□□□ -0.79
TNXB-209ENST00000613214 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
TNXB-209ENST00000613214 H3BPC8 53 aa10.11□□□□□ -0.79
TNXB-209ENST00000613214 PRR15Q8IV56 129 aa10.11□□□□□ -0.79
TNXB-209ENST00000613214 A0A1B0GVX0 72 aa10.11□□□□□ -0.79
TNXB-209ENST00000613214 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
TNXB-209ENST00000613214 ACANP16112 2415 aa10.09□□□□□ -0.79
TNXB-209ENST00000613214 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
TNXB-209ENST00000613214 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
TNXB-209ENST00000613214 Q8N377 158 aa10.08□□□□□ -0.8
TNXB-209ENST00000613214 PRO0461Q9UI25 63 aa10.07□□□□□ -0.8
TNXB-209ENST00000613214 ERC2-IT1O76042 136 aa10.06□□□□□ -0.8
TNXB-209ENST00000613214 LITAFQ99732 161 aa10.05□□□□□ -0.8
TNXB-209ENST00000613214 KCNQ1DNQ9H478 68 aa10.05□□□□□ -0.8
TNXB-209ENST00000613214 Q6ZSA8 131 aa10.04□□□□□ -0.8
TNXB-209ENST00000613214 PIEZO1Q92508 2521 aa10.03□□□□□ -0.8
TNXB-209ENST00000613214 USP9XQ93008 2570 aaPredicted RBP10.01□□□□□ -0.81
TNXB-209ENST00000613214 TNP2Q05952 138 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 PKD1L2Q7Z442 2459 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 DNAH12Q6ZR08 3092 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 A0A1B0GW54 56 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
TNXB-209ENST00000613214 LINC00336Q6ZUF6 198 aa9.98□□□□□ -0.81
TNXB-209ENST00000613214 PLA2G2DQ9UNK4 145 aa9.98□□□□□ -0.81
TNXB-209ENST00000613214 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
TNXB-209ENST00000613214 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
TNXB-209ENST00000613214 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
TNXB-209ENST00000613214 ANKRD11Q6UB99 2663 aaPredicted RBP9.94□□□□□ -0.82
TNXB-209ENST00000613214 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
TNXB-209ENST00000613214 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
TNXB-209ENST00000613214 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
TNXB-209ENST00000613214 IGLV7-46A0A075B6I9 117 aa9.93□□□□□ -0.82
TNXB-209ENST00000613214 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
TNXB-209ENST00000613214 POLQO75417 2590 aa9.93□□□□□ -0.82
TNXB-209ENST00000613214 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
TNXB-209ENST00000613214 WIPF1O43516 503 aa9.88□□□□□ -0.83
TNXB-209ENST00000613214 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
TNXB-209ENST00000613214 BPTFQ12830 3046 aa9.87□□□□□ -0.83
TNXB-209ENST00000613214 PRR34Q9NV39 138 aa9.87□□□□□ -0.83
TNXB-209ENST00000613214 MTORP42345 2549 aa9.86□□□□□ -0.83
TNXB-209ENST00000613214 LUZP6Q538Z0 58 aa9.86□□□□□ -0.83
TNXB-209ENST00000613214 CR1P17927 2039 aa9.85□□□□□ -0.83
TNXB-209ENST00000613214 CHD8Q9HCK8 2581 aa9.84□□□□□ -0.83
TNXB-209ENST00000613214 CYP4F30PQ9H0H9 118 aa9.84□□□□□ -0.83
TNXB-209ENST00000613214 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
TNXB-209ENST00000613214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.83□□□□□ -0.84
TNXB-209ENST00000613214 A0A1W2PNM2 257 aa9.81□□□□□ -0.84
TNXB-209ENST00000613214 CD164Q04900 197 aa9.81□□□□□ -0.84
TNXB-209ENST00000613214 USP9YO00507 2555 aaPredicted RBP9.78□□□□□ -0.84
TNXB-209ENST00000613214 TLX1NBP0CAT3 122 aa9.76□□□□□ -0.85
TNXB-209ENST00000613214 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
TNXB-209ENST00000613214 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
TNXB-209ENST00000613214 PCNTO95613 3336 aa9.75□□□□□ -0.85
TNXB-209ENST00000613214 FASNP49327 2511 aaKnown RBP9.75□□□□□ -0.85
TNXB-209ENST00000613214 LINC00483Q53H64 154 aa9.74□□□□□ -0.85
TNXB-209ENST00000613214 A0A096LNT2 108 aa9.74□□□□□ -0.85
TNXB-209ENST00000613214 S4R3F8 94 aa9.72□□□□□ -0.85
TNXB-209ENST00000613214 H7BZZ5 65 aa9.71□□□□□ -0.85
TNXB-209ENST00000613214 USP24Q9UPU5 2620 aa9.7□□□□□ -0.86
TNXB-209ENST00000613214 CNBPP62633 177 aaKnown RBP9.7□□□□□ -0.86
TNXB-209ENST00000613214 KRTAP1-3Q8IUG1 177 aa9.7□□□□□ -0.86
TNXB-209ENST00000613214 KTN1-AS1Q86SY8 53 aa9.68□□□□□ -0.86
TNXB-209ENST00000613214 LCA10Q71F78 164 aa9.67□□□□□ -0.86
TNXB-209ENST00000613214 A0A1B0GU33 70 aa9.67□□□□□ -0.86
TNXB-209ENST00000613214 HRES1P13985 223 aa9.65□□□□□ -0.86
TNXB-209ENST00000613214 Q1T7F1 81 aa9.65□□□□□ -0.87
TNXB-209ENST00000613214 KLKP1Q107X0 134 aa9.64□□□□□ -0.87
TNXB-209ENST00000613214 Q5VSD8 79 aa9.64□□□□□ -0.87
TNXB-209ENST00000613214 KRTAP1-1Q07627 177 aa9.62□□□□□ -0.87
TNXB-209ENST00000613214 Q8N9P0 234 aaPredicted RBP9.6□□□□□ -0.87
TNXB-209ENST00000613214 R4GN34 69 aa9.56□□□□□ -0.88
TNXB-209ENST00000613214 PRAC1Q96KF2 57 aa9.56□□□□□ -0.88
TNXB-209ENST00000613214 CSAG1Q6PB30 78 aa9.55□□□□□ -0.88
TNXB-209ENST00000613214 KLK9Q2XQG4 91 aa9.53□□□□□ -0.88
TNXB-209ENST00000613214 ZCCHC13Q8WW36 166 aaKnown RBP9.52□□□□□ -0.88
TNXB-209ENST00000613214 FAM229BQ4G0N7 80 aa9.51□□□□□ -0.89
TNXB-209ENST00000613214 PRRC2CQ9Y520 2896 aaKnown RBP9.51□□□□□ -0.89
TNXB-209ENST00000613214 SPANXA2-OT1Q8N9U9 137 aa9.49□□□□□ -0.89
TNXB-209ENST00000613214 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
TNXB-209ENST00000613214 SPINK7P58062 85 aa9.46□□□□□ -0.89
TNXB-209ENST00000613214 HECTD1Q9ULT8 2610 aa9.44□□□□□ -0.9
TNXB-209ENST00000613214 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
TNXB-209ENST00000613214 M0QZ58 72 aa9.43□□□□□ -0.9
TNXB-209ENST00000613214 KRTAP10-2P60368 255 aa9.42□□□□□ -0.9
TNXB-209ENST00000613214 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
TNXB-209ENST00000613214 Q5W150 140 aa9.41□□□□□ -0.9
TNXB-209ENST00000613214 H3BS24 57 aa9.41□□□□□ -0.9
TNXB-209ENST00000613214 XIRP2A4UGR9 3374 aa9.4□□□□□ -0.9
TNXB-209ENST00000613214 Q8NDZ9 215 aa9.4□□□□□ -0.9
TNXB-209ENST00000613214 KRTAP10-1P60331 282 aa9.39□□□□□ -0.91
TNXB-209ENST00000613214 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
TNXB-209ENST00000613214 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
TNXB-209ENST00000613214 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
TNXB-209ENST00000613214 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
TNXB-209ENST00000613214 H1FX-AS1Q4G0G2 97 aa9.38□□□□□ -0.91
TNXB-209ENST00000613214 PLAC4Q8WY50 150 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms