RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 PRB2P02812 416 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-224ENST00000610907 PRYO14603 147 aa6.78□□□□□ -1.32
PABPC1-224ENST00000610907 SERTAD4-AS1Q5TG53 156 aa6.78□□□□□ -1.32
PABPC1-224ENST00000610907 DHRS4-AS1Q9P1J3 65 aa6.78□□□□□ -1.32
PABPC1-224ENST00000610907 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
PABPC1-224ENST00000610907 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
PABPC1-224ENST00000610907 BCE1O60756 84 aa6.77□□□□□ -1.33
PABPC1-224ENST00000610907 CXCL6P80162 114 aa6.77□□□□□ -1.33
PABPC1-224ENST00000610907 SPRR1AP35321 89 aa6.76□□□□□ -1.33
PABPC1-224ENST00000610907 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
PABPC1-224ENST00000610907 Q6ZVQ6 151 aa6.76□□□□□ -1.33
PABPC1-224ENST00000610907 SERP2Q8N6R1 65 aa6.76□□□□□ -1.33
PABPC1-224ENST00000610907 NOTCH1P46531 2555 aa6.75□□□□□ -1.33
PABPC1-224ENST00000610907 A0A087WVE0 104 aa6.75□□□□□ -1.33
PABPC1-224ENST00000610907 CRYGAP11844 174 aa6.75□□□□□ -1.33
PABPC1-224ENST00000610907 CASC10Q5T4H9 136 aa6.75□□□□□ -1.33
PABPC1-224ENST00000610907 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
PABPC1-224ENST00000610907 A0A1B0GW54 56 aa6.74□□□□□ -1.33
PABPC1-224ENST00000610907 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-224ENST00000610907 LINC01547P58512 204 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-224ENST00000610907 Q6ZRX8 168 aa6.74□□□□□ -1.33
PABPC1-224ENST00000610907 M0R2N4 97 aa6.74□□□□□ -1.33
PABPC1-224ENST00000610907 ETDCA0A1B0GVM5 59 aa6.73□□□□□ -1.33
PABPC1-224ENST00000610907 MRPL55Q7Z7F7 128 aaKnown RBP6.73□□□□□ -1.33
PABPC1-224ENST00000610907 IGLV5-48A0A075B6I7 105 aa6.72□□□□□ -1.33
PABPC1-224ENST00000610907 CNBPP62633 177 aaKnown RBP6.72□□□□□ -1.33
PABPC1-224ENST00000610907 HAMPP81172 84 aa6.72□□□□□ -1.33
PABPC1-224ENST00000610907 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
PABPC1-224ENST00000610907 Q8N377 158 aa6.72□□□□□ -1.33
PABPC1-224ENST00000610907 NBEAL1Q6ZS30 2694 aa6.71□□□□□ -1.34
PABPC1-224ENST00000610907 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.34
PABPC1-224ENST00000610907 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 RPL37AP8A6NKH3 93 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 C14orf177Q52M58 125 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 SMIM20Q8N5G0 67 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 APLNQ9ULZ1 77 aa6.7□□□□□ -1.34
PABPC1-224ENST00000610907 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
PABPC1-224ENST00000610907 UBE2DNLQ8IWF7 75 aa6.69□□□□□ -1.34
PABPC1-224ENST00000610907 Q9BRP9 147 aa6.69□□□□□ -1.34
PABPC1-224ENST00000610907 PSCAO43653 123 aa6.68□□□□□ -1.34
PABPC1-224ENST00000610907 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
PABPC1-224ENST00000610907 FAM19A5Q7Z5A7 132 aaPredicted RBP6.68□□□□□ -1.34
PABPC1-224ENST00000610907 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
PABPC1-224ENST00000610907 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
PABPC1-224ENST00000610907 DNAH1Q9P2D7 4330 aa6.68□□□□□ -1.34
PABPC1-224ENST00000610907 TNP2Q05952 138 aa6.66□□□□□ -1.34
PABPC1-224ENST00000610907 NREPQ16612 68 aa6.66□□□□□ -1.34
PABPC1-224ENST00000610907 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
PABPC1-224ENST00000610907 FBN3Q75N90 2809 aa6.66□□□□□ -1.34
PABPC1-224ENST00000610907 TRAV7A0A075B6U4 112 aa6.65□□□□□ -1.34
PABPC1-224ENST00000610907 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
PABPC1-224ENST00000610907 MGAM2Q2M2H8 2515 aa6.64□□□□□ -1.35
PABPC1-224ENST00000610907 A0A096LNI7 61 aa6.64□□□□□ -1.35
PABPC1-224ENST00000610907 UBE2BP63146 152 aa6.64□□□□□ -1.35
PABPC1-224ENST00000610907 NUPR2A6NF83 97 aa6.63□□□□□ -1.35
PABPC1-224ENST00000610907 TMEM258P61165 79 aa6.63□□□□□ -1.35
PABPC1-224ENST00000610907 C1orf137Q5JT78 98 aa6.63□□□□□ -1.35
PABPC1-224ENST00000610907 BPY2O14599 106 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 ST20-AS1Q8NBB2 130 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 Q8NBF4 154 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 A0A1W2PNM2 257 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 A0A1W2PNN7 141 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 C9orf163Q8N9P6 203 aa6.61□□□□□ -1.35
PABPC1-224ENST00000610907 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
PABPC1-224ENST00000610907 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
PABPC1-224ENST00000610907 H0Y9J4 135 aa6.6□□□□□ -1.35
PABPC1-224ENST00000610907 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
PABPC1-224ENST00000610907 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
PABPC1-224ENST00000610907 F8WEM9 126 aa6.59□□□□□ -1.35
PABPC1-224ENST00000610907 C3orf84H3BNL1 204 aa6.59□□□□□ -1.35
PABPC1-224ENST00000610907 SCXQ7RTU7 201 aa6.59□□□□□ -1.35
PABPC1-224ENST00000610907 SMIM29Q86T20 159 aa6.59□□□□□ -1.35
PABPC1-224ENST00000610907 STAB2Q8WWQ8 2551 aa6.59□□□□□ -1.36
PABPC1-224ENST00000610907 IGLV8-61A0A075B6I0 122 aa6.58□□□□□ -1.36
PABPC1-224ENST00000610907 LRCOL1A6NCL2 159 aa6.58□□□□□ -1.36
PABPC1-224ENST00000610907 IGKV4-1P06312 121 aa6.58□□□□□ -1.36
PABPC1-224ENST00000610907 DNAH9Q9NYC9 4486 aa6.58□□□□□ -1.36
PABPC1-224ENST00000610907 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.57□□□□□ -1.36
PABPC1-224ENST00000610907 KLKP1Q107X0 134 aa6.57□□□□□ -1.36
PABPC1-224ENST00000610907 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
PABPC1-224ENST00000610907 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
PABPC1-224ENST00000610907 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
PABPC1-224ENST00000610907 J3KT08 172 aa6.55□□□□□ -1.36
PABPC1-224ENST00000610907 SPRR1BP22528 89 aa6.55□□□□□ -1.36
PABPC1-224ENST00000610907 Q6ZRN7 208 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-224ENST00000610907 LINC00476Q8WZB0 136 aa6.55□□□□□ -1.36
PABPC1-224ENST00000610907 NDUFC1O43677 76 aa6.53□□□□□ -1.36
PABPC1-224ENST00000610907 PRLHP81277 87 aa6.53□□□□□ -1.36
PABPC1-224ENST00000610907 PHF5AQ7RTV0 110 aaKnown RBP6.53□□□□□ -1.36
PABPC1-224ENST00000610907 HIGD2AQ9BW72 106 aa6.53□□□□□ -1.36
PABPC1-224ENST00000610907 DPH3Q96FX2 82 aa6.52□□□□□ -1.36
PABPC1-224ENST00000610907 COL7A1Q02388 2944 aa6.52□□□□□ -1.36
PABPC1-224ENST00000610907 EPM2AB3EWF7 344 aa6.52□□□□□ -1.37
PABPC1-224ENST00000610907 CHTF8P0CG12 524 aa6.52□□□□□ -1.37
PABPC1-224ENST00000610907 IGFL1Q6UW32 110 aa6.52□□□□□ -1.37
PABPC1-224ENST00000610907 Q8N9L7 120 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms