RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 KCNQ1DNQ9H478 68 aa8.26□□□□□ -1.09
CDH1-212ENST00000611625 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
CDH1-212ENST00000611625 CIRBP-AS1Q8TBR5 109 aa8.25□□□□□ -1.09
CDH1-212ENST00000611625 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
CDH1-212ENST00000611625 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
CDH1-212ENST00000611625 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
CDH1-212ENST00000611625 C1orf64Q8NEQ6 169 aa8.24□□□□□ -1.09
CDH1-212ENST00000611625 FRYLO94915 3013 aa8.23□□□□□ -1.09
CDH1-212ENST00000611625 OBSCN-AS1Q96MR7 158 aa8.23□□□□□ -1.09
CDH1-212ENST00000611625 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
CDH1-212ENST00000611625 IGLV5-52A0A0A0MRZ9 124 aa8.22□□□□□ -1.09
CDH1-212ENST00000611625 C16orf90A8MZG2 172 aa8.21□□□□□ -1.09
CDH1-212ENST00000611625 CHD6Q8TD26 2715 aa8.21□□□□□ -1.09
CDH1-212ENST00000611625 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.09
CDH1-212ENST00000611625 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
CDH1-212ENST00000611625 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
CDH1-212ENST00000611625 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
CDH1-212ENST00000611625 HELZ2Q9BYK8 2649 aaKnown RBP8.2□□□□□ -1.1
CDH1-212ENST00000611625 EPM2AB3EWF7 344 aa8.19□□□□□ -1.1
CDH1-212ENST00000611625 Q8N377 158 aa8.19□□□□□ -1.1
CDH1-212ENST00000611625 K7EQZ3 153 aa8.18□□□□□ -1.1
CDH1-212ENST00000611625 MDFIQ99750 246 aa8.17□□□□□ -1.1
CDH1-212ENST00000611625 KRTAP10-11P60412 298 aa8.17□□□□□ -1.1
CDH1-212ENST00000611625 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
CDH1-212ENST00000611625 RPL37AP61513 92 aaKnown RBP8.16□□□□□ -1.1
CDH1-212ENST00000611625 FREM2Q5SZK8 3169 aa8.16□□□□□ -1.1
CDH1-212ENST00000611625 H7BZZ5 65 aa8.16□□□□□ -1.1
CDH1-212ENST00000611625 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
CDH1-212ENST00000611625 BOD1L1Q8NFC6 3051 aa8.15□□□□□ -1.1
CDH1-212ENST00000611625 MOBPQ13875 183 aa8.15□□□□□ -1.11
CDH1-212ENST00000611625 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.11
CDH1-212ENST00000611625 MAST4O15021 2626 aa8.15□□□□□ -1.11
CDH1-212ENST00000611625 CR1P17927 2039 aa8.15□□□□□ -1.11
CDH1-212ENST00000611625 KALRNO60229 2985 aa8.14□□□□□ -1.11
CDH1-212ENST00000611625 H3BPC8 53 aa8.14□□□□□ -1.11
CDH1-212ENST00000611625 SPEGQ15772 3267 aa8.14□□□□□ -1.11
CDH1-212ENST00000611625 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
CDH1-212ENST00000611625 GCN1Q92616 2671 aaKnown RBP8.13□□□□□ -1.11
CDH1-212ENST00000611625 LIMD2Q9BT23 127 aa8.13□□□□□ -1.11
CDH1-212ENST00000611625 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
CDH1-212ENST00000611625 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
CDH1-212ENST00000611625 NBDYA0A0U1RRE5 68 aa8.11□□□□□ -1.11
CDH1-212ENST00000611625 IGFL1Q6UW32 110 aa8.11□□□□□ -1.11
CDH1-212ENST00000611625 RETNLBQ9BQ08 111 aa8.11□□□□□ -1.11
CDH1-212ENST00000611625 PLA2G2DQ9UNK4 145 aa8.11□□□□□ -1.11
CDH1-212ENST00000611625 REV3LO60673 3130 aa8.1□□□□□ -1.11
CDH1-212ENST00000611625 A8MWP4 228 aa8.09□□□□□ -1.11
CDH1-212ENST00000611625 IGSF10Q6WRI0 2623 aa8.08□□□□□ -1.12
CDH1-212ENST00000611625 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
CDH1-212ENST00000611625 A0A0G2JQZ4 141 aa8.07□□□□□ -1.12
CDH1-212ENST00000611625 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
CDH1-212ENST00000611625 ATMQ13315 3056 aa8.06□□□□□ -1.12
CDH1-212ENST00000611625 CASC10Q5T4H9 136 aa8.06□□□□□ -1.12
CDH1-212ENST00000611625 K7EIL1 84 aa8.06□□□□□ -1.12
CDH1-212ENST00000611625 COL6A3P12111 3177 aa8.05□□□□□ -1.12
CDH1-212ENST00000611625 Q8NDZ9 215 aa8.05□□□□□ -1.12
CDH1-212ENST00000611625 IGLV5-48A0A075B6I7 105 aa8.04□□□□□ -1.12
CDH1-212ENST00000611625 TEX15Q9BXT5 2789 aa8.04□□□□□ -1.12
CDH1-212ENST00000611625 RTL8CO15255 209 aa8.04□□□□□ -1.12
CDH1-212ENST00000611625 PRR15Q8IV56 129 aa8.03□□□□□ -1.12
CDH1-212ENST00000611625 UNC79Q9P2D8 2635 aa8.03□□□□□ -1.12
CDH1-212ENST00000611625 K7ERS5 55 aa8.02□□□□□ -1.12
CDH1-212ENST00000611625 FLNCQ14315 2725 aa8.02□□□□□ -1.12
CDH1-212ENST00000611625 SPTBN5Q9NRC6 3674 aaKnown RBP8.02□□□□□ -1.13
CDH1-212ENST00000611625 NBEAL2Q6ZNJ1 2754 aa8.01□□□□□ -1.13
CDH1-212ENST00000611625 LRBAP50851 2863 aa8.01□□□□□ -1.13
CDH1-212ENST00000611625 SPAG11AQ6PDA7 123 aa8.01□□□□□ -1.13
CDH1-212ENST00000611625 LINC00336Q6ZUF6 198 aa8□□□□□ -1.13
CDH1-212ENST00000611625 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
CDH1-212ENST00000611625 EYSQ5T1H1 3165 aa8□□□□□ -1.13
CDH1-212ENST00000611625 DMXL2Q8TDJ6 3036 aa8□□□□□ -1.13
CDH1-212ENST00000611625 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
CDH1-212ENST00000611625 IGKV2-30P06310 120 aa8□□□□□ -1.13
CDH1-212ENST00000611625 SPINK1P00995 79 aa7.98□□□□□ -1.13
CDH1-212ENST00000611625 SETXQ7Z333 2677 aaKnown RBP7.98□□□□□ -1.13
CDH1-212ENST00000611625 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
CDH1-212ENST00000611625 A8MUN3 132 aa7.98□□□□□ -1.13
CDH1-212ENST00000611625 TACC2O95359 2948 aa7.98□□□□□ -1.13
CDH1-212ENST00000611625 ACYP2P14621 99 aa7.97□□□□□ -1.13
CDH1-212ENST00000611625 OCR1Q9BZK8 76 aa7.97□□□□□ -1.13
CDH1-212ENST00000611625 SPACA4Q8TDM5 124 aa7.96□□□□□ -1.13
CDH1-212ENST00000611625 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.13
CDH1-212ENST00000611625 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.13
CDH1-212ENST00000611625 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
CDH1-212ENST00000611625 COA5Q86WW8 74 aa7.95□□□□□ -1.14
CDH1-212ENST00000611625 COL12A1Q99715 3063 aa7.95□□□□□ -1.14
CDH1-212ENST00000611625 WIPF1O43516 503 aa7.95□□□□□ -1.14
CDH1-212ENST00000611625 TEP1Q99973 2627 aaKnown RBP7.94□□□□□ -1.14
CDH1-212ENST00000611625 C8orf17Q9NRJ1 99 aa7.94□□□□□ -1.14
CDH1-212ENST00000611625 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
CDH1-212ENST00000611625 LINC00313P59037 77 aa7.93□□□□□ -1.14
CDH1-212ENST00000611625 NOTCH1P46531 2555 aa7.93□□□□□ -1.14
CDH1-212ENST00000611625 A0A1B0GU69 56 aa7.92□□□□□ -1.14
CDH1-212ENST00000611625 SPRR4Q96PI1 79 aa7.92□□□□□ -1.14
CDH1-212ENST00000611625 UBR5O95071 2799 aaPredicted RBP7.92□□□□□ -1.14
CDH1-212ENST00000611625 ITPR1Q14643 2758 aa7.92□□□□□ -1.14
CDH1-212ENST00000611625 DSCR10P59022 87 aa7.91□□□□□ -1.14
CDH1-212ENST00000611625 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
CDH1-212ENST00000611625 C7orf65Q6ZTY9 151 aa7.9□□□□□ -1.14
CDH1-212ENST00000611625 CFAP47Q6ZTR5 3102 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms