RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CXCL6P80162 114 aa11.22□□□□□ -0.61
NEK3-206ENST00000611833 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
NEK3-206ENST00000611833 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
NEK3-206ENST00000611833 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.62
NEK3-206ENST00000611833 TM2D3Q9BRN9 247 aa11.21□□□□□ -0.62
NEK3-206ENST00000611833 CASC10Q5T4H9 136 aa11.2□□□□□ -0.62
NEK3-206ENST00000611833 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
NEK3-206ENST00000611833 HUWE1Q7Z6Z7 4374 aaKnown RBP11.18□□□□□ -0.62
NEK3-206ENST00000611833 RPL37AP8A6NKH3 93 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 RMI2Q96E14 147 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 DNAH1Q9P2D7 4330 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 K7EIL1 84 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
NEK3-206ENST00000611833 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
NEK3-206ENST00000611833 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
NEK3-206ENST00000611833 COL6A5A8TX70 2615 aa11.17□□□□□ -0.62
NEK3-206ENST00000611833 TMEM258P61165 79 aa11.16□□□□□ -0.62
NEK3-206ENST00000611833 BCE1O60756 84 aa11.15□□□□□ -0.62
NEK3-206ENST00000611833 Q8N377 158 aa11.14□□□□□ -0.63
NEK3-206ENST00000611833 DHRS4-AS1Q9P1J3 65 aa11.14□□□□□ -0.63
NEK3-206ENST00000611833 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 ETDCA0A1B0GVM5 59 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 Q6ZRX8 168 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 IGLV5-37A0A075B6J1 123 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 PRYO14603 147 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
NEK3-206ENST00000611833 TRAV7A0A075B6U4 112 aa11.12□□□□□ -0.63
NEK3-206ENST00000611833 J3KT08 172 aa11.12□□□□□ -0.63
NEK3-206ENST00000611833 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
NEK3-206ENST00000611833 NREPQ16612 68 aa11.1□□□□□ -0.63
NEK3-206ENST00000611833 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
NEK3-206ENST00000611833 Q9BRP9 147 aa11.1□□□□□ -0.63
NEK3-206ENST00000611833 KRTAP4-16G5E9R7 235 aaPredicted RBP11.09□□□□□ -0.63
NEK3-206ENST00000611833 KRTAP7-1Q8IUC3 87 aa11.09□□□□□ -0.63
NEK3-206ENST00000611833 C3orf84H3BNL1 204 aa11.08□□□□□ -0.64
NEK3-206ENST00000611833 SPRR1AP35321 89 aa11.08□□□□□ -0.64
NEK3-206ENST00000611833 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
NEK3-206ENST00000611833 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
NEK3-206ENST00000611833 RPS28P62857 69 aaKnown RBP11.07□□□□□ -0.64
NEK3-206ENST00000611833 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
NEK3-206ENST00000611833 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
NEK3-206ENST00000611833 Q8N9L7 120 aa11.04□□□□□ -0.64
NEK3-206ENST00000611833 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.64
NEK3-206ENST00000611833 SVIPQ8NHG7 77 aa11.04□□□□□ -0.64
NEK3-206ENST00000611833 UBE2BP63146 152 aa11.03□□□□□ -0.64
NEK3-206ENST00000611833 BPY2O14599 106 aa11.03□□□□□ -0.64
NEK3-206ENST00000611833 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
NEK3-206ENST00000611833 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
NEK3-206ENST00000611833 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
NEK3-206ENST00000611833 LYSTQ99698 3801 aa11.01□□□□□ -0.65
NEK3-206ENST00000611833 KRTAP1-5Q9BYS1 174 aa11.01□□□□□ -0.65
NEK3-206ENST00000611833 IGKV4-1P06312 121 aa11□□□□□ -0.65
NEK3-206ENST00000611833 COL7A1Q02388 2944 aa11□□□□□ -0.65
NEK3-206ENST00000611833 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
NEK3-206ENST00000611833 SNURFQ9Y675 71 aa10.99□□□□□ -0.65
NEK3-206ENST00000611833 MGAM2Q2M2H8 2515 aa10.99□□□□□ -0.65
NEK3-206ENST00000611833 TNP2Q05952 138 aa10.98□□□□□ -0.65
NEK3-206ENST00000611833 KLKP1Q107X0 134 aa10.98□□□□□ -0.65
NEK3-206ENST00000611833 A0A1B0GW54 56 aa10.98□□□□□ -0.65
NEK3-206ENST00000611833 PSCAO43653 123 aa10.98□□□□□ -0.65
NEK3-206ENST00000611833 DNAH10Q8IVF4 4471 aa10.98□□□□□ -0.65
NEK3-206ENST00000611833 IGKV2-24A0A0C4DH68 120 aa10.96□□□□□ -0.65
NEK3-206ENST00000611833 H7BZZ5 65 aa10.96□□□□□ -0.65
NEK3-206ENST00000611833 Q8NBF4 154 aa10.96□□□□□ -0.66
NEK3-206ENST00000611833 A0A096LNI7 61 aa10.95□□□□□ -0.66
NEK3-206ENST00000611833 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
NEK3-206ENST00000611833 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
NEK3-206ENST00000611833 UBE2DNLQ8IWF7 75 aa10.95□□□□□ -0.66
NEK3-206ENST00000611833 DNAH9Q9NYC9 4486 aa10.95□□□□□ -0.66
NEK3-206ENST00000611833 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
NEK3-206ENST00000611833 STAB2Q8WWQ8 2551 aa10.94□□□□□ -0.66
NEK3-206ENST00000611833 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
NEK3-206ENST00000611833 OXTP01178 125 aa10.91□□□□□ -0.66
NEK3-206ENST00000611833 A0A1W2PNN7 141 aa10.91□□□□□ -0.66
NEK3-206ENST00000611833 F8WEM9 126 aa10.91□□□□□ -0.66
NEK3-206ENST00000611833 SPRR4Q96PI1 79 aa10.91□□□□□ -0.66
NEK3-206ENST00000611833 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.9□□□□□ -0.66
NEK3-206ENST00000611833 APLNQ9ULZ1 77 aa10.9□□□□□ -0.66
NEK3-206ENST00000611833 PRLHP81277 87 aa10.9□□□□□ -0.67
NEK3-206ENST00000611833 SMIM29Q86T20 159 aa10.89□□□□□ -0.67
NEK3-206ENST00000611833 TMEM254Q8TBM7 123 aa10.88□□□□□ -0.67
NEK3-206ENST00000611833 LINC00476Q8WZB0 136 aa10.88□□□□□ -0.67
NEK3-206ENST00000611833 NDUFC1O43677 76 aa10.87□□□□□ -0.67
NEK3-206ENST00000611833 OCR1Q9BZK8 76 aa10.87□□□□□ -0.67
NEK3-206ENST00000611833 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
NEK3-206ENST00000611833 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
NEK3-206ENST00000611833 DYNC2H1Q8NCM8 4307 aaKnown RBP10.83□□□□□ -0.68
NEK3-206ENST00000611833 A0A0G2JQZ4 141 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 CSMD3Q7Z407 3707 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 CHTF8P0CG12 524 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 IGFL1Q6UW32 110 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 SERP1Q9Y6X1 66 aa10.83□□□□□ -0.68
NEK3-206ENST00000611833 MDFIQ99750 246 aa10.82□□□□□ -0.68
NEK3-206ENST00000611833 DSCR10P59022 87 aa10.81□□□□□ -0.68
NEK3-206ENST00000611833 PHF5AQ7RTV0 110 aaKnown RBP10.81□□□□□ -0.68
NEK3-206ENST00000611833 B9D2Q9BPU9 175 aa10.81□□□□□ -0.68
NEK3-206ENST00000611833 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
NEK3-206ENST00000611833 K7EQZ3 153 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms